Bra019599 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra019599 T292596_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC062
M00977_2.00 		Arabidopsis thaliana
NTTMCTTAV
BTAAGKAAN		 PBM
Lindemose et al.(2014)
NTL6 		0.922 0.860
NAC062
M07212_2.00 		Arabidopsis thaliana
CTTMNHNNBYAAGNWWHN
NDWWNCTTRVNNDNKAAG		 Dap-seq
OMalley et al.(2016)
ANAC062_colamp_a 		0.922 0.860
NAC062
M07213_2.00 		Arabidopsis thaliana
TNCTTMDBNNBYAAG
CTTRVNNVHKAAGNA		 Dap-seq
OMalley et al.(2016)
ANAC062_col 		0.922 0.860
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra019599.1-P NAC/NAM 14 141

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.6864s0295 Boechera stricta Bostr.6864s0295 I 0.947
ANAC062 Arabidopsis lyrata scaffold_501948.1 I 0.946
Cagra.1838s0033 Capsella grandiflora Cagra.1838s0033 I 0.943
Bo3g109540 Brassica oleracea Bo3g109540 I 0.943
Carubv10017199m.g Capsella rubella Carubv10017199m.g I 0.943
Thhalv10010340m.g Eutrema salsugineum Thhalv10010340m.g I 0.939
Bra017980 Brassica rapa Bra017980 I 0.930
Bo8g077840 Brassica oleracea Bo8g077840 I 0.930
NAC062 Arabidopsis thaliana AT3G49530 D 0.922
Carubv10000892m.g Capsella rubella Carubv10000892m.g N 0.891
Thhalv10004105m.g Eutrema salsugineum Thhalv10004105m.g N 0.890
NAC091 Arabidopsis thaliana AT5G24590 N 0.889
ANAC091 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001968 N 0.889
Cagra.21346s0001 Capsella grandiflora Cagra.21346s0001 N 0.889