Pavir.Ga01503 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ga01503 T289218_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga01503.1.p Myb 48 96
Pavir.Ga01503.2.p Myb 48 96

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si010917m.g Setaria italica Si010917m.g N 0.909
OPUNC04G15120 Oryza punctata OPUNC04G15120 N 0.891
ONIVA04G15620 Oryza nivara ONIVA04G15620 N 0.880
OGLUM04G17350 Oryza glumaepatula OGLUM04G17350 N 0.880
OMERI04G14610 Oryza meridionalis OMERI04G14610 N 0.880
ORUFI04G18740 Oryza rufipogon ORUFI04G18740 N 0.880
BGIOSGA014805 Oryza indica BGIOSGA014805 N 0.880
OBART04G17310 Oryza barthii OBART04G17310 N 0.880
ORGLA04G0144300 Oryza glaberrima ORGLA04G0144300 N 0.880
OLONG_009317 Oryza longistaminata OLONG_009317 N 0.880
Pavir.J08977 Panicum virgatum Pavir.J08977 N 0.866
Sb06g021360 Sorghum bicolor Sb06g021360 N 0.860
LPERR04G13890 Leersia perrieri LPERR04G13890 N 0.845
Traes_2DL_B72450387 Triticum aestivum Traes_2DL_B72450387 N 0.832
F775_32546 Aegilops tauschii F775_32546 N 0.832
Traes_2BL_7B5109B55 Triticum aestivum Traes_2BL_7B5109B55 N 0.832
Traes_2AL_6990211D0 Triticum aestivum Traes_2AL_6990211D0 N 0.823
GRMZM2G053557 Zea mays GRMZM2G053557 N 0.808
POPTR_0014s17210 Populus trichocarpa POPTR_0014s17210 N 0.755
orange1.1g024388m.g Citrus sinensis orange1.1g024388m.g N 0.738
Gorai.007G162200 Gossypium raimondii Gorai.007G162200 N 0.736
TCM_002550 Theobroma cacao TCM_002550 N 0.733
Ciclev10016354m.g Citrus clementina Ciclev10016354m.g N 0.731
mgf025428m Mimulus guttatus mgf025428m N 0.727
30005.m001261 Ricinus communis 30005.m001261 N 0.722
Cla012999 Citrullus lanatus Cla012999 N 0.711
GSMUA_Achr3G19260_001 Musa acuminata GSMUA_Achr3G19260_001 N 0.707
Solyc08g013980.2 Solanum lycopersicum Solyc08g013980.2 N 0.686
PGSC0003DMG400020996 Solanum tuberosum PGSC0003DMG400020996 N 0.686
cassava24109.valid.m1 Manihot esculenta cassava24109.valid.m1 N 0.681
Gorai.N001000 Gossypium raimondii Gorai.N001000 N 0.673
orange1.1g025458m.g Citrus sinensis orange1.1g025458m.g N 0.672
Ciclev10021850m.g Citrus clementina Ciclev10021850m.g N 0.672
Lus10025582.g Linum usitatissimum Lus10025582.g N 0.668
Lus10027045.g Linum usitatissimum Lus10027045.g N 0.668
Gorai.004G060500 Gossypium raimondii Gorai.004G060500 N 0.668
GSMUA_Achr6G28720_001 Musa acuminata GSMUA_Achr6G28720_001 N 0.668
Lus10025581.g Linum usitatissimum Lus10025581.g N 0.668
Bo3g061340 Brassica oleracea Bo3g061340 N 0.667
Bo1g147290 Brassica oleracea Bo1g147290 N 0.667
Thhalv10021333m.g Eutrema salsugineum Thhalv10021333m.g N 0.667
Bra029658 Brassica rapa Bra029658 N 0.667
Bra040015 Brassica rapa Bra040015 N 0.667
Bra001258 Brassica rapa Bra001258 N 0.667
TCM_019960 Theobroma cacao TCM_019960 N 0.661
TCM_019968 Theobroma cacao TCM_019968 N 0.661