CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000575835
(
Malus domestica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
MDP0000575835
T298570_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.923
0.487
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.874
0.400
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.874
0.400
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.874
0.400
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000575835
NAC/NAM
19
146
PVGYRFHPTEEELISHYLKLKLRGKDSLVSDAIREINICNYEPRELPEISLIKSDDEWYFYNRPIYKKNSRNEVERATATGFWKSTGKEKIVKARDNKIIGKKRILTFRQGRGRNAPITNWVMHEFSI
Links
Other
NAC/NAM
family TFs
Other
Malus domestica
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000214515
Malus domestica
MDP0000214515
I
0.989
MDP0000311190
Malus domestica
MDP0000311190
I
0.984
MDP0000231843
Malus domestica
MDP0000231843
I
0.970
SapurV1A.0321s0350
Salix purpurea
SapurV1A.0321s0350
I
0.951
POPTR_0014s10330
Populus trichocarpa
POPTR_0014s10330
I
0.950
MDP0000282616
Malus domestica
MDP0000282616
I
0.950
SapurV1A.0321s0360
Salix purpurea
SapurV1A.0321s0360
I
0.948
SapurV1A.0321s0340
Salix purpurea
SapurV1A.0321s0340
I
0.948
POPTR_0014s10360
Populus trichocarpa
POPTR_0014s10360
I
0.947
POPTR_0014s10350
Populus trichocarpa
POPTR_0014s10350
I
0.947
POPTR_0002s18310
Populus trichocarpa
POPTR_0002s18310
I
0.945
POPTR_0014s07210
Populus trichocarpa
POPTR_0014s07210
I
0.945
POPTR_0002s18290
Populus trichocarpa
POPTR_0002s18290
I
0.938
SapurV1A.0003s0330
Salix purpurea
SapurV1A.0003s0330
I
0.938
SapurV1A.0586s0170
Salix purpurea
SapurV1A.0586s0170
I
0.934
SapurV1A.0024s0340
Salix purpurea
SapurV1A.0024s0340
I
0.933
MDP0000274989
Malus domestica
MDP0000274989
N
0.930
Bo9g004070
Brassica oleracea
Bo9g004070
I
0.929
Bra036328
Brassica rapa
Bra036328
I
0.929
SapurV1A.0162s0450
Salix purpurea
SapurV1A.0162s0450
I
0.929
POPTR_0002s15560
Populus trichocarpa
POPTR_0002s15560
I
0.925
anac069
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002854
I
0.923
NAC69
Arabidopsis thaliana
AT4G01550
D
0.923
gene18589-v1.0-hybrid
Fragaria vesca
gene18589-v1.0-hybrid
N
0.923
F775_13961
Aegilops tauschii
F775_13961
I
0.922
Thhalv10028684m.g
Eutrema salsugineum
Thhalv10028684m.g
I
0.922
Bo9g004090
Brassica oleracea
Bo9g004090
I
0.921
Bra036327
Brassica rapa
Bra036327
I
0.921
Bo6g119080
Brassica oleracea
Bo6g119080
I
0.921
Bostr.5325s0009
Boechera stricta
Bostr.5325s0009
I
0.919
Carubv10003260m.g
Capsella rubella
Carubv10003260m.g
I
0.919
Bo9g004100
Brassica oleracea
Bo9g004100
I
0.919
Bostr.4825s0023
Boechera stricta
Bostr.4825s0023
I
0.918
GSMUA_Achr11G07800_001
Musa acuminata
GSMUA_Achr11G07800_001
N
0.918
30076.m004475
Ricinus communis
30076.m004475
N
0.916
PRUPE_ppa019780mg
Prunus persica
PRUPE_ppa019780mg
N
0.913
PRUPE_ppa022384mg
Prunus persica
PRUPE_ppa022384mg
I
0.911
Bra008553
Brassica rapa
Bra008553
I
0.911
Pm028722
Prunus mume
Pm028722
I
0.909
cassava39381.m1
Manihot esculenta
cassava39381.m1
N
0.909
Carubv10000489m.g
Capsella rubella
Carubv10000489m.g
I
0.909
Bo00853s060
Brassica oleracea
Bo00853s060
I
0.908
POPTR_0002s18320
Populus trichocarpa
POPTR_0002s18320
I
0.908
OS08G0157900
Oryza sativa
OS08G0157900
I
0.905
ORUFI08G03870
Oryza rufipogon
ORUFI08G03870
I
0.905
ONIVA08G03440
Oryza nivara
ONIVA08G03440
I
0.905
mgf015836m
Mimulus guttatus
mgf015836m
I
0.905
BGIOSGA027623
Oryza indica
BGIOSGA027623
I
0.905
BRADI4G37327
Brachypodium distachyon
BRADI4G37327
I
0.904
Bo9g004110
Brassica oleracea
Bo9g004110
I
0.904
MTR_2g068920
Medicago truncatula
MTR_2g068920
I
0.903
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
0.903
Bostr.5325s0019
Boechera stricta
Bostr.5325s0019
I
0.899
Ca_20988
Cicer arietinum
Ca_20988
I
0.898
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.898
PRUPE_ppa023197mg
Prunus persica
PRUPE_ppa023197mg
N
0.898
Pavir.Fb00405
Panicum virgatum
Pavir.Fb00405
I
0.897
Sb07g003900
Sorghum bicolor
Sb07g003900
I
0.897
ANAC001
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1000119
I
0.897
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.896
LPERR08G03510
Leersia perrieri
LPERR08G03510
I
0.896
MTR_2g068880
Medicago truncatula
MTR_2g068880
I
0.896
GSMUA_Achr3G00330_001
Musa acuminata
GSMUA_Achr3G00330_001
I
0.895
BRADI3G16480
Brachypodium distachyon
BRADI3G16480
I
0.894
OB08G13730
Oryza brachyantha
OB08G13730
I
0.893
Bostr.5325s0008
Boechera stricta
Bostr.5325s0008
I
0.893
Traes_5BL_8BE382FE3
Triticum aestivum
Traes_5BL_8BE382FE3
I
0.893
Traes_5DL_B69423A67
Triticum aestivum
Traes_5DL_B69423A67
I
0.893
TRIUR3_13805
Triticum urartu
TRIUR3_13805
I
0.893
MLOC_37843
Hordeum vulgare
MLOC_37843
I
0.893
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.892
Bostr.5325s0018
Boechera stricta
Bostr.5325s0018
I
0.892
OGLUM08G03540
Oryza glumaepatula
OGLUM08G03540
I
0.892
OMERI08G03500
Oryza meridionalis
OMERI08G03500
I
0.892
OBART08G03460
Oryza barthii
OBART08G03460
I
0.892
Thhalv10007665m.g
Eutrema salsugineum
Thhalv10007665m.g
I
0.892
OPUNC08G03310
Oryza punctata
OPUNC08G03310
I
0.892
OLONG_000105
Oryza longistaminata
OLONG_000105
I
0.892
ORGLA08G0029000
Oryza glaberrima
ORGLA08G0029000
I
0.892
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
0.892
Pavir.Fa01901
Panicum virgatum
Pavir.Fa01901
I
0.891
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.891
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
0.891
Si013369m.g
Setaria italica
Si013369m.g
I
0.891
Sb02g032230
Sorghum bicolor
Sb02g032230
I
0.890
LPERR09G14720
Leersia perrieri
LPERR09G14720
I
0.890
Bra027596
Brassica rapa
Bra027596
I
0.890
Pavir.Bb02626
Panicum virgatum
Pavir.Bb02626
I
0.889
Pavir.Ba01386
Panicum virgatum
Pavir.Ba01386
I
0.889
Si032702m.g
Setaria italica
Si032702m.g
I
0.888
OGLUM09G19480
Oryza glumaepatula
OGLUM09G19480
I
0.888
ONIVA09G20130
Oryza nivara
ONIVA09G20130
I
0.888
ORGLA09G0151800
Oryza glaberrima
ORGLA09G0151800
I
0.888
OB09G25590
Oryza brachyantha
OB09G25590
I
0.888
OMERI09G14170
Oryza meridionalis
OMERI09G14170
I
0.888
BGIOSGA031230
Oryza indica
BGIOSGA031230
I
0.888
ORUFI05G18190
Oryza rufipogon
ORUFI05G18190
I
0.887
Pm018442
Prunus mume
Pm018442
N
0.886
Traes_7AL_669D4AE47
Triticum aestivum
Traes_7AL_669D4AE47
I
0.886
Traes_7DL_AB67A0B36
Triticum aestivum
Traes_7DL_AB67A0B36
I
0.886
TRIUR3_32613
Triticum urartu
TRIUR3_32613
I
0.886
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
0.886
Traes_7BL_0C386426A
Triticum aestivum
Traes_7BL_0C386426A
I
0.886
F775_30082
Aegilops tauschii
F775_30082
I
0.886
MLOC_50406
Hordeum vulgare
MLOC_50406
I
0.886
PGSC0003DMG400000555
Solanum tuberosum
PGSC0003DMG400000555
I
0.885
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.885
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
0.885
GSMUA_AchrUn_randomG04060_001
Musa acuminata
GSMUA_AchrUn_randomG04060_001
I
0.884
mgf022344m
Mimulus guttatus
mgf022344m
I
0.884
Carubv10009049m.g
Capsella rubella
Carubv10009049m.g
I
0.883
Cagra.1968s0045
Capsella grandiflora
Cagra.1968s0045
I
0.883
cassava39379.m1
Manihot esculenta
cassava39379.m1
N
0.883
PK26157.1
Cannabis sativa
PK26157.1
I
0.882
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.882
Lus10005143.g
Linum usitatissimum
Lus10005143.g
N
0.882
Lus10030175.g
Linum usitatissimum
Lus10030175.g
N
0.882
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.880
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.879
Bra036326
Brassica rapa
Bra036326
I
0.879
Thhalv10012158m.g
Eutrema salsugineum
Thhalv10012158m.g
I
0.879
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
0.879
TCM_035160
Theobroma cacao
TCM_035160
I
0.879
Eucgr.J00531
Eucalyptus grandis
Eucgr.J00531
I
0.879
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.878
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.878
Bostr.5325s0010
Boechera stricta
Bostr.5325s0010
N
0.878
Bostr.10064s0010
Boechera stricta
Bostr.10064s0010
I
0.878
PRUPE_ppa017765mg
Prunus persica
PRUPE_ppa017765mg
I
0.878
Bo5g002810
Brassica oleracea
Bo5g002810
I
0.877
AMTR_s00022p00160350
Amborella trichopoda
AMTR_s00022p00160350
I
0.877
MDP0000626215
Malus domestica
MDP0000626215
N
0.877
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.877
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
0.877
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.877
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.874
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.874
Bra033239
Brassica rapa
Bra033239
I
0.874
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.874
Solyc03g080090.2
Solanum lycopersicum
Solyc03g080090.2
I
0.874
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.874
VIT_06s0004g00020
Vitis vinifera
VIT_06s0004g00020
I
0.874
Bostr.25375s0002
Boechera stricta
Bostr.25375s0002
I
0.874
NAC002
Arabidopsis thaliana
AT1G01720
D
0.874
Bo5g002850
Brassica oleracea
Bo5g002850
I
0.872
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.872
gene23394-v1.0-hybrid
Fragaria vesca
gene23394-v1.0-hybrid
N
0.871
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.871
SapurV1A.2021s0010
Salix purpurea
SapurV1A.2021s0010
I
0.871