CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.B02485
(
Eucalyptus grandis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Eucgr.B02485
T297684_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.906
0.728
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.906
0.728
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.B02485.1
NAC/NAM
12
139
PPGFRFHPSDEELIIHYLQNKVTSLPLPAPVIADIDLYKYNPWELPTEKALFGEDEWYFFSPRDRKYPNGGRPNRAAASGYWKATGTDKPILASGESRSIGVKKALVFYTGRPTKSAKTDWIMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Eucalyptus grandis
TFs
225 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_041055
Theobroma cacao
TCM_041055
I
0.936
30078.m002348
Ricinus communis
30078.m002348
I
0.932
Lus10036117.g
Linum usitatissimum
Lus10036117.g
I
0.930
GLYMA12G29360
Glycine max
GLYMA12G29360
I
0.929
GSMUA_Achr6G17720_001
Musa acuminata
GSMUA_Achr6G17720_001
I
0.928
Lus10007410.g
Linum usitatissimum
Lus10007410.g
I
0.927
Bo6g030920
Brassica oleracea
Bo6g030920
I
0.927
Bra018997
Brassica rapa
Bra018997
I
0.927
VIT_08s0040g02110
Vitis vinifera
VIT_08s0040g02110
I
0.926
Thhalv10012308m.g
Eutrema salsugineum
Thhalv10012308m.g
I
0.924
cassava3577.m1
Manihot esculenta
cassava3577.m1
I
0.922
GSMUA_Achr4G10310_001
Musa acuminata
GSMUA_Achr4G10310_001
I
0.922
VIT_06s0004g03080
Vitis vinifera
VIT_06s0004g03080
I
0.922
GLYMA19G36421
Glycine max
GLYMA19G36421
I
0.921
evm.TU.contig_33298
Carica papaya
evm.TU.contig_33298
I
0.921
chr3.CM0111.130.nd
Lotus japonicus
chr3.CM0111.130.nd
I
0.920
GLYMA13G40251
Glycine max
GLYMA13G40251
I
0.920
Si030267m.g
Setaria italica
Si030267m.g
I
0.920
GRMZM2G430849
Zea mays
GRMZM2G430849
I
0.917
GLYMA03G33690
Glycine max
GLYMA03G33690
I
0.917
chr1.CM0033.600.nc
Lotus japonicus
chr1.CM0033.600.nc
I
0.916
MTR_2g093810
Medicago truncatula
MTR_2g093810
I
0.916
MTR_7g100990
Medicago truncatula
MTR_7g100990
I
0.915
GLYMA05G15533
Glycine max
GLYMA05G15533
I
0.915
GLYMA12G21272
Glycine max
GLYMA12G21272
I
0.915
Pavir.Bb03737
Panicum virgatum
Pavir.Bb03737
I
0.914
BRADI1G17480
Brachypodium distachyon
BRADI1G17480
I
0.912
Ca_12031
Cicer arietinum
Ca_12031
I
0.911
Eucgr.J00940
Eucalyptus grandis
Eucgr.J00940
N
0.910
Pavir.J22666
Panicum virgatum
Pavir.J22666
I
0.908
Traes_2BS_C116E5668
Triticum aestivum
Traes_2BS_C116E5668
I
0.907
anac025
Vitis vinifera
VIT_00s0375g00040
I
0.907
Traes_2BS_924D34AA1
Triticum aestivum
Traes_2BS_924D34AA1
I
0.907
F775_02328
Aegilops tauschii
F775_02328
I
0.907
PRUPE_ppa017586mg
Prunus persica
PRUPE_ppa017586mg
N
0.906
NAC018
Arabidopsis thaliana
AT1G52880
D
0.906
Bostr.0124s0081
Boechera stricta
Bostr.0124s0081
I
0.906
Cagra.0946s0024
Capsella grandiflora
Cagra.0946s0024
I
0.904
Lus10011215.g
Linum usitatissimum
Lus10011215.g
I
0.904
Lus10018469.g
Linum usitatissimum
Lus10018469.g
I
0.904
Carubv10009524m.g
Capsella rubella
Carubv10009524m.g
I
0.904
BGIOSGA026407
Oryza indica
BGIOSGA026407
I
0.903
ORUFI07G27590
Oryza rufipogon
ORUFI07G27590
I
0.903
OGLUM07G26640
Oryza glumaepatula
OGLUM07G26640
I
0.903
OGLUM07G26630
Oryza glumaepatula
OGLUM07G26630
I
0.903
OBART07G26600
Oryza barthii
OBART07G26600
I
0.903
ONIVA07G26310
Oryza nivara
ONIVA07G26310
I
0.903
OMERI07G23240
Oryza meridionalis
OMERI07G23240
I
0.903
MDP0000674514
Malus domestica
MDP0000674514
I
0.903
ORGLA07G0209600
Oryza glaberrima
ORGLA07G0209600
I
0.903
NAM
Arabidopsis lyrata
fgenesh2_kg.1__4366__AT1G52880.1
I
0.902
AMTR_s00007p00063550
Amborella trichopoda
AMTR_s00007p00063550
N
0.902
MDP0000255884
Malus domestica
MDP0000255884
N
0.902
gene04766-v1.0-hybrid
Fragaria vesca
gene04766-v1.0-hybrid
I
0.902
GLYMA12G22790
Glycine max
GLYMA12G22790
I
0.901
OPUNC01G34000
Oryza punctata
OPUNC01G34000
I
0.901
orange1.1g042614m.g
Citrus sinensis
orange1.1g042614m.g
N
0.901
GLYMA07G31220
Glycine max
GLYMA07G31220
I
0.901
Sb02g043210
Sorghum bicolor
Sb02g043210
I
0.901
Eucgr.I00057
Eucalyptus grandis
Eucgr.I00057
I
0.900
OLONG_012944
Oryza longistaminata
OLONG_012944
I
0.900
OB05G24480
Oryza brachyantha
OB05G24480
I
0.899
Bo1g128420
Brassica oleracea
Bo1g128420
I
0.899
Bra021114
Brassica rapa
Bra021114
I
0.899
Eucgr.I00095
Eucalyptus grandis
Eucgr.I00095
I
0.898
OPUNC07G25060
Oryza punctata
OPUNC07G25060
I
0.897
OB07G32110
Oryza brachyantha
OB07G32110
I
0.897
GLYMA06G38440
Glycine max
GLYMA06G38440
I
0.896
Eucgr.I00056
Eucalyptus grandis
Eucgr.I00056
I
0.896
Eucgr.I00058
Eucalyptus grandis
Eucgr.I00058
I
0.896
GSMUA_Achr6G32330_001
Musa acuminata
GSMUA_Achr6G32330_001
I
0.895
Bo2g092550
Brassica oleracea
Bo2g092550
I
0.895
cassava26728.m1
Manihot esculenta
cassava26728.m1
I
0.894
BRADI2G53260
Brachypodium distachyon
BRADI2G53260
I
0.893
Pavir.J30396
Panicum virgatum
Pavir.J30396
I
0.893
OB03G25680
Oryza brachyantha
OB03G25680
I
0.892
LjSGA_036741.1
Lotus japonicus
LjSGA_036741.1
I
0.891
GSMUA_Achr10G29200_001
Musa acuminata
GSMUA_Achr10G29200_001
I
0.891
LPERR03G13950
Leersia perrieri
LPERR03G13950
I
0.890
evm.TU.supercontig_435.1
Carica papaya
evm.TU.supercontig_435.1
N
0.890
Sb01g036560
Sorghum bicolor
Sb01g036560
I
0.889
Thhalv10018998m.g
Eutrema salsugineum
Thhalv10018998m.g
I
0.889
NAC032
Arabidopsis thaliana
AT1G77450
I
0.888
Carubv10020834m.g
Capsella rubella
Carubv10020834m.g
I
0.888
anac032
Arabidopsis lyrata
scaffold_202708.1
I
0.888
Cagra.0096s0087
Capsella grandiflora
Cagra.0096s0087
I
0.888
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
0.888
Sb03g037940
Sorghum bicolor
Sb03g037940
I
0.887
ORGLA11G0050000
Oryza glaberrima
ORGLA11G0050000
I
0.887
ORUFI11G05080
Oryza rufipogon
ORUFI11G05080
I
0.887
NAC71
Oryza sativa
OS11G0184900
I
0.887
ONIVA11G05560
Oryza nivara
ONIVA11G05560
I
0.887
BGIOSGA034376
Oryza indica
BGIOSGA034376
I
0.887
BGIOSGA034377
Oryza indica
BGIOSGA034377
I
0.887
OBART11G05220
Oryza barthii
OBART11G05220
I
0.887
GRMZM2G068973
Zea mays
GRMZM2G068973
I
0.887
OMERI11G04290
Oryza meridionalis
OMERI11G04290
I
0.887
OLONG_000792
Oryza longistaminata
OLONG_000792
I
0.887
OGLUM11G05010
Oryza glumaepatula
OGLUM11G05010
I
0.887
Cucsa.341790
Cucumis sativus
Cucsa.341790
I
0.886
Bostr.20129s0180
Boechera stricta
Bostr.20129s0180
I
0.886
30111.m000742
Ricinus communis
30111.m000742
N
0.886
POPTR_0011s04650
Populus trichocarpa
POPTR_0011s04650
I
0.886
Cla023771
Citrullus lanatus
Cla023771
I
0.886
Lus10023179.g
Linum usitatissimum
Lus10023179.g
N
0.886
Si026342m.g
Setaria italica
Si026342m.g
I
0.885
Ca_02520
Cicer arietinum
Ca_02520
I
0.885
PGSC0003DMG400009245
Solanum tuberosum
PGSC0003DMG400009245
I
0.885
GRMZM2G011598
Zea mays
GRMZM2G011598
I
0.885
GSMUA_AchrUn_randomG17360_001
Musa acuminata
GSMUA_AchrUn_randomG17360_001
I
0.885
OPUNC11G05010
Oryza punctata
OPUNC11G05010
I
0.884
GLYMA10G09246
Glycine max
GLYMA10G09246
N
0.884
Lus10015076.g
Linum usitatissimum
Lus10015076.g
N
0.884
LPERR11G04670
Leersia perrieri
LPERR11G04670
I
0.884
29648.m002012
Ricinus communis
29648.m002012
I
0.884
ATAF2
Arabidopsis lyrata
scaffold_600916.1
I
0.884
Bostr.13129s0073
Boechera stricta
Bostr.13129s0073
I
0.884
Bra008309
Brassica rapa
Bra008309
I
0.884
Bra028645
Brassica rapa
Bra028645
I
0.884
Bo02109s010
Brassica oleracea
Bo02109s010
I
0.884
Thhalv10014325m.g
Eutrema salsugineum
Thhalv10014325m.g
I
0.884
NAC081
Arabidopsis thaliana
AT5G08790
I
0.884
Thhalv10008371m.g
Eutrema salsugineum
Thhalv10008371m.g
I
0.884
Bo2g009250
Brassica oleracea
Bo2g009250
I
0.884
Bo9g174170
Brassica oleracea
Bo9g174170
I
0.884
TRAES3BF094400050CFD_g
Triticum aestivum
TRAES3BF094400050CFD_g
N
0.883
GLYMA02G26480
Glycine max
GLYMA02G26480
I
0.883
Pavir.Ea03233
Panicum virgatum
Pavir.Ea03233
I
0.883
Pavir.J34979
Panicum virgatum
Pavir.J34979
I
0.883
Pavir.Eb03542
Panicum virgatum
Pavir.Eb03542
I
0.883
SELMODRAFT_147012
Selaginella moellendorffii
SELMODRAFT_147012
I
0.883
MLOC_70929
Hordeum vulgare
MLOC_70929
N
0.883
SELMODRAFT_108667
Selaginella moellendorffii
SELMODRAFT_108667
I
0.883
Pavir.Ea00837
Panicum virgatum
Pavir.Ea00837
I
0.882
gene11226-v1.0-hybrid
Fragaria vesca
gene11226-v1.0-hybrid
I
0.882
Solyc06g060230.2
Solanum lycopersicum
Solyc06g060230.2
I
0.882
SELMODRAFT_105213
Selaginella moellendorffii
SELMODRAFT_105213
I
0.881
SELMODRAFT_125697
Selaginella moellendorffii
SELMODRAFT_125697
I
0.881
Pm004758
Prunus mume
Pm004758
I
0.881
PRUPE_ppa009380mg
Prunus persica
PRUPE_ppa009380mg
I
0.881
Pm011604
Prunus mume
Pm011604
I
0.880
PRUPE_ppa007577mg
Prunus persica
PRUPE_ppa007577mg
I
0.880
VIT_07s0031g02610
Vitis vinifera
VIT_07s0031g02610
I
0.880
Gorai.009G418700
Gossypium raimondii
Gorai.009G418700
I
0.880
PK08629.1
Cannabis sativa
PK08629.1
I
0.880
POPTR_0005s20240
Populus trichocarpa
POPTR_0005s20240
I
0.880
Cla019771
Citrullus lanatus
Cla019771
I
0.879
OPUNC03G15460
Oryza punctata
OPUNC03G15460
I
0.879
mgf004020m
Mimulus guttatus
mgf004020m
I
0.879
Ciclev10001976m.g
Citrus clementina
Ciclev10001976m.g
I
0.879
OB11G14310
Oryza brachyantha
OB11G14310
I
0.879
SapurV1A.0044s0420
Salix purpurea
SapurV1A.0044s0420
I
0.879
Si022381m.g
Setaria italica
Si022381m.g
I
0.879
NAC68
Oryza sativa
OS01G0816100
I
0.878
OB01G43840
Oryza brachyantha
OB01G43840
I
0.878
BGIOSGA000598
Oryza indica
BGIOSGA000598
I
0.878
POPTR_0002s08150
Populus trichocarpa
POPTR_0002s08150
I
0.878
ORUFI01G38320
Oryza rufipogon
ORUFI01G38320
I
0.878
ORGLA01G0288400
Oryza glaberrima
ORGLA01G0288400
I
0.878
Aquca_027_00052
Aquilegia coerulea
Aquca_027_00052
I
0.878
Aquca_014_00941
Aquilegia coerulea
Aquca_014_00941
I
0.878
LPERR01G30200
Leersia perrieri
LPERR01G30200
I
0.878
OGLUM01G39020
Oryza glumaepatula
OGLUM01G39020
I
0.878
OMERI01G32290
Oryza meridionalis
OMERI01G32290
I
0.878
ONIVA01G39980
Oryza nivara
ONIVA01G39980
I
0.878
OBART01G35010
Oryza barthii
OBART01G35010
I
0.878
anac047
Vitis vinifera
VIT_08s0007g07670
I
0.877
Gorai.011G030600
Gossypium raimondii
Gorai.011G030600
N
0.877
MLOC_63743
Hordeum vulgare
MLOC_63743
I
0.877
GRMZM2G109627
Zea mays
GRMZM2G109627
I
0.877
Eucgr.I00101
Eucalyptus grandis
Eucgr.I00101
I
0.877
Cagra.1365s0094
Capsella grandiflora
Cagra.1365s0094
I
0.876
Pavir.J23256
Panicum virgatum
Pavir.J23256
I
0.876
Bo1g152220
Brassica oleracea
Bo1g152220
I
0.876
Bo3g005100
Brassica oleracea
Bo3g005100
I
0.876
Sb09g020750
Sorghum bicolor
Sb09g020750
I
0.876
Carubv10003254m.g
Capsella rubella
Carubv10003254m.g
I
0.876
Pm001001
Prunus mume
Pm001001
N
0.876
Traes_2DS_85FE89BC5
Triticum aestivum
Traes_2DS_85FE89BC5
N
0.876
Bra006015
Brassica rapa
Bra006015
I
0.876
Bra040152
Brassica rapa
Bra040152
I
0.876
Bra009370
Brassica rapa
Bra009370
I
0.875
POPTR_0011s05760
Populus trichocarpa
POPTR_0011s05760
N
0.875
OLONG_005610
Oryza longistaminata
OLONG_005610
I
0.875
GRMZM2G123667
Zea mays
GRMZM2G123667
I
0.875
OMERI03G14270
Oryza meridionalis
OMERI03G14270
I
0.875
GRMZM2G042494
Zea mays
GRMZM2G042494
I
0.875
ORGLA03G0152700
Oryza glaberrima
ORGLA03G0152700
I
0.875
OGLUM03G16100
Oryza glumaepatula
OGLUM03G16100
I
0.875
ONIVA03G16920
Oryza nivara
ONIVA03G16920
I
0.875
OBART03G15960
Oryza barthii
OBART03G15960
I
0.875
GRMZM2G180328
Zea mays
GRMZM2G180328
I
0.875
ORUFI03G16510
Oryza rufipogon
ORUFI03G16510
I
0.875
GSMUA_Achr10G04570_001
Musa acuminata
GSMUA_Achr10G04570_001
I
0.875
F775_02308
Aegilops tauschii
F775_02308
I
0.874
MLOC_65101
Hordeum vulgare
MLOC_65101
I
0.874
Traes_4AS_DBDA5E9C6
Triticum aestivum
Traes_4AS_DBDA5E9C6
I
0.874
Traes_4DL_F0BE36C9D
Triticum aestivum
Traes_4DL_F0BE36C9D
I
0.874
TRIUR3_29857
Triticum urartu
TRIUR3_29857
I
0.874
OB07G15670
Oryza brachyantha
OB07G15670
I
0.873
Si002386m.g
Setaria italica
Si002386m.g
N
0.873
cassava42314.valid.m1
Manihot esculenta
cassava42314.valid.m1
I
0.873
Cucsa.125330
Cucumis sativus
Cucsa.125330
I
0.873
mgf007362m
Mimulus guttatus
mgf007362m
I
0.873
mgf016382m
Mimulus guttatus
mgf016382m
I
0.873
NAC67
Oryza sativa
OS07G0225300
I
0.872
BGIOSGA025410
Oryza indica
BGIOSGA025410
I
0.872
AMTR_s00009p00259320
Amborella trichopoda
AMTR_s00009p00259320
I
0.872
OGLUM07G07280
Oryza glumaepatula
OGLUM07G07280
I
0.872
OBART07G07600
Oryza barthii
OBART07G07600
I
0.872
ONIVA07G06360
Oryza nivara
ONIVA07G06360
I
0.872
GSMUA_Achr6G25380_001
Musa acuminata
GSMUA_Achr6G25380_001
I
0.872
ORUFI07G07590
Oryza rufipogon
ORUFI07G07590
I
0.872
Cla023536
Citrullus lanatus
Cla023536
I
0.872
Lus10006547.g
Linum usitatissimum
Lus10006547.g
I
0.872
ORGLA07G0064400
Oryza glaberrima
ORGLA07G0064400
I
0.872
Ca_16946
Cicer arietinum
Ca_16946
I
0.871
GSMUA_Achr5G07590_001
Musa acuminata
GSMUA_Achr5G07590_001
I
0.871
TCM_007543
Theobroma cacao
TCM_007543
I
0.871
PGSC0003DMG400025031
Solanum tuberosum
PGSC0003DMG400025031
I
0.871
Lus10025690.g
Linum usitatissimum
Lus10025690.g
I
0.871
Sb02g002620
Sorghum bicolor
Sb02g002620
N
0.871
GRMZM2G479980
Zea mays
GRMZM2G479980
N
0.871
PGSC0003DMG400019293
Solanum tuberosum
PGSC0003DMG400019293
I
0.871
Solyc07g063420.2
Solanum lycopersicum
Solyc07g063420.2
I
0.871