Myb (Rattus norvegicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ENSRNOG00000055858 T270026_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and WD40-repeat domain binding activity. Involved in several processes, including cellular response to retinoic acid; positive regulation of cell population proliferation; and positive regulation of collagen biosynthetic process. Predicted to be located in cytosol and nucleoplasm. Biomarker of transient cerebral ischemia. Orthologous to human MYB (MYB proto-oncogene, transcription factor). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Myb
M00179_2.00 		Mus musculus
HAACGGHHNN
NNDDCCGTTD		 PBM
Badis et al.(2009)
Myb_1047 		0.885 0.964
MYB
M08150_2.00 		Homo sapiens
NNCAACTGHN
NDCAGTTGNN		 ChIP-seq
Mathelier et al.(2014)
MA0100.3 		0.885 0.964
MYB
M09260_2.00 		Homo sapiens
NYAACKGYYDNH
DNHRRCMGTTRN		 Misc
Kulakovskiy et al.(2013)
MYB_HUMAN.H11MO.0.A 		0.885 0.964
Myb
M09261_2.00 		Mus musculus
NYAACKGHHNBN
NVNDDCMGTTRN		 Misc
Kulakovskiy et al.(2013)
MYB_MOUSE.H11MO.0.A 		0.885 0.964
Myb
M09601_2.00 		Mus musculus
YAACBGYC
GRCVGTTR		 Misc
Heinz et al.(2010)
ERMYB-Myb_GSE22095 		0.885 0.964
MYB
M11050_2.00 		Homo sapiens
CMVNCAACBGYCNBYNBV
BVNRVNGRCVGTTGNBKG		 Transfac
Matys et al.(2006)
V$CMYB_01 		0.885 0.964
MYB
M11051_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CMYB_Q5 		0.885 0.964
MYB
M11052_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYB_Q3 		0.885 0.964
MYB
M11053_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYB_Q4 		0.885 0.964
MYB
M11054_2.00 		Homo sapiens
VNNAACKDBB
VVHMGTTNNB		 Transfac
Matys et al.(2006)
V$MYB_Q6 		0.885 0.964
Mybl1
M00180_2.00 		Mus musculus
HAACBGHHN
NDDCVGTTD		 PBM
Badis et al.(2009)
Mybl1_1717 		0.820 0.857
MYBL1
M03349_2.00 		Homo sapiens
BVGTTKAACBGY
RCVGTTMAACBV		 SELEX
Jolma et al.(2013)
MYBL1_1 		0.820 0.857
MYBL1
M03350_2.00 		Homo sapiens
RMVGTTAACGGT
ACCGTTAACBKY		 SELEX
Jolma et al.(2013)
MYBL1_2 		0.820 0.857
MYBL1
M03351_2.00 		Homo sapiens
NHRACCGTTWN
NWAACGGTYDN		 SELEX
Jolma et al.(2013)
MYBL1_3 		0.820 0.857
MYBL1
M03352_2.00 		Homo sapiens
HAACSGHHHHAACBGHC
GDCVGTTDDDDCSGTTD		 SELEX
Jolma et al.(2013)
MYBL1_4 		0.820 0.857
Mybl1
M09262_2.00 		Mus musculus
BBNBYAACBGCCNSB
VSNGGCVGTTRVNVV		 Misc
Kulakovskiy et al.(2013)
MYBA_MOUSE.H11MO.0.C 		0.820 0.857
MYB_AVIMB
M11068_2.00 		Avian myeloblastosis virus
VRYAACKGNH
DNCMGTTRYB		 Transfac
Matys et al.(2006)
V$VMYB_01 		0.671 0.721
MYB_AVIMB
M11069_2.00 		Avian myeloblastosis virus
BVYAACGGH
DCCGTTRBV		 Transfac
Matys et al.(2006)
V$VMYB_02 		0.671 0.721
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000069389 Myb 33 79
ENSRNOP00000069389 Myb 85 131
ENSRNOP00000069389 Myb 137 182
ENSRNOP00000072163 Myb 33 79
ENSRNOP00000072163 Myb 85 131
ENSRNOP00000072163 Myb 137 182

Links

Other Myb/SANT family TFs
Other Rattus norvegicus TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB Felis catus ENSFCAG00000001812 I 0.885
MYB Sorex araneus ENSSARG00000002855 I 0.885
MYB Homo sapiens ENSG00000118513 D 0.885
ENSOARG00000014901 Ovis aries ENSOARG00000014901 I 0.885
MYB Erinaceus europaeus ENSEEUG00000001468 I 0.885
MYB Sus scrofa ENSSSCG00000004167 I 0.885
MYB Dasypus novemcinctus ENSDNOG00000047370 I 0.885
MYB Microcebus murinus ENSMICG00000005531 I 0.885
ENSSHAG00000014728 Sarcophilus harrisii ENSSHAG00000014728 I 0.885
MYB Ornithorhynchus anatinus ENSOANG00000002777 I 0.885
ENSP00000339992 Macaca fascicularis ENSP00000339992 I 0.885
MYB Pan troglodytes ENSPTRG00000018631 I 0.885
MYB Loxodonta africana ENSLAFG00000018350 I 0.885
MYB Myotis lucifugus ENSMLUG00000002125 I 0.885
Myotis_brandtii_MYB_10035701 Myotis brandtii Myotis_brandtii_MYB_10035701 I 0.885
MYB Macaca mulatta ENSMMUG00000018166 I 0.885
MYB Monodelphis domestica ENSMODG00000017488 I 0.885
MYB Pteropus vampyrus ENSPVAG00000007652 I 0.885
ENSNLEG00000014751 Nomascus leucogenys ENSNLEG00000014751 I 0.885
Myb Mus musculus ENSMUSG00000019982 D 0.885
MYB Oryctolagus cuniculus ENSOCUG00000011633 I 0.885
MYB Equus caballus ENSECAG00000009918 I 0.885
MYB Procavia capensis ENSPCAG00000009197 I 0.885
MYB Bos taurus ENSBTAG00000012074 I 0.885
ENSSTOG00000007581 Ictidomys tridecemlineatus ENSSTOG00000007581 I 0.885
ENSTSYG00000014301 Tarsius syrichta ENSTSYG00000014301 I 0.885
MYB Tursiops truncatus ENSTTRG00000003718 I 0.885
ENSPANG00000018932 Papio anubis ENSPANG00000018932 I 0.885
ENSP00000339992-D1 Bos grunniens ENSP00000339992-D1 I 0.885
ENSAMEG00000009813 Ailuropoda melanoleuca ENSAMEG00000009813 I 0.885
MYB Ochotona princeps ENSOPRG00000013639 I 0.885
MYB Choloepus hoffmanni ENSCHOG00000010472 I 0.885
MYB Canis familiaris ENSCAFG00000000230 I 0.885
MYB Otolemur garnettii ENSOGAG00000000056 I 0.885
MYB Cavia porcellus ENSCPOG00000014607 I 0.885
ENSCSAG00000016815 Chlorocebus sabaeus ENSCSAG00000016815 I 0.885
MYB Callithrix jacchus ENSCJAG00000007798 I 0.885
ENSMPUG00000014814 Mustela putorius furo ENSMPUG00000014814 I 0.881
ENSPSIG00000011892 Pelodiscus sinensis ENSPSIG00000011892 I 0.880
Pvit_17294 Pogona vitticeps Pvit_17294 I 0.880
Cmyd_10011933 Chelonia mydas Cmyd_10011933 I 0.880
Tal_R007653 Tyto alba Tal_R007653 I 0.880
MYB Meleagris gallopavo ENSMGAG00000013053 I 0.880
Aan_R009776 Calypte anna Aan_R009776 I 0.880
MYB Taeniopygia guttata ENSTGUG00000011495 I 0.880
Brh_R005747 Buceros rhinoceros Brh_R005747 I 0.880
ENSFALG00000011914 Ficedula albicollis ENSFALG00000011914 I 0.880
Afo_R014904 Aptenodytes forsteri Afo_R014904 I 0.880
ENSAPLG00000007728 Anas platyrhynchos ENSAPLG00000007728 I 0.880
MYB Anolis carolinensis ENSACAG00000009861 I 0.880
Alligator_sinensis_CCG012608.1 Alligator sinensis Alligator_sinensis_CCG012608.1 I 0.880
MYB Gallus gallus ENSGALG00000013956 I 0.877
ENSLACG00000002813 Latimeria chalumnae ENSLACG00000002813 I 0.877
XP_002935855 Xenopus tropicalis XP_002935855 I 0.877
myb Xenopus tropicalis XB-GENE-867553 I 0.877
Gfo_R006432 Geospiza fortis Gfo_R006432 I 0.875
MYB Tupaia belangeri ENSTBEG00000016454 I 0.869
ENSPPYG00000017028 Pongo abelii ENSPPYG00000017028 I 0.853
ENSLACG00000011097 Latimeria chalumnae ENSLACG00000011097 I 0.847
ENSLOCG00000016218 Lepisosteus oculatus ENSLOCG00000016218 I 0.837
Ogr08782 Ophisaurus gracilis Ogr08782 I 0.835
myb.S Xenopus laevis XB-GENE-867566 I 0.829
Alligator_sinensis_CCG001232.1 Alligator sinensis Alligator_sinensis_CCG001232.1 I 0.826
MYBL1 Anolis carolinensis ENSACAG00000016577 I 0.821
Pvit_15001 Pogona vitticeps Pvit_15001 I 0.821
Ogr00471 Ophisaurus gracilis Ogr00471 I 0.821
ENSPSIG00000011935 Pelodiscus sinensis ENSPSIG00000011935 I 0.820
MYBL1 Tursiops truncatus ENSTTRG00000017138 I 0.820
MYBL1 Vicugna pacos ENSVPAG00000004194 I 0.820
ENSPPYG00000018640 Pongo abelii ENSPPYG00000018640 I 0.820
MYBL1 Pan troglodytes ENSPTRG00000020308 I 0.820
ENSSHAG00000010559 Sarcophilus harrisii ENSSHAG00000010559 I 0.820
ENSSTOG00000006634 Ictidomys tridecemlineatus ENSSTOG00000006634 I 0.820
Mybl1 Rattus norvegicus ENSRNOG00000021669 I 0.820
MYBL1 Sorex araneus ENSSARG00000006938 I 0.820
MYBL1 Macaca mulatta ENSMMUG00000013974 I 0.820
MYBL1 Cavia porcellus ENSCPOG00000007578 I 0.820
MYBL1 Gorilla gorilla ENSGGOG00000003892 I 0.820
Myotis_brandtii_MYBL1_10031628 Myotis brandtii Myotis_brandtii_MYBL1_10031628 I 0.820
MYBL1 Loxodonta africana ENSLAFG00000004821 I 0.820
MYBL1 Homo sapiens ENSG00000185697 D 0.820
MYBL1 Felis catus ENSFCAG00000031398 I 0.820
MYBL1 Equus caballus ENSECAG00000015959 I 0.820
ENSCSAG00000014195 Chlorocebus sabaeus ENSCSAG00000014195 I 0.820
ENSP00000385360 Macaca fascicularis ENSP00000385360 I 0.820
MYBL1 Dasypus novemcinctus ENSDNOG00000016860 I 0.820
MYBL1 Callithrix jacchus ENSCJAG00000004466 I 0.820
MYBL1 Canis familiaris ENSCAFG00000007344 I 0.820
MYBL1 Oryctolagus cuniculus ENSOCUG00000015184 I 0.820
MYBL1 Otolemur garnettii ENSOGAG00000004344 I 0.820
ENSOARG00000017663 Ovis aries ENSOARG00000017663 I 0.820
MYBL1 Myotis lucifugus ENSMLUG00000003166 I 0.820
MYBL1 Monodelphis domestica ENSMODG00000007964 I 0.820
Mybl1 Mus musculus ENSMUSG00000025912 D 0.820
MYBL1 Ornithorhynchus anatinus ENSOANG00000002308 I 0.820
ENSAMEG00000012401 Ailuropoda melanoleuca ENSAMEG00000012401 I 0.820
MYBL1 Taeniopygia guttata ENSTGUG00000011289 I 0.817
ENSFALG00000005444 Ficedula albicollis ENSFALG00000005444 I 0.817
Gfo_R002003 Geospiza fortis Gfo_R002003 I 0.817
Aan_R014924 Calypte anna Aan_R014924 I 0.810
Afo_R010364 Aptenodytes forsteri Afo_R010364 I 0.810
ENSAPLG00000014596 Anas platyrhynchos ENSAPLG00000014596 I 0.810
ENSGALG00000015522 Gallus gallus ENSGALG00000015522 I 0.810
ENSAMXG00000004244 Astyanax mexicanus ENSAMXG00000004244 I 0.808
myb Danio rerio ENSDARG00000053666 I 0.802
MYBL1 Echinops telfairi ENSETEG00000009840 I 0.798
Tal_R003498 Tyto alba Tal_R003498 I 0.793
mybl1 Danio rerio ENSDARG00000030999 I 0.781
myb Tetraodon nigroviridis ENSTNIG00000016319 I 0.778
myb Takifugu rubripes ENSTRUG00000016069 I 0.778
Brh_R006445 Buceros rhinoceros Brh_R006445 I 0.773
mybl1 Takifugu rubripes ENSTRUG00000008816 I 0.771
ENSLOCG00000004709 Lepisosteus oculatus ENSLOCG00000004709 I 0.769
ENSONIG00000000469 Oreochromis niloticus ENSONIG00000000469 I 0.765
ENSPFOG00000011241 Poecilia formosa ENSPFOG00000011241 I 0.765
ENSXMAG00000004392 Xiphophorus maculatus ENSXMAG00000004392 I 0.765
myb Oryzias latipes ENSORLG00000016573 I 0.765
mybl1 Tetraodon nigroviridis ENSTNIG00000010104 I 0.763
ENSPFOG00000005169 Poecilia formosa ENSPFOG00000005169 I 0.757
ENSXMAG00000001658 Xiphophorus maculatus ENSXMAG00000001658 I 0.757
mybl1 Oryzias latipes ENSORLG00000008488 I 0.757
ENSGMOG00000011856 Gadus morhua ENSGMOG00000011856 I 0.755
ENSPMAG00000001639 Petromyzon marinus ENSPMAG00000001639 I 0.753
ENSAMXG00000013759 Astyanax mexicanus ENSAMXG00000013759 I 0.749
ENSONIG00000014188 Oreochromis niloticus ENSONIG00000014188 I 0.748
myb Gasterosteus aculeatus ENSGACG00000011054 I 0.741
mybl1 Xenopus tropicalis XB-GENE-986560 I 0.739
ENSGMOG00000017106 Gadus morhua ENSGMOG00000017106 I 0.733
ENSMEUG00000010838 Macropus eugenii ENSMEUG00000010838 I 0.733
MYBL1 Procavia capensis ENSPCAG00000009301 I 0.733
ENSPMAG00000000117 Petromyzon marinus ENSPMAG00000000117 I 0.732
estExt_fgenesh2_pg.C_1220082 Branchiostoma floridae estExt_fgenesh2_pg.C_1220082 I 0.732
estExt_fgenesh2_pg.C_1220090 Branchiostoma floridae estExt_fgenesh2_pg.C_1220090 I 0.732
mybl1 Gasterosteus aculeatus ENSGACG00000002964 I 0.716
MYB Gorilla gorilla ENSGGOG00000001379 I 0.714
MYBL1 Microcebus murinus ENSMICG00000009881 I 0.713
Sakowv30034766m.g Saccoglossus kowalevskii Sakowv30034766m.g I 0.709
ENSPANG00000008051 Papio anubis ENSPANG00000008051 I 0.708
SMAR001262 Strigamia maritima SMAR001262 I 0.702
mybl1.L Xenopus laevis XB-GENE-986561 I 0.697
ENSLACG00000018995 Latimeria chalumnae ENSLACG00000018995 I 0.675
MYB_AVIMB Avian myeloblastosis virus MYB_AVIMB D 0.671
ENSCING00000018880 Ciona intestinalis ENSCING00000018880 I 0.669
MYBL1 Choloepus hoffmanni ENSCHOG00000012311 I 0.665
MYBL1 Bos taurus ENSBTAG00000011981 I 0.665