POPTR_0019s09400 (Populus trichocarpa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 POPTR_0019s09400 T295358_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BRN2
M07217_2.00 		Arabidopsis thaliana
CKTVHDNNNYAMGYWA
TWRCKTRNNNHDBAMG		 Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a 		0.939 0.912
BRN2
M07218_2.00 		Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH
DDTWRCKTRHDNHDBAMGHWA		 Dap-seq
OMalley et al.(2016)
ANAC070_col 		0.939 0.912
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s09400.1 NAC/NAM 11 138

Links

Other NAC/NAM family TFs
Other Populus trichocarpa TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0907s0070 Salix purpurea SapurV1A.0907s0070 I 0.970
Pm022820 Prunus mume Pm022820 I 0.949
29382.m000084 Ricinus communis 29382.m000084 I 0.949
orange1.1g042376m.g Citrus sinensis orange1.1g042376m.g I 0.949
MDP0000558493 Malus domestica MDP0000558493 I 0.949
Lus10013782.g Linum usitatissimum Lus10013782.g I 0.949
Lus10039153.g Linum usitatissimum Lus10039153.g I 0.949
PRUPE_ppa026376mg Prunus persica PRUPE_ppa026376mg I 0.949
gene31175-v1.0-hybrid Fragaria vesca gene31175-v1.0-hybrid I 0.949
Gorai.004G267300 Gossypium raimondii Gorai.004G267300 I 0.949
Ciclev10024588m.g Citrus clementina Ciclev10024588m.g I 0.949
VIT_18s0089g01120 Vitis vinifera VIT_18s0089g01120 I 0.948
Eucgr.F04097 Eucalyptus grandis Eucgr.F04097 I 0.946
GLYMA09G36820 Glycine max GLYMA09G36820 I 0.946
MDP0000257674 Malus domestica MDP0000257674 I 0.945
Cla012576 Citrullus lanatus Cla012576 I 0.943
Ca_15792 Cicer arietinum Ca_15792 I 0.943
Cucsa.237820 Cucumis sativus Cucsa.237820 I 0.943
MTR_4g035590 Medicago truncatula MTR_4g035590 I 0.943
TCM_036034 Theobroma cacao TCM_036034 I 0.941
Aquca_014_00032 Aquilegia coerulea Aquca_014_00032 I 0.939
BRN2 Arabidopsis thaliana AT4G10350 D 0.939
Thhalv10029403m.g Eutrema salsugineum Thhalv10029403m.g I 0.939
Bra037914 Brassica rapa Bra037914 I 0.939
ANAC070 Arabidopsis lyrata Al_scaffold_0006_3164 I 0.939
Bo9g088300 Brassica oleracea Bo9g088300 I 0.939
GLYMA12G00540 Glycine max GLYMA12G00540 I 0.938
AMTR_s00099p00131560 Amborella trichopoda AMTR_s00099p00131560 I 0.934
Cagra.12686s0005 Capsella grandiflora Cagra.12686s0005 I 0.933
Carubv10003879m.g Capsella rubella Carubv10003879m.g I 0.933
Bostr.25463s0283 Boechera stricta Bostr.25463s0283 I 0.933
OGLUM04G13590 Oryza glumaepatula OGLUM04G13590 I 0.932
Pavir.Gb01599 Panicum virgatum Pavir.Gb01599 I 0.932
Pavir.J07268 Panicum virgatum Pavir.J07268 I 0.932
Sb06g017720 Sorghum bicolor Sb06g017720 I 0.932
Si012319m.g Setaria italica Si012319m.g I 0.932
OB04G21050 Oryza brachyantha OB04G21050 I 0.932
ONIVA04G12040 Oryza nivara ONIVA04G12040 I 0.931
Bra000709 Brassica rapa Bra000709 I 0.931
BGIOSGA034998 Oryza indica BGIOSGA034998 I 0.931
BGIOSGA015018 Oryza indica BGIOSGA015018 I 0.931
GRMZM2G099144 Zea mays GRMZM2G099144 I 0.931
OBART04G13830 Oryza barthii OBART04G13830 I 0.931
OLONG_020428 Oryza longistaminata OLONG_020428 I 0.931
Thhalv10008226m.g Eutrema salsugineum Thhalv10008226m.g I 0.930
ORUFI04G15090 Oryza rufipogon ORUFI04G15090 I 0.929
Carubv10010920m.g Capsella rubella Carubv10010920m.g I 0.928
Cagra.6133s0030 Capsella grandiflora Cagra.6133s0030 I 0.928
Traes_2BL_209C14A8F Triticum aestivum Traes_2BL_209C14A8F I 0.928
Traes_2DL_70F83D4B9 Triticum aestivum Traes_2DL_70F83D4B9 I 0.928
Traes_2AL_F0B17F0EA Triticum aestivum Traes_2AL_F0B17F0EA I 0.928
F775_23174 Aegilops tauschii F775_23174 I 0.928
BRADI5G11247 Brachypodium distachyon BRADI5G11247 I 0.928
MLOC_19175 Hordeum vulgare MLOC_19175 I 0.928
BRN1 Arabidopsis thaliana AT1G33280 I 0.928
ANAC015 Arabidopsis lyrata fgenesh2_kg.1__3458__AT1G33280.1 I 0.927
Bostr.3359s0042 Boechera stricta Bostr.3359s0042 I 0.927
cassava4621.m1 Manihot esculenta cassava4621.m1 I 0.926
GRMZM2G435824 Zea mays GRMZM2G435824 I 0.924
GSMUA_Achr6G28890_001 Musa acuminata GSMUA_Achr6G28890_001 I 0.923
POPTR_0013s09280 Populus trichocarpa POPTR_0013s09280 I 0.922
TRIUR3_28259 Triticum urartu TRIUR3_28259 I 0.921
SapurV1A.1219s0030 Salix purpurea SapurV1A.1219s0030 I 0.920
Solyc06g063430.1 Solanum lycopersicum Solyc06g063430.1 I 0.920
mgf017656m Mimulus guttatus mgf017656m I 0.914
Solyc08g008660.2 Solanum lycopersicum Solyc08g008660.2 I 0.881
PGSC0003DMG400005807 Solanum tuberosum PGSC0003DMG400005807 I 0.881
Pm010886 Prunus mume Pm010886 I 0.872
29725.m000235 Ricinus communis 29725.m000235 I 0.872
Ca_13929 Cicer arietinum Ca_13929 I 0.872
gene19898-v1.0-hybrid Fragaria vesca gene19898-v1.0-hybrid I 0.872
PRUPE_ppa025341mg Prunus persica PRUPE_ppa025341mg I 0.872
TCM_033728 Theobroma cacao TCM_033728 I 0.871
Gorai.004G268500 Gossypium raimondii Gorai.004G268500 I 0.870