Sb02g043210 (Sorghum bicolor)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Sb02g043210 T295517_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC018
M07176_2.00 		Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH		 Dap-seq
OMalley et al.(2016)
NAM_colamp_a 		0.889 0.723
NAC018
M07177_2.00 		Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW		 Dap-seq
OMalley et al.(2016)
NAM_col_v3a 		0.889 0.723
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb02g043210.1 NAC/NAM 20 146

Links

Other NAC/NAM family TFs
Other Sorghum bicolor TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G430849 Zea mays GRMZM2G430849 I 0.970
Si030267m.g Setaria italica Si030267m.g I 0.966
Pavir.J22666 Panicum virgatum Pavir.J22666 I 0.962
Traes_2BS_C116E5668 Triticum aestivum Traes_2BS_C116E5668 I 0.957
Traes_2BS_924D34AA1 Triticum aestivum Traes_2BS_924D34AA1 I 0.957
Pavir.Bb03737 Panicum virgatum Pavir.Bb03737 I 0.955
BRADI1G17480 Brachypodium distachyon BRADI1G17480 I 0.954
F775_02328 Aegilops tauschii F775_02328 I 0.950
OBART07G26600 Oryza barthii OBART07G26600 I 0.947
OGLUM07G26630 Oryza glumaepatula OGLUM07G26630 I 0.947
ORGLA07G0209600 Oryza glaberrima ORGLA07G0209600 I 0.947
BGIOSGA026407 Oryza indica BGIOSGA026407 I 0.947
OGLUM07G26640 Oryza glumaepatula OGLUM07G26640 I 0.947
ORUFI07G27590 Oryza rufipogon ORUFI07G27590 I 0.947
OMERI07G23240 Oryza meridionalis OMERI07G23240 I 0.947
OLONG_012944 Oryza longistaminata OLONG_012944 I 0.945
OBART03G15960 Oryza barthii OBART03G15960 I 0.943
ORUFI03G16510 Oryza rufipogon ORUFI03G16510 I 0.943
OPUNC07G25060 Oryza punctata OPUNC07G25060 I 0.943
ONIVA03G16920 Oryza nivara ONIVA03G16920 I 0.943
OLONG_005610 Oryza longistaminata OLONG_005610 I 0.943
ORGLA03G0152700 Oryza glaberrima ORGLA03G0152700 I 0.943
OMERI03G14270 Oryza meridionalis OMERI03G14270 I 0.943
OGLUM03G16100 Oryza glumaepatula OGLUM03G16100 I 0.943
Sb01g036560 Sorghum bicolor Sb01g036560 I 0.941
OS03G0327800 Oryza sativa OS03G0327800 I 0.940
ONIVA07G26310 Oryza nivara ONIVA07G26310 I 0.940
LPERR03G13950 Leersia perrieri LPERR03G13950 I 0.940
Traes_2DS_85FE89BC5 Triticum aestivum Traes_2DS_85FE89BC5 N 0.939
GRMZM2G042494 Zea mays GRMZM2G042494 I 0.939
MLOC_65101 Hordeum vulgare MLOC_65101 I 0.937
GRMZM2G011598 Zea mays GRMZM2G011598 I 0.937
TRIUR3_29857 Triticum urartu TRIUR3_29857 I 0.937
F775_02308 Aegilops tauschii F775_02308 I 0.937
Traes_4DL_F0BE36C9D Triticum aestivum Traes_4DL_F0BE36C9D I 0.937
Traes_4AS_DBDA5E9C6 Triticum aestivum Traes_4AS_DBDA5E9C6 I 0.937
BRADI1G63600 Brachypodium distachyon BRADI1G63600 I 0.934
OPUNC03G15460 Oryza punctata OPUNC03G15460 I 0.934
OB03G25680 Oryza brachyantha OB03G25680 I 0.933
OB07G32110 Oryza brachyantha OB07G32110 I 0.932
GSMUA_Achr3G18010_001 Musa acuminata GSMUA_Achr3G18010_001 I 0.924
OB05G24480 Oryza brachyantha OB05G24480 I 0.921
GSMUA_AchrUn_randomG17360_001 Musa acuminata GSMUA_AchrUn_randomG17360_001 I 0.916
Pavir.J23256 Panicum virgatum Pavir.J23256 I 0.915
Pavir.Ea00837 Panicum virgatum Pavir.Ea00837 I 0.911
Thhalv10012308m.g Eutrema salsugineum Thhalv10012308m.g I 0.911
GRMZM2G109627 Zea mays GRMZM2G109627 I 0.910
TRIUR3_32458 Triticum urartu TRIUR3_32458 N 0.905
GSMUA_Achr6G17720_001 Musa acuminata GSMUA_Achr6G17720_001 I 0.904
Bo6g030920 Brassica oleracea Bo6g030920 I 0.903
Bra018997 Brassica rapa Bra018997 I 0.903
LPERR03G32860 Leersia perrieri LPERR03G32860 I 0.902
Eucgr.B02485 Eucalyptus grandis Eucgr.B02485 I 0.901
MDP0000674514 Malus domestica MDP0000674514 I 0.901
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.901
Pavir.J04666 Panicum virgatum Pavir.J04666 I 0.899
Si036695m.g Setaria italica Si036695m.g I 0.899
SELMODRAFT_47266 Selaginella moellendorffii SELMODRAFT_47266 I 0.899
Lus10018469.g Linum usitatissimum Lus10018469.g I 0.899
SELMODRAFT_133982 Selaginella moellendorffii SELMODRAFT_133982 I 0.899
Lus10011215.g Linum usitatissimum Lus10011215.g I 0.899
AMTR_s00119p00040230 Amborella trichopoda AMTR_s00119p00040230 I 0.898
GRMZM2G018553 Zea mays GRMZM2G018553 I 0.898
GRMZM2G336533 Zea mays GRMZM2G336533 I 0.898
ORGLA03G0354300 Oryza glaberrima ORGLA03G0354300 I 0.897
OS03G0815100 Oryza sativa OS03G0815100 I 0.897
ORUFI03G40310 Oryza rufipogon ORUFI03G40310 I 0.897
OGLUM03G38490 Oryza glumaepatula OGLUM03G38490 I 0.897
OPUNC03G35740 Oryza punctata OPUNC03G35740 I 0.897
BGIOSGA013814 Oryza indica BGIOSGA013814 I 0.897
GSMUA_Achr4G02380_001 Musa acuminata GSMUA_Achr4G02380_001 I 0.897
GRMZM2G347043 Zea mays GRMZM2G347043 I 0.897
BRADI1G04150 Brachypodium distachyon BRADI1G04150 I 0.897
Bo1g128420 Brassica oleracea Bo1g128420 I 0.897
Bra021114 Brassica rapa Bra021114 I 0.897
OB03G45600 Oryza brachyantha OB03G45600 I 0.897
OMERI03G35600 Oryza meridionalis OMERI03G35600 I 0.897
ONIVA03G40320 Oryza nivara ONIVA03G40320 I 0.897
OLONG_018385 Oryza longistaminata OLONG_018385 I 0.897
OBART03G38670 Oryza barthii OBART03G38670 I 0.897
MLOC_37104 Hordeum vulgare MLOC_37104 I 0.895
Traes_5BL_4497A137C Triticum aestivum Traes_5BL_4497A137C I 0.895
Sb01g003710 Sorghum bicolor Sb01g003710 I 0.894
GLYMA07G31220 Glycine max GLYMA07G31220 I 0.894
F775_04075 Aegilops tauschii F775_04075 N 0.893
Si036303m.g Setaria italica Si036303m.g I 0.892
Pavir.Ia00158 Panicum virgatum Pavir.Ia00158 I 0.892
Lus10015076.g Linum usitatissimum Lus10015076.g N 0.892
Carubv10009524m.g Capsella rubella Carubv10009524m.g I 0.890
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.890
Lus10023179.g Linum usitatissimum Lus10023179.g N 0.890
anac025 Vitis vinifera VIT_00s0375g00040 I 0.889
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.889
NAC018 Arabidopsis thaliana AT1G52880 D 0.889
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I 0.889
Traes_2DS_F5B34D422 Triticum aestivum Traes_2DS_F5B34D422 N 0.888
MTR_2157s0010 Medicago truncatula MTR_2157s0010 I 0.888
e_gw1.259.28.1 Physcomitrella patens e_gw1.259.28.1 I 0.887
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.887
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.887
OPUNC07G07310 Oryza punctata OPUNC07G07310 I 0.887
Cla023536 Citrullus lanatus Cla023536 I 0.886
LPERR07G23420 Leersia perrieri LPERR07G23420 N 0.884
NAM Arabidopsis lyrata fgenesh2_kg.1__4366__AT1G52880.1 I 0.884
TRAES3BF094400050CFD_g Triticum aestivum TRAES3BF094400050CFD_g N 0.883
MLOC_70929 Hordeum vulgare MLOC_70929 N 0.883
Si002386m.g Setaria italica Si002386m.g N 0.882
Cucsa.125330 Cucumis sativus Cucsa.125330 I 0.882
BRADI1G53770 Brachypodium distachyon BRADI1G53770 I 0.882
OB07G15670 Oryza brachyantha OB07G15670 I 0.881
Traes_2AS_125195CDF Triticum aestivum Traes_2AS_125195CDF N 0.880
Gorai.012G037600 Gossypium raimondii Gorai.012G037600 I 0.879
VIT_08s0040g02110 Vitis vinifera VIT_08s0040g02110 I 0.876
evm.TU.supercontig_37.28 Carica papaya evm.TU.supercontig_37.28 I 0.876
Lus10018142.g Linum usitatissimum Lus10018142.g I 0.875
OB12G11500 Oryza brachyantha OB12G11500 I 0.875
OB11G11210 Oryza brachyantha OB11G11210 I 0.873
AMTR_s00007p00063550 Amborella trichopoda AMTR_s00007p00063550 N 0.873
Eucgr.I00101 Eucalyptus grandis Eucgr.I00101 I 0.873
cassava5772.m1 Manihot esculenta cassava5772.m1 I 0.873
Eucgr.I00060 Eucalyptus grandis Eucgr.I00060 I 0.873
TCM_001595 Theobroma cacao TCM_001595 I 0.872
mgf016382m Mimulus guttatus mgf016382m I 0.872
mgf007362m Mimulus guttatus mgf007362m I 0.872
OMERI07G06210 Oryza meridionalis OMERI07G06210 I 0.872
SELMODRAFT_147012 Selaginella moellendorffii SELMODRAFT_147012 I 0.872
SELMODRAFT_108667 Selaginella moellendorffii SELMODRAFT_108667 I 0.872
Lus10025690.g Linum usitatissimum Lus10025690.g I 0.872
cassava42314.valid.m1 Manihot esculenta cassava42314.valid.m1 I 0.871