Lus10006547.g (Linum usitatissimum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Lus10006547.g T298217_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC047
M07198_2.00 		Arabidopsis thaliana
CACGB
VCGTG		 Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a 		0.902 0.873
NAC047
M07199_2.00 		Arabidopsis thaliana
WNNNWYACGYMWYYN
NRRWKRCGTRWNNNW		 Dap-seq
OMalley et al.(2016)
ANAC047_col 		0.902 0.873
NAC018
M07176_2.00 		Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH		 Dap-seq
OMalley et al.(2016)
NAM_colamp_a 		0.901 0.764
NAC018
M07177_2.00 		Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW		 Dap-seq
OMalley et al.(2016)
NAM_col_v3a 		0.901 0.764
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10006547 NAC/NAM 15 142

Links

Other NAC/NAM family TFs
Other Linum usitatissimum TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10003269.g Linum usitatissimum Lus10003269.g I 0.950
POPTR_0013s05080 Populus trichocarpa POPTR_0013s05080 I 0.943
Lus10042531.g Linum usitatissimum Lus10042531.g I 0.941
SapurV1A.1196s0040 Salix purpurea SapurV1A.1196s0040 I 0.934
SapurV1A.0867s0160 Salix purpurea SapurV1A.0867s0160 I 0.934
cassava22631.valid.m1 Manihot esculenta cassava22631.valid.m1 I 0.931
Lus10011215.g Linum usitatissimum Lus10011215.g I 0.930
Lus10018469.g Linum usitatissimum Lus10018469.g I 0.930
Ciclev10020717m.g Citrus clementina Ciclev10020717m.g I 0.927
29950.m001173 Ricinus communis 29950.m001173 I 0.927
orange1.1g017665m.g Citrus sinensis orange1.1g017665m.g I 0.927
cassava35701.valid.m1 Manihot esculenta cassava35701.valid.m1 I 0.922
Gorai.013G191800 Gossypium raimondii Gorai.013G191800 I 0.920
TCM_026030 Theobroma cacao TCM_026030 I 0.919
MDP0000674514 Malus domestica MDP0000674514 I 0.918
POPTR_0019s04690 Populus trichocarpa POPTR_0019s04690 I 0.917
SapurV1A.2115s0010 Salix purpurea SapurV1A.2115s0010 I 0.915
SapurV1A.1058s0080 Salix purpurea SapurV1A.1058s0080 I 0.915
anac025 Vitis vinifera VIT_00s0375g00040 I 0.914
anac047 Vitis vinifera VIT_08s0007g07670 I 0.911
Bo1g152220 Brassica oleracea Bo1g152220 I 0.909
Gorai.007G267900 Gossypium raimondii Gorai.007G267900 I 0.909
Bra040152 Brassica rapa Bra040152 I 0.909
GLYMA19G28476 Glycine max GLYMA19G28476 I 0.907
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.906
Carubv10009524m.g Capsella rubella Carubv10009524m.g I 0.906
GLYMA07G31220 Glycine max GLYMA07G31220 I 0.904
Carubv10014000m.g Capsella rubella Carubv10014000m.g I 0.902
anac047 Arabidopsis lyrata fgenesh2_kg.3__367__AT3G04070.1 I 0.902
NAC047 Arabidopsis thaliana AT3G04070 D 0.902
Bostr.2570s0301 Boechera stricta Bostr.2570s0301 I 0.902
Cagra.2026s0001 Capsella grandiflora Cagra.2026s0001 I 0.902
GLYMA16G04740 Glycine max GLYMA16G04740 I 0.902
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.901
Bo5g148420 Brassica oleracea Bo5g148420 I 0.901
NAC018 Arabidopsis thaliana AT1G52880 D 0.901
Bra031949 Brassica rapa Bra031949 I 0.900
GLYMA12G22790 Glycine max GLYMA12G22790 I 0.898
Thhalv10021011m.g Eutrema salsugineum Thhalv10021011m.g I 0.898
Bra021114 Brassica rapa Bra021114 I 0.897
Bo1g128420 Brassica oleracea Bo1g128420 I 0.897
Eucgr.K01471 Eucalyptus grandis Eucgr.K01471 N 0.897
NAM Arabidopsis lyrata fgenesh2_kg.1__4366__AT1G52880.1 I 0.897
30078.m002348 Ricinus communis 30078.m002348 I 0.890
POPTR_0011s04650 Populus trichocarpa POPTR_0011s04650 I 0.889
PK08629.1 Cannabis sativa PK08629.1 I 0.889
GLYMA06G38440 Glycine max GLYMA06G38440 I 0.888
GLYMA16G26740 Glycine max GLYMA16G26740 I 0.888
OPUNC03G15460 Oryza punctata OPUNC03G15460 I 0.887
LPERR03G13950 Leersia perrieri LPERR03G13950 I 0.887
PRUPE_ppa007577mg Prunus persica PRUPE_ppa007577mg I 0.885
Pm011604 Prunus mume Pm011604 I 0.885
Solyc07g063420.2 Solanum lycopersicum Solyc07g063420.2 I 0.885
PGSC0003DMG400019293 Solanum tuberosum PGSC0003DMG400019293 I 0.885
LjSGA_023894.2 Lotus japonicus LjSGA_023894.2 I 0.884
Sb01g036560 Sorghum bicolor Sb01g036560 I 0.882
GLYMA02G07700 Glycine max GLYMA02G07700 I 0.882
OLONG_005610 Oryza longistaminata OLONG_005610 I 0.881
ORUFI03G16510 Oryza rufipogon ORUFI03G16510 I 0.881
OBART03G15960 Oryza barthii OBART03G15960 I 0.881
OMERI03G14270 Oryza meridionalis OMERI03G14270 I 0.881
OGLUM03G16100 Oryza glumaepatula OGLUM03G16100 I 0.881
ONIVA03G16920 Oryza nivara ONIVA03G16920 I 0.881
ORGLA03G0152700 Oryza glaberrima ORGLA03G0152700 I 0.881
orange1.1g016791m.g Citrus sinensis orange1.1g016791m.g I 0.880
F775_16000 Aegilops tauschii F775_16000 I 0.880
F775_14365 Aegilops tauschii F775_14365 I 0.880
MLOC_8116 Hordeum vulgare MLOC_8116 I 0.880
Traes_6AS_6F89CC969 Triticum aestivum Traes_6AS_6F89CC969 I 0.880
Traes_2DS_5DF921ABB Triticum aestivum Traes_2DS_5DF921ABB I 0.880
Ciclev10008628m.g Citrus clementina Ciclev10008628m.g I 0.880
Traes_2AS_09457EDD8 Triticum aestivum Traes_2AS_09457EDD8 I 0.880
Traes_6DS_90A627C3F Triticum aestivum Traes_6DS_90A627C3F I 0.880
Lus10032657.g Linum usitatissimum Lus10032657.g I 0.879
MDP0000173636 Malus domestica MDP0000173636 I 0.879
Lus10043095.g Linum usitatissimum Lus10043095.g I 0.879
POPTR_0004s03820 Populus trichocarpa POPTR_0004s03820 I 0.879
gene30439-v1.0-hybrid Fragaria vesca gene30439-v1.0-hybrid I 0.879
MDP0000120881 Malus domestica MDP0000120881 I 0.878
gene31150-v1.0-hybrid Fragaria vesca gene31150-v1.0-hybrid I 0.877
Traes_4AS_DBDA5E9C6 Triticum aestivum Traes_4AS_DBDA5E9C6 I 0.877
Traes_4DL_F0BE36C9D Triticum aestivum Traes_4DL_F0BE36C9D I 0.877
GLYMA13G31660 Glycine max GLYMA13G31660 I 0.877
MLOC_65101 Hordeum vulgare MLOC_65101 I 0.877
TRIUR3_29857 Triticum urartu TRIUR3_29857 I 0.877
F775_02308 Aegilops tauschii F775_02308 I 0.877
OS03G0327800 Oryza sativa OS03G0327800 I 0.876
MDP0000868419 Malus domestica MDP0000868419 I 0.876
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.876
Gorai.013G167100 Gossypium raimondii Gorai.013G167100 I 0.876
SapurV1A.0299s0130 Salix purpurea SapurV1A.0299s0130 I 0.876
Aquca_059_00027 Aquilegia coerulea Aquca_059_00027 I 0.876
Gorai.009G433100 Gossypium raimondii Gorai.009G433100 I 0.875
POPTR_0001s41490 Populus trichocarpa POPTR_0001s41490 I 0.875
SapurV1A.2174s0010 Salix purpurea SapurV1A.2174s0010 I 0.875
27961.m000091 Ricinus communis 27961.m000091 I 0.875
cassava5169.m1 Manihot esculenta cassava5169.m1 I 0.875
Ca_06901 Cicer arietinum Ca_06901 I 0.875
MTR_2g080010 Medicago truncatula MTR_2g080010 I 0.875
Gorai.002G073800 Gossypium raimondii Gorai.002G073800 I 0.875
TCM_031363 Theobroma cacao TCM_031363 I 0.875
SapurV1A.0746s0010 Salix purpurea SapurV1A.0746s0010 I 0.875
evm.TU.supercontig_80.94 Carica papaya evm.TU.supercontig_80.94 I 0.875
SapurV1A.0127s0010 Salix purpurea SapurV1A.0127s0010 I 0.875
GRMZM2G179885 Zea mays GRMZM2G179885 I 0.874
MDP0000180683 Malus domestica MDP0000180683 I 0.874
OBART07G26600 Oryza barthii OBART07G26600 I 0.874
SapurV1A.0044s0420 Salix purpurea SapurV1A.0044s0420 I 0.874
BGIOSGA026407 Oryza indica BGIOSGA026407 I 0.874
ONIVA07G26310 Oryza nivara ONIVA07G26310 I 0.874
OGLUM07G26630 Oryza glumaepatula OGLUM07G26630 I 0.874
Sb02g036620 Sorghum bicolor Sb02g036620 I 0.874
Traes_2BS_58AA829F4 Triticum aestivum Traes_2BS_58AA829F4 I 0.874
TRAES3BF108700110CFD_g Triticum aestivum TRAES3BF108700110CFD_g I 0.874
Pm025312 Prunus mume Pm025312 I 0.874
PRUPE_ppa007445mg Prunus persica PRUPE_ppa007445mg I 0.874
Eucgr.F01091 Eucalyptus grandis Eucgr.F01091 I 0.874
OMERI07G23240 Oryza meridionalis OMERI07G23240 I 0.874
ORGLA07G0209600 Oryza glaberrima ORGLA07G0209600 I 0.874
OGLUM07G26640 Oryza glumaepatula OGLUM07G26640 I 0.874
ORUFI07G27590 Oryza rufipogon ORUFI07G27590 I 0.874
chr1.CM0104.240.nc Lotus japonicus chr1.CM0104.240.nc I 0.873
Cucsa.074600 Cucumis sativus Cucsa.074600 I 0.873
OB07G32110 Oryza brachyantha OB07G32110 I 0.873
Cla011948 Citrullus lanatus Cla011948 I 0.873
GRMZM2G011598 Zea mays GRMZM2G011598 I 0.873
Pavir.J22666 Panicum virgatum Pavir.J22666 I 0.873
Eucgr.B02485 Eucalyptus grandis Eucgr.B02485 I 0.872
BRADI1G63600 Brachypodium distachyon BRADI1G63600 I 0.872
Thhalv10012308m.g Eutrema salsugineum Thhalv10012308m.g I 0.872
cassava42314.valid.m1 Manihot esculenta cassava42314.valid.m1 I 0.872
BRADI1G17480 Brachypodium distachyon BRADI1G17480 I 0.871