POPTR_0002s18310 (Populus trichocarpa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 POPTR_0002s18310 T295226_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC69
M07216_2.00 		Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW		 Dap-seq
OMalley et al.(2016)
NTM2_col_b 		0.897 0.522
NAC002
M00970_2.00 		Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN		 PBM
Lindemose et al.(2014)
ATAF1 		0.873 0.443
NAC002
M07159_2.00 		Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM		 Dap-seq
OMalley et al.(2016)
ATAF1_col_a 		0.873 0.443
NAC002
M07160_2.00 		Arabidopsis thaliana
YACGY
RCGTR		 Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a 		0.873 0.443
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s18310.1 NAC/NAM 12 141

Links

Other NAC/NAM family TFs
Other Populus trichocarpa TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I 0.993
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I 0.986
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I 0.985
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I 0.985
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I 0.984
SapurV1A.0321s0350 Salix purpurea SapurV1A.0321s0350 I 0.984
SapurV1A.0321s0340 Salix purpurea SapurV1A.0321s0340 I 0.984
SapurV1A.0321s0360 Salix purpurea SapurV1A.0321s0360 I 0.984
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I 0.981
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.980
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I 0.976
POPTR_0002s15560 Populus trichocarpa POPTR_0002s15560 I 0.970
PGSC0003DMG400000555 Solanum tuberosum PGSC0003DMG400000555 I 0.954
Solyc03g080090.2 Solanum lycopersicum Solyc03g080090.2 I 0.949
MDP0000575835 Malus domestica MDP0000575835 I 0.945
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.938
POPTR_0002s18320 Populus trichocarpa POPTR_0002s18320 I 0.935
GSMUA_Achr11G07800_001 Musa acuminata GSMUA_Achr11G07800_001 N 0.933
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.932
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.930
Sb07g003900 Sorghum bicolor Sb07g003900 I 0.930
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I 0.929
Ca_20988 Cicer arietinum Ca_20988 I 0.924
SapurV1A.0003s0330 Salix purpurea SapurV1A.0003s0330 I 0.924
Pm019659 Prunus mume Pm019659 I 0.923
MTR_5g069030 Medicago truncatula MTR_5g069030 I 0.922
F775_13961 Aegilops tauschii F775_13961 I 0.921
mgf022344m Mimulus guttatus mgf022344m I 0.920
Thhalv10007665m.g Eutrema salsugineum Thhalv10007665m.g I 0.920
BRADI3G16480 Brachypodium distachyon BRADI3G16480 I 0.920
Si013369m.g Setaria italica Si013369m.g I 0.919
GSMUA_AchrUn_randomG04060_001 Musa acuminata GSMUA_AchrUn_randomG04060_001 I 0.919
Pavir.Fa01901 Panicum virgatum Pavir.Fa01901 I 0.918
PRUPE_ppa023197mg Prunus persica PRUPE_ppa023197mg N 0.917
Traes_7AL_669D4AE47 Triticum aestivum Traes_7AL_669D4AE47 I 0.916
Traes_7BL_0C386426A Triticum aestivum Traes_7BL_0C386426A I 0.916
Traes_7DL_AB67A0B36 Triticum aestivum Traes_7DL_AB67A0B36 I 0.916
TRIUR3_32613 Triticum urartu TRIUR3_32613 I 0.916
MLOC_50406 Hordeum vulgare MLOC_50406 I 0.916
MDP0000214515 Malus domestica MDP0000214515 I 0.916
GSMUA_Achr3G00330_001 Musa acuminata GSMUA_Achr3G00330_001 I 0.916
F775_30082 Aegilops tauschii F775_30082 I 0.916
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I 0.915
Carubv10009049m.g Capsella rubella Carubv10009049m.g I 0.915
LPERR08G03510 Leersia perrieri LPERR08G03510 I 0.915
ANAC001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000119 I 0.914
BGIOSGA027623 Oryza indica BGIOSGA027623 I 0.913
Ca_27204 Cicer arietinum Ca_27204 I 0.913
OPUNC08G03310 Oryza punctata OPUNC08G03310 I 0.913
OMERI08G03500 Oryza meridionalis OMERI08G03500 I 0.913
Pavir.Fb00405 Panicum virgatum Pavir.Fb00405 I 0.913
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I 0.913
OLONG_000105 Oryza longistaminata OLONG_000105 I 0.913
ORGLA08G0029000 Oryza glaberrima ORGLA08G0029000 I 0.913
OS08G0157900 Oryza sativa OS08G0157900 I 0.913
ONIVA08G03440 Oryza nivara ONIVA08G03440 I 0.913
OBART08G03460 Oryza barthii OBART08G03460 I 0.913
OGLUM08G03540 Oryza glumaepatula OGLUM08G03540 I 0.913
OB08G13730 Oryza brachyantha OB08G13730 I 0.912
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.910
Pm018442 Prunus mume Pm018442 N 0.906
gene18589-v1.0-hybrid Fragaria vesca gene18589-v1.0-hybrid N 0.904
Solyc06g073050.2 Solanum lycopersicum Solyc06g073050.2 N 0.903
mgf015836m Mimulus guttatus mgf015836m I 0.903
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.903
GLYMA14G36840 Glycine max GLYMA14G36840 I 0.903
30076.m004475 Ricinus communis 30076.m004475 N 0.903
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.901
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I 0.899
Bra036327 Brassica rapa Bra036327 I 0.899
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.899
Bo9g004100 Brassica oleracea Bo9g004100 I 0.898
PRUPE_ppa019780mg Prunus persica PRUPE_ppa019780mg N 0.898
Bostr.5325s0011 Boechera stricta Bostr.5325s0011 I 0.897
NAC69 Arabidopsis thaliana AT4G01550 D 0.897
Pavir.Ea03621 Panicum virgatum Pavir.Ea03621 I 0.897
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.897
MDP0000311190 Malus domestica MDP0000311190 I 0.897
Bo9g004070 Brassica oleracea Bo9g004070 I 0.896
GRMZM2G003715 Zea mays GRMZM2G003715 I 0.895
Bo00853s060 Brassica oleracea Bo00853s060 I 0.895
Carubv10000489m.g Capsella rubella Carubv10000489m.g I 0.895
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.894
PRUPE_ppa019241mg Prunus persica PRUPE_ppa019241mg N 0.894
ORUFI05G18190 Oryza rufipogon ORUFI05G18190 I 0.894
Bra008553 Brassica rapa Bra008553 I 0.894
VIT_15s0048g02300 Vitis vinifera VIT_15s0048g02300 N 0.893
Ca_04069 Cicer arietinum Ca_04069 I 0.893
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.893
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.893
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.892
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.892
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.892
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.892
MTR_3g093050 Medicago truncatula MTR_3g093050 I 0.891
mgf013201m Mimulus guttatus mgf013201m I 0.891
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.891
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.890
Traes_4AL_22CE41C6F Triticum aestivum Traes_4AL_22CE41C6F N 0.890
MLOC_75297 Hordeum vulgare MLOC_75297 N 0.890
Si032702m.g Setaria italica Si032702m.g I 0.890
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.889
MDP0000907489 Malus domestica MDP0000907489 N 0.889
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.888
chr1.LjT41E18.160.nc Lotus japonicus chr1.LjT41E18.160.nc I 0.887
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.887
Carubv10009451m.g Capsella rubella Carubv10009451m.g I 0.887
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.886
Lus10015587.g Linum usitatissimum Lus10015587.g I 0.886
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.886
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.886
Bra036328 Brassica rapa Bra036328 I 0.886
Pm028712 Prunus mume Pm028712 N 0.886
Lus10032919.g Linum usitatissimum Lus10032919.g I 0.886
PRUPE_ppa016876mg Prunus persica PRUPE_ppa016876mg N 0.886
Bo5g002810 Brassica oleracea Bo5g002810 I 0.886
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.885
Bo5g002850 Brassica oleracea Bo5g002850 I 0.885
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I 0.885
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.885
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I 0.885
GSMUA_Achr2G11810_001 Musa acuminata GSMUA_Achr2G11810_001 I 0.884
TCM_015535 Theobroma cacao TCM_015535 I 0.883
SapurV1A.0003s0310 Salix purpurea SapurV1A.0003s0310 N 0.882
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I 0.882
MTR_8g023860 Medicago truncatula MTR_8g023860 I 0.882
Eucgr.G01066 Eucalyptus grandis Eucgr.G01066 N 0.881
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.881
OB09G25590 Oryza brachyantha OB09G25590 I 0.881
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.881
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.881
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.881
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.881
Lus10005143.g Linum usitatissimum Lus10005143.g N 0.880
Lus10030175.g Linum usitatissimum Lus10030175.g N 0.880
Bra027596 Brassica rapa Bra027596 I 0.880
Bostr.10064s0010 Boechera stricta Bostr.10064s0010 I 0.880
BGIOSGA026695 Oryza indica BGIOSGA026695 I 0.880
ONIVA08G22710 Oryza nivara ONIVA08G22710 I 0.880
ORUFI08G22550 Oryza rufipogon ORUFI08G22550 I 0.879
OS06G0101800 Oryza sativa OS06G0101800 N 0.879
BGIOSGA022116 Oryza indica BGIOSGA022116 N 0.879
OGLUM08G21360 Oryza glumaepatula OGLUM08G21360 I 0.879
OGLUM06G00040 Oryza glumaepatula OGLUM06G00040 N 0.879
Pm018445 Prunus mume Pm018445 N 0.879
OLONG_004904 Oryza longistaminata OLONG_004904 N 0.879
ORGLA08G0177600 Oryza glaberrima ORGLA08G0177600 I 0.879
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.879
OPUNC06G00030 Oryza punctata OPUNC06G00030 N 0.879
OS08G0511200 Oryza sativa OS08G0511200 I 0.879
ORUFI06G00070 Oryza rufipogon ORUFI06G00070 N 0.879
OBART06G00060 Oryza barthii OBART06G00060 N 0.879
ORGLA06G0000500 Oryza glaberrima ORGLA06G0000500 N 0.879
ONIVA06G00080 Oryza nivara ONIVA06G00080 N 0.879
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.878
Eucgr.G01548 Eucalyptus grandis Eucgr.G01548 N 0.878
MLOC_13932 Hordeum vulgare MLOC_13932 I 0.877
GSMUA_Achr1G03560_001 Musa acuminata GSMUA_Achr1G03560_001 I 0.877
OPUNC08G18240 Oryza punctata OPUNC08G18240 I 0.877
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I 0.877
LPERR08G17020 Leersia perrieri LPERR08G17020 I 0.876
Bo6g119080 Brassica oleracea Bo6g119080 I 0.875
Eucgr.G01067 Eucalyptus grandis Eucgr.G01067 N 0.875
LPERR05G13490 Leersia perrieri LPERR05G13490 I 0.875
Bo9g004090 Brassica oleracea Bo9g004090 I 0.875
GSMUA_Achr6G18720_001 Musa acuminata GSMUA_Achr6G18720_001 I 0.874
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I 0.874
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I 0.873
NAC002 Arabidopsis thaliana AT1G01720 D 0.873
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I 0.873
Bo5g001100 Brassica oleracea Bo5g001100 I 0.873
Bra033239 Brassica rapa Bra033239 I 0.873
Carubv10009926m.g Capsella rubella Carubv10009926m.g I 0.873
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I 0.871
PGSC0003DMG402027023 Solanum tuberosum PGSC0003DMG402027023 N 0.871
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I 0.871
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I 0.871