CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB03G25680
(
Oryza brachyantha
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
OB03G25680
T293860_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.923
0.757
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.923
0.757
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY
RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.892
0.766
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB03G25680.1
NAC/NAM
10
140
PPGFRFHPTDEELIVHYLRNRAASSPCPVSIIADVDIYKFDPWVLPSKAAYGDKEWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIHSSGGGGGSNESVGVKKALVFYKGRPPKGTKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Oryza brachyantha
TFs
205 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR03G13950
Leersia perrieri
LPERR03G13950
I
0.968
GRMZM2G011598
Zea mays
GRMZM2G011598
I
0.957
OPUNC03G15460
Oryza punctata
OPUNC03G15460
I
0.956
Sb01g036560
Sorghum bicolor
Sb01g036560
I
0.955
GRMZM2G042494
Zea mays
GRMZM2G042494
I
0.955
F775_02308
Aegilops tauschii
F775_02308
I
0.955
Traes_4DL_F0BE36C9D
Triticum aestivum
Traes_4DL_F0BE36C9D
I
0.955
Traes_4AS_DBDA5E9C6
Triticum aestivum
Traes_4AS_DBDA5E9C6
I
0.955
MLOC_65101
Hordeum vulgare
MLOC_65101
I
0.955
TRIUR3_29857
Triticum urartu
TRIUR3_29857
I
0.955
OLONG_005610
Oryza longistaminata
OLONG_005610
I
0.953
OBART03G15960
Oryza barthii
OBART03G15960
I
0.953
OMERI03G14270
Oryza meridionalis
OMERI03G14270
I
0.953
ORUFI03G16510
Oryza rufipogon
ORUFI03G16510
I
0.953
ONIVA03G16920
Oryza nivara
ONIVA03G16920
I
0.953
ORGLA03G0152700
Oryza glaberrima
ORGLA03G0152700
I
0.953
OGLUM03G16100
Oryza glumaepatula
OGLUM03G16100
I
0.953
Pavir.J22666
Panicum virgatum
Pavir.J22666
I
0.951
OS03G0327800
Oryza sativa
OS03G0327800
I
0.951
BRADI1G63600
Brachypodium distachyon
BRADI1G63600
I
0.948
OPUNC07G25060
Oryza punctata
OPUNC07G25060
I
0.948
Si030267m.g
Setaria italica
Si030267m.g
I
0.946
Traes_2BS_924D34AA1
Triticum aestivum
Traes_2BS_924D34AA1
I
0.946
Traes_2BS_C116E5668
Triticum aestivum
Traes_2BS_C116E5668
I
0.946
F775_02328
Aegilops tauschii
F775_02328
I
0.946
GRMZM2G430849
Zea mays
GRMZM2G430849
I
0.944
Pavir.Bb03737
Panicum virgatum
Pavir.Bb03737
I
0.944
ORGLA07G0209600
Oryza glaberrima
ORGLA07G0209600
I
0.938
OBART07G26600
Oryza barthii
OBART07G26600
I
0.938
ORUFI07G27590
Oryza rufipogon
ORUFI07G27590
I
0.938
OGLUM07G26630
Oryza glumaepatula
OGLUM07G26630
I
0.938
OMERI07G23240
Oryza meridionalis
OMERI07G23240
I
0.938
OGLUM07G26640
Oryza glumaepatula
OGLUM07G26640
I
0.938
ONIVA07G26310
Oryza nivara
ONIVA07G26310
I
0.938
BGIOSGA026407
Oryza indica
BGIOSGA026407
I
0.938
BRADI1G17480
Brachypodium distachyon
BRADI1G17480
I
0.937
GSMUA_Achr3G18010_001
Musa acuminata
GSMUA_Achr3G18010_001
I
0.934
Sb02g043210
Sorghum bicolor
Sb02g043210
I
0.933
OLONG_012944
Oryza longistaminata
OLONG_012944
I
0.933
GSMUA_Achr4G02380_001
Musa acuminata
GSMUA_Achr4G02380_001
I
0.932
Bra021114
Brassica rapa
Bra021114
I
0.932
Bo1g128420
Brassica oleracea
Bo1g128420
I
0.932
OB07G32110
Oryza brachyantha
OB07G32110
I
0.929
MDP0000674514
Malus domestica
MDP0000674514
I
0.929
AMTR_s00119p00040230
Amborella trichopoda
AMTR_s00119p00040230
I
0.926
anac025
Vitis vinifera
VIT_00s0375g00040
I
0.925
GLYMA07G31220
Glycine max
GLYMA07G31220
I
0.924
Cagra.0946s0024
Capsella grandiflora
Cagra.0946s0024
I
0.924
Carubv10009524m.g
Capsella rubella
Carubv10009524m.g
I
0.924
Pavir.Ib01528
Panicum virgatum
Pavir.Ib01528
I
0.923
Bostr.0124s0081
Boechera stricta
Bostr.0124s0081
I
0.923
Si036303m.g
Setaria italica
Si036303m.g
I
0.923
NAC018
Arabidopsis thaliana
AT1G52880
D
0.923
Thhalv10012308m.g
Eutrema salsugineum
Thhalv10012308m.g
I
0.923
Traes_2DS_85FE89BC5
Triticum aestivum
Traes_2DS_85FE89BC5
N
0.922
NAM
Arabidopsis lyrata
fgenesh2_kg.1__4366__AT1G52880.1
I
0.920
GSMUA_AchrUn_randomG17360_001
Musa acuminata
GSMUA_AchrUn_randomG17360_001
I
0.916
Bra018997
Brassica rapa
Bra018997
I
0.916
Bo6g030920
Brassica oleracea
Bo6g030920
I
0.916
Lus10018469.g
Linum usitatissimum
Lus10018469.g
I
0.916
Lus10011215.g
Linum usitatissimum
Lus10011215.g
I
0.916
GSMUA_Achr7G21770_001
Musa acuminata
GSMUA_Achr7G21770_001
I
0.915
30078.m002348
Ricinus communis
30078.m002348
I
0.913
Aquca_027_00052
Aquilegia coerulea
Aquca_027_00052
I
0.912
GSMUA_Achr6G32320_001
Musa acuminata
GSMUA_Achr6G32320_001
I
0.911
GLYMA13G35560
Glycine max
GLYMA13G35560
I
0.910
MTR_2157s0010
Medicago truncatula
MTR_2157s0010
I
0.904
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
0.903
Si032676m.g
Setaria italica
Si032676m.g
I
0.903
OB05G24480
Oryza brachyantha
OB05G24480
I
0.902
OMERI07G15720
Oryza meridionalis
OMERI07G15720
I
0.902
GLYMA12G22790
Glycine max
GLYMA12G22790
I
0.902
mgf025001m
Mimulus guttatus
mgf025001m
I
0.901
GRMZM2G109627
Zea mays
GRMZM2G109627
I
0.901
MTR_4g089135
Medicago truncatula
MTR_4g089135
I
0.901
OPUNC07G17890
Oryza punctata
OPUNC07G17890
I
0.901
OLONG_002265
Oryza longistaminata
OLONG_002265
I
0.901
OB07G24770
Oryza brachyantha
OB07G24770
I
0.899
Pavir.J08552
Panicum virgatum
Pavir.J08552
I
0.899
Pavir.Ba00642
Panicum virgatum
Pavir.Ba00642
I
0.899
LPERR07G16320
Leersia perrieri
LPERR07G16320
I
0.898
Cla011948
Citrullus lanatus
Cla011948
I
0.898
Eucgr.F01091
Eucalyptus grandis
Eucgr.F01091
I
0.898
Gorai.007G267900
Gossypium raimondii
Gorai.007G267900
I
0.898
Cucsa.074600
Cucumis sativus
Cucsa.074600
I
0.898
orange1.1g016791m.g
Citrus sinensis
orange1.1g016791m.g
I
0.897
Ciclev10008628m.g
Citrus clementina
Ciclev10008628m.g
I
0.897
Pm009955
Prunus mume
Pm009955
I
0.896
VIT_19s0014g03300
Vitis vinifera
VIT_19s0014g03300
I
0.896
TCM_029931
Theobroma cacao
TCM_029931
I
0.896
29851.m002359
Ricinus communis
29851.m002359
I
0.896
GLYMA13G31660
Glycine max
GLYMA13G31660
I
0.896
evm.TU.supercontig_27.81
Carica papaya
evm.TU.supercontig_27.81
I
0.896
NAC056
Arabidopsis thaliana
AT3G15510
I
0.896
Thhalv10022353m.g
Eutrema salsugineum
Thhalv10022353m.g
I
0.896
Bra027237
Brassica rapa
Bra027237
I
0.896
Gorai.009G170700
Gossypium raimondii
Gorai.009G170700
I
0.896
Carubv10014008m.g
Capsella rubella
Carubv10014008m.g
I
0.896
Bostr.28625s0148
Boechera stricta
Bostr.28625s0148
I
0.896
ATNAC2
Arabidopsis lyrata
fgenesh2_kg.3__1698__AT3G15510.1
I
0.896
PRUPE_ppa007314mg
Prunus persica
PRUPE_ppa007314mg
I
0.896
Lus10032657.g
Linum usitatissimum
Lus10032657.g
I
0.895
GSMUA_Achr6G17720_001
Musa acuminata
GSMUA_Achr6G17720_001
I
0.895
Lus10043095.g
Linum usitatissimum
Lus10043095.g
I
0.895
PK19059.1
Cannabis sativa
PK19059.1
I
0.894
Bo5g127030
Brassica oleracea
Bo5g127030
I
0.894
Ca_12031
Cicer arietinum
Ca_12031
I
0.894
Ciclev10015688m.g
Citrus clementina
Ciclev10015688m.g
I
0.894
GRMZM2G179885
Zea mays
GRMZM2G179885
I
0.894
Sb02g036620
Sorghum bicolor
Sb02g036620
I
0.894
orange1.1g017854m.g
Citrus sinensis
orange1.1g017854m.g
I
0.894
GLYMA12G34990
Glycine max
GLYMA12G34990
I
0.893
Bo01282s010
Brassica oleracea
Bo01282s010
I
0.893
Bra027101
Brassica rapa
Bra027101
I
0.893
GLYMA06G38440
Glycine max
GLYMA06G38440
I
0.893
anac025
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2000277
I
0.892
Bostr.10040s0089
Boechera stricta
Bostr.10040s0089
I
0.892
Eucgr.B02485
Eucalyptus grandis
Eucgr.B02485
I
0.892
NAC025
Arabidopsis thaliana
AT1G61110
D
0.892
Pavir.Ea00837
Panicum virgatum
Pavir.Ea00837
I
0.892
Gorai.013G167100
Gossypium raimondii
Gorai.013G167100
I
0.892
VIT_08s0040g02110
Vitis vinifera
VIT_08s0040g02110
I
0.892
Carubv10021371m.g
Capsella rubella
Carubv10021371m.g
I
0.892
Cagra.2213s0001
Capsella grandiflora
Cagra.2213s0001
I
0.892
Gorai.002G073800
Gossypium raimondii
Gorai.002G073800
I
0.891
evm.TU.supercontig_80.94
Carica papaya
evm.TU.supercontig_80.94
I
0.891
27961.m000091
Ricinus communis
27961.m000091
I
0.891
cassava5169.m1
Manihot esculenta
cassava5169.m1
I
0.891
LPERR07G23420
Leersia perrieri
LPERR07G23420
N
0.891
Gorai.009G433100
Gossypium raimondii
Gorai.009G433100
I
0.891
Ca_06901
Cicer arietinum
Ca_06901
I
0.891
MDP0000868419
Malus domestica
MDP0000868419
I
0.891
TCM_031363
Theobroma cacao
TCM_031363
I
0.891
MTR_2g080010
Medicago truncatula
MTR_2g080010
I
0.891
POPTR_0004s03820
Populus trichocarpa
POPTR_0004s03820
I
0.890
gene30439-v1.0-hybrid
Fragaria vesca
gene30439-v1.0-hybrid
I
0.890
cassava42314.valid.m1
Manihot esculenta
cassava42314.valid.m1
I
0.889
Thhalv10023591m.g
Eutrema salsugineum
Thhalv10023591m.g
I
0.889
Ca_19654
Cicer arietinum
Ca_19654
I
0.888
AMTR_s00003p00252470
Amborella trichopoda
AMTR_s00003p00252470
I
0.888
mgf016382m
Mimulus guttatus
mgf016382m
I
0.888
mgf007362m
Mimulus guttatus
mgf007362m
I
0.888
OBART07G19010
Oryza barthii
OBART07G19010
I
0.887
ORUFI07G19770
Oryza rufipogon
ORUFI07G19770
I
0.887
ONIVA07G17340
Oryza nivara
ONIVA07G17340
I
0.887
ONAC010
Oryza indica
BGIOSGA024071
I
0.887
ORGLA07G0243600
Oryza glaberrima
ORGLA07G0243600
I
0.887
OGLUM07G18780
Oryza glumaepatula
OGLUM07G18780
I
0.887
Lus10015076.g
Linum usitatissimum
Lus10015076.g
N
0.887
ONAC010
Oryza sativa
OS07G0566500
I
0.886
LjSGA_023894.2
Lotus japonicus
LjSGA_023894.2
I
0.885
GLYMA15G07620
Glycine max
GLYMA15G07620
I
0.885
TCM_026030
Theobroma cacao
TCM_026030
I
0.884
Solyc07g063420.2
Solanum lycopersicum
Solyc07g063420.2
I
0.884
PGSC0003DMG400019293
Solanum tuberosum
PGSC0003DMG400019293
I
0.884
MDP0000173636
Malus domestica
MDP0000173636
I
0.884
Traes_2DS_F5B34D422
Triticum aestivum
Traes_2DS_F5B34D422
N
0.884
MDP0000120881
Malus domestica
MDP0000120881
I
0.883
SapurV1A.0299s0130
Salix purpurea
SapurV1A.0299s0130
I
0.882
SapurV1A.0044s0420
Salix purpurea
SapurV1A.0044s0420
I
0.882
Aquca_059_00027
Aquilegia coerulea
Aquca_059_00027
I
0.882
POPTR_0019s04690
Populus trichocarpa
POPTR_0019s04690
I
0.881
Lus10023179.g
Linum usitatissimum
Lus10023179.g
N
0.881
MTR_7g100990
Medicago truncatula
MTR_7g100990
I
0.881
Cla023771
Citrullus lanatus
Cla023771
I
0.880
Pavir.J23256
Panicum virgatum
Pavir.J23256
I
0.880
Cucsa.341790
Cucumis sativus
Cucsa.341790
I
0.880
LPERR01G00250
Leersia perrieri
LPERR01G00250
I
0.879
TRIUR3_32458
Triticum urartu
TRIUR3_32458
N
0.879
OPUNC01G00300
Oryza punctata
OPUNC01G00300
I
0.879
gene31150-v1.0-hybrid
Fragaria vesca
gene31150-v1.0-hybrid
I
0.878
SapurV1A.2115s0010
Salix purpurea
SapurV1A.2115s0010
I
0.878
GLYMA19G36421
Glycine max
GLYMA19G36421
I
0.878
SapurV1A.1058s0080
Salix purpurea
SapurV1A.1058s0080
I
0.878
TCM_029796
Theobroma cacao
TCM_029796
I
0.877
cassava35701.valid.m1
Manihot esculenta
cassava35701.valid.m1
I
0.877
PK08629.1
Cannabis sativa
PK08629.1
I
0.877
GLYMA05G15533
Glycine max
GLYMA05G15533
I
0.877
Traes_2AS_125195CDF
Triticum aestivum
Traes_2AS_125195CDF
N
0.876
evm.TU.contig_33298
Carica papaya
evm.TU.contig_33298
I
0.876
Traes_2DS_5DF921ABB
Triticum aestivum
Traes_2DS_5DF921ABB
I
0.874
Ca_16379
Cicer arietinum
Ca_16379
I
0.874
Traes_6AS_6F89CC969
Triticum aestivum
Traes_6AS_6F89CC969
I
0.874
F775_14365
Aegilops tauschii
F775_14365
I
0.874
F775_16000
Aegilops tauschii
F775_16000
I
0.874
Traes_6DS_90A627C3F
Triticum aestivum
Traes_6DS_90A627C3F
I
0.874
Ciclev10020717m.g
Citrus clementina
Ciclev10020717m.g
I
0.874
BRADI1G24390
Brachypodium distachyon
BRADI1G24390
I
0.874
Traes_2AS_09457EDD8
Triticum aestivum
Traes_2AS_09457EDD8
I
0.874
MLOC_8116
Hordeum vulgare
MLOC_8116
I
0.874
orange1.1g017665m.g
Citrus sinensis
orange1.1g017665m.g
I
0.874
Lus10036117.g
Linum usitatissimum
Lus10036117.g
I
0.873
GSMUA_Achr9G19520_001
Musa acuminata
GSMUA_Achr9G19520_001
I
0.873
29950.m001173
Ricinus communis
29950.m001173
I
0.873
POPTR_0001s41490
Populus trichocarpa
POPTR_0001s41490
I
0.872
SELMODRAFT_133982
Selaginella moellendorffii
SELMODRAFT_133982
I
0.872
SapurV1A.2174s0010
Salix purpurea
SapurV1A.2174s0010
I
0.872
GLYMA03G33690
Glycine max
GLYMA03G33690
I
0.872
SELMODRAFT_47266
Selaginella moellendorffii
SELMODRAFT_47266
I
0.872
Pm011604
Prunus mume
Pm011604
I
0.872
SapurV1A.0127s0010
Salix purpurea
SapurV1A.0127s0010
I
0.872
PRUPE_ppa007577mg
Prunus persica
PRUPE_ppa007577mg
I
0.872
SapurV1A.0746s0010
Salix purpurea
SapurV1A.0746s0010
I
0.872
BRADI1G53770
Brachypodium distachyon
BRADI1G53770
I
0.871
POPTR_0011s04650
Populus trichocarpa
POPTR_0011s04650
I
0.871