Pavir.J22666 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.J22666 T298984_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC018
M07176_2.00 		Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH		 Dap-seq
OMalley et al.(2016)
NAM_colamp_a 		0.905 0.739
NAC018
M07177_2.00 		Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW		 Dap-seq
OMalley et al.(2016)
NAM_col_v3a 		0.905 0.739
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J22666.1.p NAC/NAM 66 192

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_2BS_924D34AA1 Triticum aestivum Traes_2BS_924D34AA1 I 0.971
Traes_2BS_C116E5668 Triticum aestivum Traes_2BS_C116E5668 I 0.971
Pavir.Bb03737 Panicum virgatum Pavir.Bb03737 I 0.970
Si030267m.g Setaria italica Si030267m.g I 0.970
GRMZM2G430849 Zea mays GRMZM2G430849 I 0.969
F775_02328 Aegilops tauschii F775_02328 I 0.967
BRADI1G17480 Brachypodium distachyon BRADI1G17480 I 0.966
ORGLA07G0209600 Oryza glaberrima ORGLA07G0209600 I 0.965
OGLUM07G26640 Oryza glumaepatula OGLUM07G26640 I 0.965
ORUFI07G27590 Oryza rufipogon ORUFI07G27590 I 0.965
OBART07G26600 Oryza barthii OBART07G26600 I 0.965
OGLUM07G26630 Oryza glumaepatula OGLUM07G26630 I 0.965
OMERI07G23240 Oryza meridionalis OMERI07G23240 I 0.965
BGIOSGA026407 Oryza indica BGIOSGA026407 I 0.965
OLONG_012944 Oryza longistaminata OLONG_012944 I 0.962
Sb02g043210 Sorghum bicolor Sb02g043210 I 0.962
ONIVA07G26310 Oryza nivara ONIVA07G26310 I 0.960
Traes_2DS_85FE89BC5 Triticum aestivum Traes_2DS_85FE89BC5 N 0.958
OPUNC07G25060 Oryza punctata OPUNC07G25060 I 0.957
OBART03G15960 Oryza barthii OBART03G15960 I 0.956
LPERR03G13950 Leersia perrieri LPERR03G13950 I 0.956
Sb01g036560 Sorghum bicolor Sb01g036560 I 0.956
ORUFI03G16510 Oryza rufipogon ORUFI03G16510 I 0.956
ONIVA03G16920 Oryza nivara ONIVA03G16920 I 0.956
ORGLA03G0152700 Oryza glaberrima ORGLA03G0152700 I 0.956
OMERI03G14270 Oryza meridionalis OMERI03G14270 I 0.956
OGLUM03G16100 Oryza glumaepatula OGLUM03G16100 I 0.956
OLONG_005610 Oryza longistaminata OLONG_005610 I 0.956
OS03G0327800 Oryza sativa OS03G0327800 I 0.954
OB07G32110 Oryza brachyantha OB07G32110 I 0.953
GRMZM2G042494 Zea mays GRMZM2G042494 I 0.953
GRMZM2G011598 Zea mays GRMZM2G011598 I 0.953
F775_02308 Aegilops tauschii F775_02308 I 0.951
Traes_4AS_DBDA5E9C6 Triticum aestivum Traes_4AS_DBDA5E9C6 I 0.951
Traes_4DL_F0BE36C9D Triticum aestivum Traes_4DL_F0BE36C9D I 0.951
TRIUR3_29857 Triticum urartu TRIUR3_29857 I 0.951
OB03G25680 Oryza brachyantha OB03G25680 I 0.951
MLOC_65101 Hordeum vulgare MLOC_65101 I 0.951
OPUNC03G15460 Oryza punctata OPUNC03G15460 I 0.949
BRADI1G63600 Brachypodium distachyon BRADI1G63600 I 0.948
GSMUA_Achr3G18010_001 Musa acuminata GSMUA_Achr3G18010_001 I 0.939
GRMZM2G109627 Zea mays GRMZM2G109627 I 0.934
TRIUR3_32458 Triticum urartu TRIUR3_32458 N 0.933
Pavir.J23256 Panicum virgatum Pavir.J23256 I 0.930
OB05G24480 Oryza brachyantha OB05G24480 I 0.929
F775_04075 Aegilops tauschii F775_04075 N 0.927
Pavir.Ea00837 Panicum virgatum Pavir.Ea00837 I 0.927
Lus10018469.g Linum usitatissimum Lus10018469.g I 0.921
GLYMA07G31220 Glycine max GLYMA07G31220 I 0.921
Lus10011215.g Linum usitatissimum Lus10011215.g I 0.921
Traes_2DS_F5B34D422 Triticum aestivum Traes_2DS_F5B34D422 N 0.921
MDP0000674514 Malus domestica MDP0000674514 I 0.920
Si036303m.g Setaria italica Si036303m.g I 0.919
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.919
GSMUA_AchrUn_randomG17360_001 Musa acuminata GSMUA_AchrUn_randomG17360_001 I 0.918
Thhalv10012308m.g Eutrema salsugineum Thhalv10012308m.g I 0.918
anac025 Vitis vinifera VIT_00s0375g00040 I 0.917
Traes_2AS_125195CDF Triticum aestivum Traes_2AS_125195CDF N 0.916
AMTR_s00119p00040230 Amborella trichopoda AMTR_s00119p00040230 I 0.916
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.916
LPERR07G23420 Leersia perrieri LPERR07G23420 N 0.914
GSMUA_Achr4G02380_001 Musa acuminata GSMUA_Achr4G02380_001 I 0.913
e_gw1.259.28.1 Physcomitrella patens e_gw1.259.28.1 I 0.912
Bra021114 Brassica rapa Bra021114 I 0.912
Bo1g128420 Brassica oleracea Bo1g128420 I 0.912
Bo6g030920 Brassica oleracea Bo6g030920 I 0.910
Bra018997 Brassica rapa Bra018997 I 0.910
GSMUA_Achr6G17720_001 Musa acuminata GSMUA_Achr6G17720_001 I 0.910
SELMODRAFT_133982 Selaginella moellendorffii SELMODRAFT_133982 I 0.908
SELMODRAFT_47266 Selaginella moellendorffii SELMODRAFT_47266 I 0.908
Eucgr.B02485 Eucalyptus grandis Eucgr.B02485 I 0.908
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.908
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.906
Carubv10009524m.g Capsella rubella Carubv10009524m.g I 0.906
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.905
NAC018 Arabidopsis thaliana AT1G52880 D 0.905
NAM Arabidopsis lyrata fgenesh2_kg.1__4366__AT1G52880.1 I 0.901
MTR_2157s0010 Medicago truncatula MTR_2157s0010 I 0.900
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I 0.900
Lus10015076.g Linum usitatissimum Lus10015076.g N 0.899
Lus10023179.g Linum usitatissimum Lus10023179.g N 0.897
mgf016382m Mimulus guttatus mgf016382m I 0.896
mgf007362m Mimulus guttatus mgf007362m I 0.896
BRADI1G24390 Brachypodium distachyon BRADI1G24390 I 0.895
cassava42314.valid.m1 Manihot esculenta cassava42314.valid.m1 I 0.895
LPERR01G00250 Leersia perrieri LPERR01G00250 I 0.895
BRADI1G53770 Brachypodium distachyon BRADI1G53770 I 0.894
anac047 Vitis vinifera VIT_08s0007g07670 I 0.892
Traes_2AS_09457EDD8 Triticum aestivum Traes_2AS_09457EDD8 I 0.889
MLOC_8116 Hordeum vulgare MLOC_8116 I 0.889
Si002386m.g Setaria italica Si002386m.g N 0.889
Traes_2DS_5DF921ABB Triticum aestivum Traes_2DS_5DF921ABB I 0.889
Traes_6AS_6F89CC969 Triticum aestivum Traes_6AS_6F89CC969 I 0.889
F775_16000 Aegilops tauschii F775_16000 I 0.889
30078.m002348 Ricinus communis 30078.m002348 I 0.889
gene31150-v1.0-hybrid Fragaria vesca gene31150-v1.0-hybrid I 0.889
OPUNC07G07310 Oryza punctata OPUNC07G07310 I 0.889
Traes_6DS_90A627C3F Triticum aestivum Traes_6DS_90A627C3F I 0.889
F775_14365 Aegilops tauschii F775_14365 I 0.889
TCM_029931 Theobroma cacao TCM_029931 I 0.888
29851.m002359 Ricinus communis 29851.m002359 I 0.888
Gorai.009G170700 Gossypium raimondii Gorai.009G170700 I 0.888
Pm009955 Prunus mume Pm009955 I 0.888
PRUPE_ppa007314mg Prunus persica PRUPE_ppa007314mg I 0.888
evm.TU.supercontig_27.81 Carica papaya evm.TU.supercontig_27.81 I 0.888
Gorai.013G191800 Gossypium raimondii Gorai.013G191800 I 0.887
orange1.1g017854m.g Citrus sinensis orange1.1g017854m.g I 0.886
Ciclev10015688m.g Citrus clementina Ciclev10015688m.g I 0.886
GLYMA13G31660 Glycine max GLYMA13G31660 I 0.885
TRAES3BF108700110CFD_g Triticum aestivum TRAES3BF108700110CFD_g I 0.884
orange1.1g016791m.g Citrus sinensis orange1.1g016791m.g I 0.884
AMTR_s00007p00063550 Amborella trichopoda AMTR_s00007p00063550 N 0.884
VIT_08s0040g02110 Vitis vinifera VIT_08s0040g02110 I 0.884
mgf025001m Mimulus guttatus mgf025001m I 0.884
Ciclev10008628m.g Citrus clementina Ciclev10008628m.g I 0.884
Traes_2BS_58AA829F4 Triticum aestivum Traes_2BS_58AA829F4 I 0.884
cassava5169.m1 Manihot esculenta cassava5169.m1 I 0.883
Gorai.002G073800 Gossypium raimondii Gorai.002G073800 I 0.883
OGLUM01G00330 Oryza glumaepatula OGLUM01G00330 N 0.883
Ca_06901 Cicer arietinum Ca_06901 I 0.883
27961.m000091 Ricinus communis 27961.m000091 I 0.883
Gorai.013G167100 Gossypium raimondii Gorai.013G167100 I 0.883
ONIVA01G00250 Oryza nivara ONIVA01G00250 N 0.883
Gorai.009G433100 Gossypium raimondii Gorai.009G433100 I 0.883
GLYMA13G35560 Glycine max GLYMA13G35560 I 0.883
OB07G15670 Oryza brachyantha OB07G15670 I 0.883
MTR_2g080010 Medicago truncatula MTR_2g080010 I 0.883
TCM_031363 Theobroma cacao TCM_031363 I 0.883
Lus10043095.g Linum usitatissimum Lus10043095.g I 0.883
BGIOSGA002593 Oryza indica BGIOSGA002593 N 0.883
BGIOSGA002595 Oryza indica BGIOSGA002595 N 0.883
OS01G0104200 Oryza sativa OS01G0104200 N 0.883
Lus10032657.g Linum usitatissimum Lus10032657.g I 0.883
MDP0000868419 Malus domestica MDP0000868419 I 0.883
evm.TU.supercontig_80.94 Carica papaya evm.TU.supercontig_80.94 I 0.883
SELMODRAFT_105213 Selaginella moellendorffii SELMODRAFT_105213 I 0.882
SELMODRAFT_108667 Selaginella moellendorffii SELMODRAFT_108667 I 0.882
SELMODRAFT_125697 Selaginella moellendorffii SELMODRAFT_125697 I 0.882
PGSC0003DMG400025031 Solanum tuberosum PGSC0003DMG400025031 I 0.882
OPUNC01G00300 Oryza punctata OPUNC01G00300 I 0.882
OMERI12G00480 Oryza meridionalis OMERI12G00480 I 0.882
SELMODRAFT_147012 Selaginella moellendorffii SELMODRAFT_147012 I 0.882
OMERI07G06210 Oryza meridionalis OMERI07G06210 I 0.882
Pavir.Ba00642 Panicum virgatum Pavir.Ba00642 I 0.881
Cucsa.126450 Cucumis sativus Cucsa.126450 I 0.881
cassava22631.valid.m1 Manihot esculenta cassava22631.valid.m1 I 0.881
Ca_12031 Cicer arietinum Ca_12031 I 0.881
Pavir.J08552 Panicum virgatum Pavir.J08552 I 0.881
POPTR_0004s03820 Populus trichocarpa POPTR_0004s03820 I 0.880
Si030477m.g Setaria italica Si030477m.g N 0.880
gene30439-v1.0-hybrid Fragaria vesca gene30439-v1.0-hybrid I 0.880
AMTR_s00003p00252470 Amborella trichopoda AMTR_s00003p00252470 I 0.880
Aquca_027_00052 Aquilegia coerulea Aquca_027_00052 I 0.880
ORGLA07G0064400 Oryza glaberrima ORGLA07G0064400 I 0.879
ONIVA07G06360 Oryza nivara ONIVA07G06360 I 0.879
OGLUM07G07280 Oryza glumaepatula OGLUM07G07280 I 0.879
ORUFI07G07590 Oryza rufipogon ORUFI07G07590 I 0.879
BGIOSGA025410 Oryza indica BGIOSGA025410 I 0.879
SapurV1A.0044s0420 Salix purpurea SapurV1A.0044s0420 I 0.879
OBART07G07600 Oryza barthii OBART07G07600 I 0.879
PGSC0003DMG400017567 Solanum tuberosum PGSC0003DMG400017567 I 0.879
NAC67 Oryza sativa OS07G0225300 I 0.879
OB12G11500 Oryza brachyantha OB12G11500 I 0.878
GSMUA_Achr5G07590_001 Musa acuminata GSMUA_Achr5G07590_001 I 0.878
Sb03g037940 Sorghum bicolor Sb03g037940 I 0.878
GRMZM2G068973 Zea mays GRMZM2G068973 I 0.878
MTR_4g089135 Medicago truncatula MTR_4g089135 I 0.877
Ca_19654 Cicer arietinum Ca_19654 I 0.877
Cla011948 Citrullus lanatus Cla011948 I 0.877
Cucsa.074600 Cucumis sativus Cucsa.074600 I 0.877
Cla019771 Citrullus lanatus Cla019771 I 0.876
OB11G11210 Oryza brachyantha OB11G11210 I 0.876
GSMUA_Achr6G32330_001 Musa acuminata GSMUA_Achr6G32330_001 I 0.876
Gorai.007G267900 Gossypium raimondii Gorai.007G267900 I 0.876
Pavir.Ea03233 Panicum virgatum Pavir.Ea03233 I 0.875
Pavir.Eb03542 Panicum virgatum Pavir.Eb03542 I 0.875
MDP0000173636 Malus domestica MDP0000173636 I 0.875
LjSGA_036741.1 Lotus japonicus LjSGA_036741.1 I 0.875
BRADI2G53260 Brachypodium distachyon BRADI2G53260 I 0.874
LjSGA_023894.2 Lotus japonicus LjSGA_023894.2 I 0.874
MDP0000120881 Malus domestica MDP0000120881 I 0.874
PK19059.1 Cannabis sativa PK19059.1 I 0.874
Lus10006547.g Linum usitatissimum Lus10006547.g I 0.873
Eucgr.F01091 Eucalyptus grandis Eucgr.F01091 I 0.873
GLYMA15G07620 Glycine max GLYMA15G07620 I 0.873
VIT_19s0014g03300 Vitis vinifera VIT_19s0014g03300 I 0.872
NAC056 Arabidopsis thaliana AT3G15510 I 0.872
Thhalv10022353m.g Eutrema salsugineum Thhalv10022353m.g I 0.872
GLYMA12G22790 Glycine max GLYMA12G22790 I 0.872
ATNAC2 Arabidopsis lyrata fgenesh2_kg.3__1698__AT3G15510.1 I 0.872
ORUFI01G00290 Oryza rufipogon ORUFI01G00290 N 0.872
Bostr.28625s0148 Boechera stricta Bostr.28625s0148 I 0.872
Sb02g036620 Sorghum bicolor Sb02g036620 I 0.872
Bra027237 Brassica rapa Bra027237 I 0.872
Carubv10014008m.g Capsella rubella Carubv10014008m.g I 0.872
GRMZM2G179885 Zea mays GRMZM2G179885 I 0.872
SapurV1A.1196s0040 Salix purpurea SapurV1A.1196s0040 I 0.871
SapurV1A.0299s0130 Salix purpurea SapurV1A.0299s0130 I 0.871
SapurV1A.0867s0160 Salix purpurea SapurV1A.0867s0160 I 0.871