MDP0000244794 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000244794 T288475_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05732.1
M01276_2.00 		Cannabis sativa
HNATTCBNN
NNVGAATND		 PBM
Lambert et al.(2019)
pTH11367 		0.752 0.851
PHR1
M02302_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7249 		0.676 0.702
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.665 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000244794 Myb 33 84

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm014775 Prunus mume Pm014775 I 0.855
PRUPE_ppa023518mg Prunus persica PRUPE_ppa023518mg I 0.801
POPTR_0002s05770 Populus trichocarpa POPTR_0002s05770 I 0.792
PK05732.1 Cannabis sativa PK05732.1 D 0.752
MLOC_56821 Hordeum vulgare MLOC_56821 I 0.746
SapurV1A.0429s0100 Salix purpurea SapurV1A.0429s0100 I 0.733
SapurV1A.3361s0010 Salix purpurea SapurV1A.3361s0010 I 0.733
chr5.LjT14K23.60.nc Lotus japonicus chr5.LjT14K23.60.nc I 0.729
TCM_001942 Theobroma cacao TCM_001942 I 0.725
Bostr.24340s0004 Boechera stricta Bostr.24340s0004 I 0.725
Eucgr.A02031 Eucalyptus grandis Eucgr.A02031 I 0.722
GLYMA20G24290 Glycine max GLYMA20G24290 I 0.711
GRMZM2G069525 Zea mays GRMZM2G069525 I 0.711
SapurV1A.0354s0280 Salix purpurea SapurV1A.0354s0280 I 0.708
Carubv10003097m.g Capsella rubella Carubv10003097m.g I 0.707
Bo2g104640 Brassica oleracea Bo2g104640 I 0.707
POPTR_0018s14830 Populus trichocarpa POPTR_0018s14830 I 0.707
Cagra.4137s0009 Capsella grandiflora Cagra.4137s0009 I 0.707
Bostr.7199s0006 Boechera stricta Bostr.7199s0006 I 0.707
AT4G04605 Arabidopsis thaliana AT4G04605 I 0.707
Eucgr.D01346 Eucalyptus grandis Eucgr.D01346 I 0.706
gene19641-v1.0-hybrid Fragaria vesca gene19641-v1.0-hybrid I 0.700
LjSGA_025887.1 Lotus japonicus LjSGA_025887.1 N 0.700
PGSC0003DMG400000922 Solanum tuberosum PGSC0003DMG400000922 I 0.699
Lus10001149.g Linum usitatissimum Lus10001149.g I 0.691
Thhalv10017090m.g Eutrema salsugineum Thhalv10017090m.g I 0.691
cassava11204.m1 Manihot esculenta cassava11204.m1 I 0.686
Bra026618 Brassica rapa Bra026618 I 0.683
AT2G02060 Arabidopsis thaliana AT2G02060 I 0.683
Bostr.0556s0031 Boechera stricta Bostr.0556s0031 I 0.683
Carubv10017538m.g Capsella rubella Carubv10017538m.g I 0.683
fgenesh2_kg.5__121__AT2G02060.1 Arabidopsis lyrata fgenesh2_kg.5__121__AT2G02060.1 I 0.683
Thhalv10004791m.g Eutrema salsugineum Thhalv10004791m.g I 0.683
Cagra.0549s0004 Capsella grandiflora Cagra.0549s0004 I 0.683
PGSC0003DMG400028830 Solanum tuberosum PGSC0003DMG400028830 I 0.681
Solyc12g006280.1 Solanum lycopersicum Solyc12g006280.1 I 0.681
Bra024836 Brassica rapa Bra024836 I 0.677
Bo7g080160 Brassica oleracea Bo7g080160 I 0.677
Bo2g134900 Brassica oleracea Bo2g134900 I 0.676
Bo8g054450 Brassica oleracea Bo8g054450 I 0.676
Bostr.7867s0704 Boechera stricta Bostr.7867s0704 I 0.676
Cagra.1225s0029 Capsella grandiflora Cagra.1225s0029 I 0.676
Bra010355 Brassica rapa Bra010355 I 0.676
Thhalv10025330m.g Eutrema salsugineum Thhalv10025330m.g I 0.676
PHR1 Arabidopsis lyrata fgenesh2_kg.7__1335__AT4G28610.1 I 0.676
PHR1 Arabidopsis thaliana AT4G28610 D 0.676
Lus10029808.g Linum usitatissimum Lus10029808.g I 0.674
PDK_20s1498711g001 Phoenix dactylifera PDK_20s1498711g001 I 0.673
GLYMA15G11576 Glycine max GLYMA15G11576 I 0.673
Gorai.010G181100 Gossypium raimondii Gorai.010G181100 I 0.673
orange1.1g029903m.g Citrus sinensis orange1.1g029903m.g I 0.673
Ciclev10032941m.g Citrus clementina Ciclev10032941m.g I 0.673
GLYMA09G00685 Glycine max GLYMA09G00685 I 0.673
POPTR_0004s01060 Populus trichocarpa POPTR_0004s01060 I 0.673
Solyc02g080860.1 Solanum lycopersicum Solyc02g080860.1 I 0.673
cassava15362.m1 Manihot esculenta cassava15362.m1 I 0.673
PRUPE_ppa015662mg Prunus persica PRUPE_ppa015662mg I 0.673
Ca_00645 Cicer arietinum Ca_00645 I 0.673
TCM_030248 Theobroma cacao TCM_030248 I 0.673
29842.m003572 Ricinus communis 29842.m003572 I 0.673
POPTR_0010s10990 Populus trichocarpa POPTR_0010s10990 I 0.669
GSMUA_Achr5G19200_001 Musa acuminata GSMUA_Achr5G19200_001 I 0.669
PGSC0003DMG400029440 Solanum tuberosum PGSC0003DMG400029440 I 0.669
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I 0.667
VIT_13s0067g01500 Vitis vinifera VIT_13s0067g01500 I 0.667
mgf023762m Mimulus guttatus mgf023762m I 0.667
Pavir.Aa00827 Panicum virgatum Pavir.Aa00827 I 0.666
GRMZM2G106185 Zea mays GRMZM2G106185 I 0.666
Pavir.Ab02674 Panicum virgatum Pavir.Ab02674 I 0.666
Thhalv10008620m.g Eutrema salsugineum Thhalv10008620m.g I 0.665
Cagra.4137s0013 Capsella grandiflora Cagra.4137s0013 N 0.665
GRMZM2G010920 Zea mays GRMZM2G010920 I 0.665
Bo5g019810 Brassica oleracea Bo5g019810 I 0.665
fgenesh2_kg.1__1592__AT1G14600.1 Arabidopsis lyrata fgenesh2_kg.1__1592__AT1G14600.1 I 0.665
GLYMA14G03527 Glycine max GLYMA14G03527 I 0.665
MTR_2g016220 Medicago truncatula MTR_2g016220 I 0.665
MTR_2g023580 Medicago truncatula MTR_2g023580 I 0.665
AT1G14600 Arabidopsis thaliana AT1G14600 D 0.665
MDP0000214282 Malus domestica MDP0000214282 I 0.665
Cagra.3501s0036 Capsella grandiflora Cagra.3501s0036 I 0.665
Bra026202 Brassica rapa Bra026202 I 0.665
Carubv10010057m.g Capsella rubella Carubv10010057m.g I 0.665
MDP0000196504 Malus domestica MDP0000196504 I 0.665
POPTR_0021s00430 Populus trichocarpa POPTR_0021s00430 I 0.662
GLYMA18G14071 Glycine max GLYMA18G14071 I 0.661