CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB12G11500
(
Oryza brachyantha
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
OB12G11500
T293939_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Traes_5BL_CC18CAD72
M11085_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC691_01
0.948
0.857
NAC029
M00973_2.00
Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN
PBM
Lindemose et al.(2014)
NAP
0.872
0.768
NAC029
M02369_2.00
Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN
PBM
Weirauch et al.(2014)
pTH8397
0.872
0.768
NAC029
M07180_2.00
Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN
Dap-seq
OMalley et al.(2016)
NAP_colamp_a
0.872
0.768
NAC029
M07181_2.00
Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW
Dap-seq
OMalley et al.(2016)
NAP_col_v3a
0.872
0.768
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB12G11500.1
NAC/NAM
7
133
PPGFRFHPTDEELIVHYLMNQAASMACPVPIIAEVNIYKCNPWDLPAKALFGEKEWYFFSPRDRKYPNGARPNRAAGSGYWKATGTDKAILATPTSHSIAVKKALVFYKGKPPKGLKTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Oryza brachyantha
TFs
113 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB11G11210
Oryza brachyantha
OB11G11210
I
0.965
OPUNC11G01330
Oryza punctata
OPUNC11G01330
I
0.959
OPUNC12G01370
Oryza punctata
OPUNC12G01370
I
0.959
Si010410m.g
Setaria italica
Si010410m.g
I
0.957
Si026530m.g
Setaria italica
Si026530m.g
I
0.956
Sb08g001940
Sorghum bicolor
Sb08g001940
I
0.955
Pavir.J23516
Panicum virgatum
Pavir.J23516
I
0.954
Sb05g001580
Sorghum bicolor
Sb05g001580
I
0.949
Traes_5BL_CC18CAD72
Triticum aestivum
Traes_5BL_CC18CAD72
D
0.948
F775_26965
Aegilops tauschii
F775_26965
I
0.948
MLOC_4747
Hordeum vulgare
MLOC_4747
I
0.948
OBART12G01290
Oryza barthii
OBART12G01290
I
0.947
OBART11G01590
Oryza barthii
OBART11G01590
I
0.947
OS12G0123700
Oryza sativa
OS12G0123700
I
0.947
OGLUM11G01310
Oryza glumaepatula
OGLUM11G01310
I
0.947
OGLUM12G01870
Oryza glumaepatula
OGLUM12G01870
I
0.947
OS11G0126900
Oryza sativa
OS11G0126900
I
0.947
ONIVA11G01630
Oryza nivara
ONIVA11G01630
I
0.947
OLONG_026749
Oryza longistaminata
OLONG_026749
I
0.947
ORGLA12G0011400
Oryza glaberrima
ORGLA12G0011400
I
0.947
BGIOSGA034713
Oryza indica
BGIOSGA034713
I
0.947
BGIOSGA036918
Oryza indica
BGIOSGA036918
I
0.947
BGIOSGA036920
Oryza indica
BGIOSGA036920
I
0.947
OLONG_020632
Oryza longistaminata
OLONG_020632
I
0.946
OMERI12G00480
Oryza meridionalis
OMERI12G00480
I
0.939
GRMZM2G127379
Zea mays
GRMZM2G127379
I
0.927
ORUFI12G01570
Oryza rufipogon
ORUFI12G01570
I
0.926
LPERR12G01440
Leersia perrieri
LPERR12G01440
I
0.906
GSMUA_Achr6G32320_001
Musa acuminata
GSMUA_Achr6G32320_001
I
0.905
GSMUA_AchrUn_randomG17360_001
Musa acuminata
GSMUA_AchrUn_randomG17360_001
I
0.904
LPERR11G01300
Leersia perrieri
LPERR11G01300
I
0.902
GSMUA_Achr3G18010_001
Musa acuminata
GSMUA_Achr3G18010_001
I
0.899
chr1.CM0104.240.nc
Lotus japonicus
chr1.CM0104.240.nc
I
0.895
GRMZM2G430849
Zea mays
GRMZM2G430849
I
0.894
Pavir.J23256
Panicum virgatum
Pavir.J23256
I
0.894
Si030267m.g
Setaria italica
Si030267m.g
I
0.893
Lus10037156.g
Linum usitatissimum
Lus10037156.g
I
0.892
Pavir.Ea00837
Panicum virgatum
Pavir.Ea00837
I
0.892
Lus10036773.g
Linum usitatissimum
Lus10036773.g
I
0.891
Gorai.005G142300
Gossypium raimondii
Gorai.005G142300
I
0.889
mgf022118m
Mimulus guttatus
mgf022118m
I
0.889
Ciclev10032304m.g
Citrus clementina
Ciclev10032304m.g
I
0.889
MDP0000481448
Malus domestica
MDP0000481448
I
0.889
orange1.1g023197m.g
Citrus sinensis
orange1.1g023197m.g
I
0.889
Pm006470
Prunus mume
Pm006470
I
0.888
GRMZM2G109627
Zea mays
GRMZM2G109627
I
0.888
PRUPE_ppa009530mg
Prunus persica
PRUPE_ppa009530mg
I
0.888
AMTR_s00119p00040230
Amborella trichopoda
AMTR_s00119p00040230
I
0.887
NAP
Vitis vinifera
VIT_01s0026g02710
I
0.887
SELMODRAFT_47266
Selaginella moellendorffii
SELMODRAFT_47266
I
0.887
SELMODRAFT_133982
Selaginella moellendorffii
SELMODRAFT_133982
I
0.887
Gorai.008G179900
Gossypium raimondii
Gorai.008G179900
I
0.886
Cla010367
Citrullus lanatus
Cla010367
I
0.886
Cucsa.284890
Cucumis sativus
Cucsa.284890
I
0.886
PK25119.1
Cannabis sativa
PK25119.1
I
0.885
Pavir.Bb03737
Panicum virgatum
Pavir.Bb03737
I
0.883
Eucgr.G02486
Eucalyptus grandis
Eucgr.G02486
I
0.883
29813.m001519
Ricinus communis
29813.m001519
I
0.883
PGSC0003DMG400002824
Solanum tuberosum
PGSC0003DMG400002824
I
0.882
GRMZM2G312201
Zea mays
GRMZM2G312201
N
0.882
cassava1317.valid.m1
Manihot esculenta
cassava1317.valid.m1
I
0.882
SapurV1A.0801s0090
Salix purpurea
SapurV1A.0801s0090
I
0.881
GSMUA_Achr10G12860_001
Musa acuminata
GSMUA_Achr10G12860_001
I
0.881
TCM_011671
Theobroma cacao
TCM_011671
I
0.879
MDP0000262990
Malus domestica
MDP0000262990
I
0.878
OPUNC07G07310
Oryza punctata
OPUNC07G07310
I
0.878
PGSC0003DMG400018435
Solanum tuberosum
PGSC0003DMG400018435
I
0.878
Pavir.J22666
Panicum virgatum
Pavir.J22666
I
0.878
e_gw1.15.275.1
Physcomitrella patens
e_gw1.15.275.1
I
0.877
POPTR_0008s08850
Populus trichocarpa
POPTR_0008s08850
I
0.877
OB07G15670
Oryza brachyantha
OB07G15670
I
0.876
PGSC0003DMG400017567
Solanum tuberosum
PGSC0003DMG400017567
I
0.876
GLYMA02G12220
Glycine max
GLYMA02G12220
I
0.876
BRADI1G17480
Brachypodium distachyon
BRADI1G17480
I
0.876
GSMUA_Achr6G32330_001
Musa acuminata
GSMUA_Achr6G32330_001
I
0.875
Sb02g043210
Sorghum bicolor
Sb02g043210
I
0.875
e_gw1.259.28.1
Physcomitrella patens
e_gw1.259.28.1
I
0.874
MTR_4g081870
Medicago truncatula
MTR_4g081870
I
0.874
GLYMA19G28476
Glycine max
GLYMA19G28476
I
0.874
GLYMA01G06150
Glycine max
GLYMA01G06150
I
0.874
Lus10030446.g
Linum usitatissimum
Lus10030446.g
I
0.873
GLYMA07G35630
Glycine max
GLYMA07G35630
I
0.873
Sb03g037940
Sorghum bicolor
Sb03g037940
I
0.873
OMERI07G23240
Oryza meridionalis
OMERI07G23240
I
0.873
Lus10026617.g
Linum usitatissimum
Lus10026617.g
I
0.873
GRMZM2G068973
Zea mays
GRMZM2G068973
I
0.873
ORUFI07G27590
Oryza rufipogon
ORUFI07G27590
I
0.873
BGIOSGA026407
Oryza indica
BGIOSGA026407
I
0.873
OGLUM07G26640
Oryza glumaepatula
OGLUM07G26640
I
0.873
OBART07G26600
Oryza barthii
OBART07G26600
I
0.873
ORGLA07G0209600
Oryza glaberrima
ORGLA07G0209600
I
0.873
OGLUM07G26630
Oryza glumaepatula
OGLUM07G26630
I
0.873
Thhalv10018997m.g
Eutrema salsugineum
Thhalv10018997m.g
I
0.872
NAC029
Arabidopsis thaliana
AT1G69490
D
0.872
Cagra.0887s0008
Capsella grandiflora
Cagra.0887s0008
I
0.872
Bra004385
Brassica rapa
Bra004385
I
0.872
VIT_08s0040g02110
Vitis vinifera
VIT_08s0040g02110
I
0.872
NAP
Arabidopsis lyrata
fgenesh2_kg.2__1206__AT1G69490.1
I
0.872
Bo6g108930
Brassica oleracea
Bo6g108930
I
0.872
Carubv10020776m.g
Capsella rubella
Carubv10020776m.g
I
0.872
Bostr.10273s0418
Boechera stricta
Bostr.10273s0418
I
0.872
NAC68
Oryza sativa
OS01G0816100
I
0.871
LPERR01G30200
Leersia perrieri
LPERR01G30200
I
0.871
GSMUA_Achr7G21770_001
Musa acuminata
GSMUA_Achr7G21770_001
I
0.871
OB01G43840
Oryza brachyantha
OB01G43840
I
0.871
Si002386m.g
Setaria italica
Si002386m.g
N
0.871
ORUFI01G38320
Oryza rufipogon
ORUFI01G38320
I
0.871
ORGLA01G0288400
Oryza glaberrima
ORGLA01G0288400
I
0.871
ONIVA01G39980
Oryza nivara
ONIVA01G39980
I
0.871
OGLUM01G39020
Oryza glumaepatula
OGLUM01G39020
I
0.871
OMERI01G32290
Oryza meridionalis
OMERI01G32290
I
0.871
OBART01G35010
Oryza barthii
OBART01G35010
I
0.871
BGIOSGA000598
Oryza indica
BGIOSGA000598
I
0.871