Gfo_R006432 (Geospiza fortis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gfo_R006432 T283389_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Myb
M00179_2.00 		Mus musculus
HAACGGHHNN
NNDDCCGTTD		 PBM
Badis et al.(2009)
Myb_1047 		0.893 0.978
MYB
M08150_2.00 		Homo sapiens
NNCAACTGHN
NDCAGTTGNN		 ChIP-seq
Mathelier et al.(2014)
MA0100.3 		0.893 0.978
MYB
M09260_2.00 		Homo sapiens
NYAACKGYYDNH
DNHRRCMGTTRN		 Misc
Kulakovskiy et al.(2013)
MYB_HUMAN.H11MO.0.A 		0.893 0.978
Myb
M09261_2.00 		Mus musculus
NYAACKGHHNBN
NVNDDCMGTTRN		 Misc
Kulakovskiy et al.(2013)
MYB_MOUSE.H11MO.0.A 		0.893 0.978
Myb
M09601_2.00 		Mus musculus
YAACBGYC
GRCVGTTR		 Misc
Heinz et al.(2010)
ERMYB-Myb_GSE22095 		0.893 0.978
MYB
M11050_2.00 		Homo sapiens
CMVNCAACBGYCNBYNBV
BVNRVNGRCVGTTGNBKG		 Transfac
Matys et al.(2006)
V$CMYB_01 		0.893 0.978
MYB
M11051_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CMYB_Q5 		0.893 0.978
MYB
M11052_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYB_Q3 		0.893 0.978
MYB
M11053_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYB_Q4 		0.893 0.978
MYB
M11054_2.00 		Homo sapiens
VNNAACKDBB
VVHMGTTNNB		 Transfac
Matys et al.(2006)
V$MYB_Q6 		0.893 0.978
Mybl1
M00180_2.00 		Mus musculus
HAACBGHHN
NDDCVGTTD		 PBM
Badis et al.(2009)
Mybl1_1717 		0.822 0.863
MYBL1
M03349_2.00 		Homo sapiens
BVGTTKAACBGY
RCVGTTMAACBV		 SELEX
Jolma et al.(2013)
MYBL1_1 		0.822 0.863
MYBL1
M03350_2.00 		Homo sapiens
RMVGTTAACGGT
ACCGTTAACBKY		 SELEX
Jolma et al.(2013)
MYBL1_2 		0.822 0.863
MYBL1
M03351_2.00 		Homo sapiens
NHRACCGTTWN
NWAACGGTYDN		 SELEX
Jolma et al.(2013)
MYBL1_3 		0.822 0.863
MYBL1
M03352_2.00 		Homo sapiens
HAACSGHHHHAACBGHC
GDCVGTTDDDDCSGTTD		 SELEX
Jolma et al.(2013)
MYBL1_4 		0.822 0.863
Mybl1
M09262_2.00 		Mus musculus
BBNBYAACBGCCNSB
VSNGGCVGTTRVNVV		 Misc
Kulakovskiy et al.(2013)
MYBA_MOUSE.H11MO.0.C 		0.822 0.863
MYB_AVIMB
M11068_2.00 		Avian myeloblastosis virus
VRYAACKGNH
DNCMGTTRYB		 Transfac
Matys et al.(2006)
V$VMYB_01 		0.684 0.741
MYB_AVIMB
M11069_2.00 		Avian myeloblastosis virus
BVYAACGGH
DCCGTTRBV		 Transfac
Matys et al.(2006)
V$VMYB_02 		0.684 0.741
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R006432 Myb 33 79
Gfo_R006432 Myb 85 130
Gfo_R006432 Myb 136 181

Links

Other Myb/SANT family TFs
Other Geospiza fortis TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pvit_17294 Pogona vitticeps Pvit_17294 I 0.904
MYB Taeniopygia guttata ENSTGUG00000011495 I 0.904
Brh_R005747 Buceros rhinoceros Brh_R005747 I 0.904
ENSPSIG00000011892 Pelodiscus sinensis ENSPSIG00000011892 I 0.904
Tal_R007653 Tyto alba Tal_R007653 I 0.904
MYB Meleagris gallopavo ENSMGAG00000013053 I 0.904
MYB Anolis carolinensis ENSACAG00000009861 I 0.904
Afo_R014904 Aptenodytes forsteri Afo_R014904 I 0.904
Alligator_sinensis_CCG012608.1 Alligator sinensis Alligator_sinensis_CCG012608.1 I 0.904
Aan_R009776 Calypte anna Aan_R009776 I 0.904
Cmyd_10011933 Chelonia mydas Cmyd_10011933 I 0.904
ENSAPLG00000007728 Anas platyrhynchos ENSAPLG00000007728 I 0.904
ENSFALG00000011914 Ficedula albicollis ENSFALG00000011914 I 0.904
ENSLACG00000002813 Latimeria chalumnae ENSLACG00000002813 I 0.902
MYB Gallus gallus ENSGALG00000013956 I 0.902
myb Xenopus tropicalis XB-GENE-867553 I 0.902
XP_002935855 Xenopus tropicalis XP_002935855 I 0.902
MYB Callithrix jacchus ENSCJAG00000007798 I 0.899
MYB Ornithorhynchus anatinus ENSOANG00000002777 I 0.899
ENSSHAG00000014728 Sarcophilus harrisii ENSSHAG00000014728 I 0.899
MYB Monodelphis domestica ENSMODG00000017488 I 0.899
MYB Myotis lucifugus ENSMLUG00000002125 I 0.893
ENSOARG00000014901 Ovis aries ENSOARG00000014901 I 0.893
MYB Loxodonta africana ENSLAFG00000018350 I 0.893
MYB Macaca mulatta ENSMMUG00000018166 I 0.893
MYB Microcebus murinus ENSMICG00000005531 I 0.893
ENSNLEG00000014751 Nomascus leucogenys ENSNLEG00000014751 I 0.893
MYB Oryctolagus cuniculus ENSOCUG00000011633 I 0.893
ENSP00000339992-D1 Bos grunniens ENSP00000339992-D1 I 0.893
MYB Sus scrofa ENSSSCG00000004167 I 0.893
MYB Sorex araneus ENSSARG00000002855 I 0.893
ENSSTOG00000007581 Ictidomys tridecemlineatus ENSSTOG00000007581 I 0.893
ENSTSYG00000014301 Tarsius syrichta ENSTSYG00000014301 I 0.893
MYB Tursiops truncatus ENSTTRG00000003718 I 0.893
MYB Pteropus vampyrus ENSPVAG00000007652 I 0.893
MYB Pan troglodytes ENSPTRG00000018631 I 0.893
MYB Ochotona princeps ENSOPRG00000013639 I 0.893
Myotis_brandtii_MYB_10035701 Myotis brandtii Myotis_brandtii_MYB_10035701 I 0.893
ENSPANG00000018932 Papio anubis ENSPANG00000018932 I 0.893
MYB Procavia capensis ENSPCAG00000009197 I 0.893
ENSP00000339992 Macaca fascicularis ENSP00000339992 I 0.893
MYB Otolemur garnettii ENSOGAG00000000056 I 0.893
Myb Mus musculus ENSMUSG00000019982 D 0.893
MYB Equus caballus ENSECAG00000009918 I 0.893
MYB Erinaceus europaeus ENSEEUG00000001468 I 0.893
MYB Felis catus ENSFCAG00000001812 I 0.893
MYB Homo sapiens ENSG00000118513 D 0.893
MYB Dasypus novemcinctus ENSDNOG00000047370 I 0.893
ENSCSAG00000016815 Chlorocebus sabaeus ENSCSAG00000016815 I 0.893
MYB Canis familiaris ENSCAFG00000000230 I 0.893
MYB Choloepus hoffmanni ENSCHOG00000010472 I 0.893
MYB Cavia porcellus ENSCPOG00000014607 I 0.893
ENSAMEG00000009813 Ailuropoda melanoleuca ENSAMEG00000009813 I 0.893
MYB Bos taurus ENSBTAG00000012074 I 0.893
ENSMPUG00000014814 Mustela putorius furo ENSMPUG00000014814 I 0.889
MYB Tupaia belangeri ENSTBEG00000016454 I 0.877
Myb Rattus norvegicus ENSRNOG00000055858 I 0.875
ENSLOCG00000016218 Lepisosteus oculatus ENSLOCG00000016218 I 0.862
ENSPPYG00000017028 Pongo abelii ENSPPYG00000017028 I 0.861
Ogr08782 Ophisaurus gracilis Ogr08782 I 0.860
myb.S Xenopus laevis XB-GENE-867566 I 0.853
ENSLACG00000011097 Latimeria chalumnae ENSLACG00000011097 I 0.849
ENSAMXG00000004244 Astyanax mexicanus ENSAMXG00000004244 I 0.832
Alligator_sinensis_CCG001232.1 Alligator sinensis Alligator_sinensis_CCG001232.1 I 0.828
Pvit_15001 Pogona vitticeps Pvit_15001 I 0.828
MYBL1 Anolis carolinensis ENSACAG00000016577 I 0.828
Ogr00471 Ophisaurus gracilis Ogr00471 I 0.828
myb Danio rerio ENSDARG00000053666 I 0.826
ENSCSAG00000014195 Chlorocebus sabaeus ENSCSAG00000014195 I 0.822
ENSPPYG00000018640 Pongo abelii ENSPPYG00000018640 I 0.822
MYBL1 Pan troglodytes ENSPTRG00000020308 I 0.822
MYBL1 Sorex araneus ENSSARG00000006938 I 0.822
ENSSHAG00000010559 Sarcophilus harrisii ENSSHAG00000010559 I 0.822
MYBL1 Canis familiaris ENSCAFG00000007344 I 0.822
ENSSTOG00000006634 Ictidomys tridecemlineatus ENSSTOG00000006634 I 0.822
MYBL1 Callithrix jacchus ENSCJAG00000004466 I 0.822
Mybl1 Rattus norvegicus ENSRNOG00000021669 I 0.822
MYBL1 Loxodonta africana ENSLAFG00000004821 I 0.822
ENSP00000385360 Macaca fascicularis ENSP00000385360 I 0.822
MYBL1 Cavia porcellus ENSCPOG00000007578 I 0.822
ENSPSIG00000011935 Pelodiscus sinensis ENSPSIG00000011935 I 0.822
ENSAMEG00000012401 Ailuropoda melanoleuca ENSAMEG00000012401 I 0.822
MYBL1 Felis catus ENSFCAG00000031398 I 0.822
MYBL1 Ornithorhynchus anatinus ENSOANG00000002308 I 0.822
MYBL1 Gorilla gorilla ENSGGOG00000003892 I 0.822
Mybl1 Mus musculus ENSMUSG00000025912 D 0.822
MYBL1 Homo sapiens ENSG00000185697 D 0.822
MYBL1 Myotis lucifugus ENSMLUG00000003166 I 0.822
MYBL1 Macaca mulatta ENSMMUG00000013974 I 0.822
MYBL1 Monodelphis domestica ENSMODG00000007964 I 0.822
MYBL1 Dasypus novemcinctus ENSDNOG00000016860 I 0.822
ENSOARG00000017663 Ovis aries ENSOARG00000017663 I 0.822
MYBL1 Tursiops truncatus ENSTTRG00000017138 I 0.822
Myotis_brandtii_MYBL1_10031628 Myotis brandtii Myotis_brandtii_MYBL1_10031628 I 0.822
MYBL1 Otolemur garnettii ENSOGAG00000004344 I 0.822
MYBL1 Equus caballus ENSECAG00000015959 I 0.822
MYBL1 Vicugna pacos ENSVPAG00000004194 I 0.822
MYBL1 Oryctolagus cuniculus ENSOCUG00000015184 I 0.822
MYBL1 Taeniopygia guttata ENSTGUG00000011289 I 0.819
ENSFALG00000005444 Ficedula albicollis ENSFALG00000005444 I 0.819
Gfo_R002003 Geospiza fortis Gfo_R002003 I 0.819
ENSAPLG00000014596 Anas platyrhynchos ENSAPLG00000014596 I 0.812
Aan_R014924 Calypte anna Aan_R014924 I 0.812
ENSGALG00000015522 Gallus gallus ENSGALG00000015522 I 0.812
Afo_R010364 Aptenodytes forsteri Afo_R010364 I 0.812
MYBL1 Echinops telfairi ENSETEG00000009840 I 0.806
myb Takifugu rubripes ENSTRUG00000016069 I 0.796
myb Tetraodon nigroviridis ENSTNIG00000016319 I 0.796
Tal_R003498 Tyto alba Tal_R003498 I 0.795
mybl1 Danio rerio ENSDARG00000030999 I 0.789
ENSXMAG00000004392 Xiphophorus maculatus ENSXMAG00000004392 I 0.783
ENSPFOG00000011241 Poecilia formosa ENSPFOG00000011241 I 0.783
ENSONIG00000000469 Oreochromis niloticus ENSONIG00000000469 I 0.783
myb Oryzias latipes ENSORLG00000016573 I 0.783
ENSPFOG00000005169 Poecilia formosa ENSPFOG00000005169 I 0.781
ENSXMAG00000001658 Xiphophorus maculatus ENSXMAG00000001658 I 0.781
mybl1 Oryzias latipes ENSORLG00000008488 I 0.781
ENSGMOG00000011856 Gadus morhua ENSGMOG00000011856 I 0.778
Brh_R006445 Buceros rhinoceros Brh_R006445 I 0.775
mybl1 Takifugu rubripes ENSTRUG00000008816 I 0.773
ENSLOCG00000004709 Lepisosteus oculatus ENSLOCG00000004709 I 0.771
mybl1 Tetraodon nigroviridis ENSTNIG00000010104 I 0.765
myb Gasterosteus aculeatus ENSGACG00000011054 I 0.762
ENSAMXG00000013759 Astyanax mexicanus ENSAMXG00000013759 I 0.757
ENSONIG00000014188 Oreochromis niloticus ENSONIG00000014188 I 0.756
ENSPMAG00000001639 Petromyzon marinus ENSPMAG00000001639 I 0.754
ENSPMAG00000000117 Petromyzon marinus ENSPMAG00000000117 I 0.751
estExt_fgenesh2_pg.C_1220090 Branchiostoma floridae estExt_fgenesh2_pg.C_1220090 I 0.744
estExt_fgenesh2_pg.C_1220082 Branchiostoma floridae estExt_fgenesh2_pg.C_1220082 I 0.744
mybl1 Xenopus tropicalis XB-GENE-986560 I 0.741
ENSGMOG00000017106 Gadus morhua ENSGMOG00000017106 I 0.735
mybl1 Gasterosteus aculeatus ENSGACG00000002964 I 0.730
MYB Gorilla gorilla ENSGGOG00000001379 I 0.727
Sakowv30034766m.g Saccoglossus kowalevskii Sakowv30034766m.g I 0.723
MYBL1 Procavia capensis ENSPCAG00000009301 I 0.718
ENSMEUG00000010838 Macropus eugenii ENSMEUG00000010838 I 0.718
MYBL1 Microcebus murinus ENSMICG00000009881 I 0.715
ENSPANG00000008051 Papio anubis ENSPANG00000008051 I 0.710
SMAR001262 Strigamia maritima SMAR001262 I 0.710
mybl1.L Xenopus laevis XB-GENE-986561 I 0.699
MYB_AVIMB Avian myeloblastosis virus MYB_AVIMB D 0.684
ENSLACG00000018995 Latimeria chalumnae ENSLACG00000018995 I 0.682
ENSCING00000018880 Ciona intestinalis ENSCING00000018880 I 0.681
MYBL1 Bos taurus ENSBTAG00000011981 I 0.678
MYBL1 Choloepus hoffmanni ENSCHOG00000012311 I 0.678
Cflo_09641--XP_393231.3_APIME Camponotus floridanus Cflo_09641--XP_393231.3_APIME I 0.672
NEMVEDRAFT_v1g38726 Nematostella vectensis NEMVEDRAFT_v1g38726 I 0.666
MYBL1 Ochotona princeps ENSOPRG00000005971 I 0.665
GB44791 Apis mellifera GB44791 I 0.665