CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.5325s0008
(
Boechera stricta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Bostr.5325s0008
T297320_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.875
0.431
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.5325s0008.1.p
NAC/NAM
1
135
MSRYTFNPPEEELITYFLNNKITKNDDLVGRQITEVNICLHEPAELPGLAKIESSHTWYFISPVEKFGRLSRTKRASRTGYWKITGNSRTIKDVDGNPIGLKKFLVFQENKRSSTSSSTTSKQYKSKWIIHEFHS
Links
Other
NAC/NAM
family TFs
Other
Boechera stricta
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.5325s0018
Boechera stricta
Bostr.5325s0018
I
0.994
anac049
Arabidopsis lyrata
Al_scaffold_0001_135
N
0.990
Cagra.1968s0044
Capsella grandiflora
Cagra.1968s0044
N
0.984
Carubv10011623m.g
Capsella rubella
Carubv10011623m.g
N
0.984
anac049
Arabidopsis thaliana
AT3G04430
N
0.984
Bra033297
Brassica rapa
Bra033297
N
0.983
Bo5g002870
Brassica oleracea
Bo5g002870
N
0.981
SapurV1A.0162s0450
Salix purpurea
SapurV1A.0162s0450
I
0.909
Bo00853s060
Brassica oleracea
Bo00853s060
I
0.905
MDP0000575835
Malus domestica
MDP0000575835
I
0.893
Bostr.4825s0023
Boechera stricta
Bostr.4825s0023
I
0.882
Carubv10003260m.g
Capsella rubella
Carubv10003260m.g
I
0.878
Bra008553
Brassica rapa
Bra008553
I
0.878
POPTR_0002s15560
Populus trichocarpa
POPTR_0002s15560
I
0.877
anac069
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002854
I
0.875
NAC69
Arabidopsis thaliana
AT4G01550
D
0.875
MTR_8g023860
Medicago truncatula
MTR_8g023860
I
0.872
Bostr.5325s0009
Boechera stricta
Bostr.5325s0009
I
0.871