CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0014s10330
(
Populus trichocarpa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
POPTR_0014s10330
T295326_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.921
0.539
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.904
0.504
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.904
0.504
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.904
0.504
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.900
0.496
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0014s10330.1
NAC/NAM
7
137
PVGYGFHPTDEELVTYYLRFKMHGGYEQEVSIIAEANVCDYEPWVLPELSAIKEPNDPECYFFCPRSYKYANSDRANRTTQAGYWKVTGKDRIVKTKTTKEHIATKKTLVFYEGRVPNGIKTNWIMHEYHP
Links
Other
NAC/NAM
family TFs
Other
Populus trichocarpa
TFs
248 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0014s10350
Populus trichocarpa
POPTR_0014s10350
I
0.995
POPTR_0014s10360
Populus trichocarpa
POPTR_0014s10360
I
0.995
SapurV1A.0321s0350
Salix purpurea
SapurV1A.0321s0350
I
0.988
POPTR_0002s18290
Populus trichocarpa
POPTR_0002s18290
I
0.988
SapurV1A.0321s0340
Salix purpurea
SapurV1A.0321s0340
I
0.986
SapurV1A.0321s0360
Salix purpurea
SapurV1A.0321s0360
I
0.986
POPTR_0002s18310
Populus trichocarpa
POPTR_0002s18310
I
0.986
POPTR_0014s07210
Populus trichocarpa
POPTR_0014s07210
I
0.984
SapurV1A.0162s0450
Salix purpurea
SapurV1A.0162s0450
I
0.982
SapurV1A.0586s0170
Salix purpurea
SapurV1A.0586s0170
I
0.980
SapurV1A.0024s0340
Salix purpurea
SapurV1A.0024s0340
I
0.979
POPTR_0002s15560
Populus trichocarpa
POPTR_0002s15560
I
0.974
MDP0000575835
Malus domestica
MDP0000575835
I
0.950
MDP0000214515
Malus domestica
MDP0000214515
I
0.949
F775_13961
Aegilops tauschii
F775_13961
I
0.948
GSMUA_Achr11G07800_001
Musa acuminata
GSMUA_Achr11G07800_001
N
0.946
Sb07g003900
Sorghum bicolor
Sb07g003900
I
0.945
Solyc03g080090.2
Solanum lycopersicum
Solyc03g080090.2
I
0.945
PGSC0003DMG400000555
Solanum tuberosum
PGSC0003DMG400000555
I
0.944
BRADI4G37327
Brachypodium distachyon
BRADI4G37327
I
0.939
Si013369m.g
Setaria italica
Si013369m.g
I
0.939
Pavir.Fa01901
Panicum virgatum
Pavir.Fa01901
I
0.938
BRADI3G16480
Brachypodium distachyon
BRADI3G16480
I
0.938
mgf013201m
Mimulus guttatus
mgf013201m
I
0.937
OMERI08G03500
Oryza meridionalis
OMERI08G03500
I
0.936
ONIVA08G03440
Oryza nivara
ONIVA08G03440
I
0.936
GSMUA_Achr3G00330_001
Musa acuminata
GSMUA_Achr3G00330_001
I
0.936
OLONG_000105
Oryza longistaminata
OLONG_000105
I
0.936
OBART08G03460
Oryza barthii
OBART08G03460
I
0.936
OPUNC08G03310
Oryza punctata
OPUNC08G03310
I
0.936
OGLUM08G03540
Oryza glumaepatula
OGLUM08G03540
I
0.936
OB08G13730
Oryza brachyantha
OB08G13730
I
0.936
ORUFI08G03870
Oryza rufipogon
ORUFI08G03870
I
0.936
BGIOSGA027623
Oryza indica
BGIOSGA027623
I
0.936
OS08G0157900
Oryza sativa
OS08G0157900
I
0.936
ORGLA08G0029000
Oryza glaberrima
ORGLA08G0029000
I
0.936
Traes_7AL_669D4AE47
Triticum aestivum
Traes_7AL_669D4AE47
I
0.935
MLOC_50406
Hordeum vulgare
MLOC_50406
I
0.935
Traes_7DL_AB67A0B36
Triticum aestivum
Traes_7DL_AB67A0B36
I
0.935
TRIUR3_32613
Triticum urartu
TRIUR3_32613
I
0.935
Traes_7BL_0C386426A
Triticum aestivum
Traes_7BL_0C386426A
I
0.935
PRUPE_ppa017765mg
Prunus persica
PRUPE_ppa017765mg
I
0.935
F775_30082
Aegilops tauschii
F775_30082
I
0.935
Pavir.Fb00405
Panicum virgatum
Pavir.Fb00405
I
0.934
LPERR08G03510
Leersia perrieri
LPERR08G03510
I
0.934
Si032702m.g
Setaria italica
Si032702m.g
I
0.932
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
0.932
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
0.932
SapurV1A.0003s0330
Salix purpurea
SapurV1A.0003s0330
I
0.932
Sb02g032230
Sorghum bicolor
Sb02g032230
I
0.931
Bo9g004100
Brassica oleracea
Bo9g004100
I
0.930
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.930
LPERR09G14720
Leersia perrieri
LPERR09G14720
I
0.929
Bostr.5325s0009
Boechera stricta
Bostr.5325s0009
I
0.929
Pavir.Ba01386
Panicum virgatum
Pavir.Ba01386
I
0.929
Pavir.Bb02626
Panicum virgatum
Pavir.Bb02626
I
0.929
TRIUR3_13805
Triticum urartu
TRIUR3_13805
I
0.927
MLOC_37843
Hordeum vulgare
MLOC_37843
I
0.927
Traes_5DL_B69423A67
Triticum aestivum
Traes_5DL_B69423A67
I
0.927
Traes_5BL_8BE382FE3
Triticum aestivum
Traes_5BL_8BE382FE3
I
0.927
ORGLA09G0151800
Oryza glaberrima
ORGLA09G0151800
I
0.926
OB09G25590
Oryza brachyantha
OB09G25590
I
0.926
OGLUM09G19480
Oryza glumaepatula
OGLUM09G19480
I
0.926
OMERI09G14170
Oryza meridionalis
OMERI09G14170
I
0.926
BGIOSGA031230
Oryza indica
BGIOSGA031230
I
0.926
ONIVA09G20130
Oryza nivara
ONIVA09G20130
I
0.926
GSMUA_AchrUn_randomG04060_001
Musa acuminata
GSMUA_AchrUn_randomG04060_001
I
0.924
Bostr.5325s0019
Boechera stricta
Bostr.5325s0019
I
0.923
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.922
Thhalv10012158m.g
Eutrema salsugineum
Thhalv10012158m.g
I
0.922
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.922
MDP0000311190
Malus domestica
MDP0000311190
I
0.921
NAC69
Arabidopsis thaliana
AT4G01550
D
0.921
anac069
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002854
I
0.921
Bra008553
Brassica rapa
Bra008553
I
0.920
Pavir.Ea03621
Panicum virgatum
Pavir.Ea03621
I
0.920
POPTR_0002s18320
Populus trichocarpa
POPTR_0002s18320
I
0.919
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.919
Aquca_009_00966
Aquilegia coerulea
Aquca_009_00966
I
0.919
Solyc04g009440.2
Solanum lycopersicum
Solyc04g009440.2
I
0.919
Carubv10003260m.g
Capsella rubella
Carubv10003260m.g
I
0.918
Thhalv10028684m.g
Eutrema salsugineum
Thhalv10028684m.g
I
0.918
gene18589-v1.0-hybrid
Fragaria vesca
gene18589-v1.0-hybrid
N
0.916
Bostr.4825s0023
Boechera stricta
Bostr.4825s0023
I
0.916
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.915
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
0.915
SapurV1A.0311s0230
Salix purpurea
SapurV1A.0311s0230
I
0.913
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.913
Eucgr.G01066
Eucalyptus grandis
Eucgr.G01066
N
0.913
POPTR_0005s07060
Populus trichocarpa
POPTR_0005s07060
I
0.913
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
0.912
Bra036328
Brassica rapa
Bra036328
I
0.912
Sb02g006680
Sorghum bicolor
Sb02g006680
I
0.911
Bra036327
Brassica rapa
Bra036327
I
0.911
GRMZM2G079632
Zea mays
GRMZM2G079632
I
0.911
GRMZM2G162739
Zea mays
GRMZM2G162739
I
0.911
Thhalv10007665m.g
Eutrema salsugineum
Thhalv10007665m.g
I
0.911
TCM_035160
Theobroma cacao
TCM_035160
I
0.910
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.910
mgf022344m
Mimulus guttatus
mgf022344m
I
0.909
Bo00853s060
Brassica oleracea
Bo00853s060
I
0.908
Carubv10009049m.g
Capsella rubella
Carubv10009049m.g
I
0.908
Cagra.1968s0045
Capsella grandiflora
Cagra.1968s0045
I
0.908
POPTR_0007s04780
Populus trichocarpa
POPTR_0007s04780
I
0.907
mgf015836m
Mimulus guttatus
mgf015836m
I
0.907
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.907
Pm019659
Prunus mume
Pm019659
I
0.906
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.906
Ca_20988
Cicer arietinum
Ca_20988
I
0.906
Bo9g004070
Brassica oleracea
Bo9g004070
I
0.906
NAC002
Arabidopsis thaliana
AT1G01720
D
0.904
PRUPE_ppa019780mg
Prunus persica
PRUPE_ppa019780mg
N
0.904
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.904
Bra033239
Brassica rapa
Bra033239
I
0.904
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.904
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.904
cassava29774.valid.m1
Manihot esculenta
cassava29774.valid.m1
I
0.904
cassava29775.valid.m1
Manihot esculenta
cassava29775.valid.m1
I
0.904
OPUNC08G18240
Oryza punctata
OPUNC08G18240
I
0.904
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.904
ANAC001
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1000119
I
0.903
SapurV1A.0003s0310
Salix purpurea
SapurV1A.0003s0310
N
0.903
MLOC_13932
Hordeum vulgare
MLOC_13932
I
0.902
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.902
MTR_5g069030
Medicago truncatula
MTR_5g069030
I
0.902
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
0.901
gene35014-v1.0-hybrid
Fragaria vesca
gene35014-v1.0-hybrid
I
0.901
BRADI2G57100
Brachypodium distachyon
BRADI2G57100
I
0.901
MLOC_59162
Hordeum vulgare
MLOC_59162
I
0.901
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
0.901
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.901
PK26157.1
Cannabis sativa
PK26157.1
I
0.901
OBART01G39590
Oryza barthii
OBART01G39590
I
0.900
GRMZM2G014653
Zea mays
GRMZM2G014653
I
0.900
OPUNC01G38300
Oryza punctata
OPUNC01G38300
I
0.900
OMERI01G36460
Oryza meridionalis
OMERI01G36460
I
0.900
OB01G48340
Oryza brachyantha
OB01G48340
I
0.900
ONIVA01G44460
Oryza nivara
ONIVA01G44460
I
0.900
NAC48
Oryza sativa
OS01G0884300
D
0.900
OGLUM01G43820
Oryza glumaepatula
OGLUM01G43820
I
0.900
BGIOSGA000374
Oryza indica
BGIOSGA000374
I
0.900
LPERR01G34090
Leersia perrieri
LPERR01G34090
I
0.900
ORGLA01G0334900
Oryza glaberrima
ORGLA01G0334900
I
0.900
ORUFI01G42940
Oryza rufipogon
ORUFI01G42940
I
0.900
Bo6g119080
Brassica oleracea
Bo6g119080
I
0.899
Bo9g004090
Brassica oleracea
Bo9g004090
I
0.899
Sb03g041920
Sorghum bicolor
Sb03g041920
I
0.899
LPERR07G06440
Leersia perrieri
LPERR07G06440
I
0.899
Lus10030175.g
Linum usitatissimum
Lus10030175.g
N
0.899
Si002413m.g
Setaria italica
Si002413m.g
I
0.899
Lus10005143.g
Linum usitatissimum
Lus10005143.g
N
0.899
GRMZM2G003715
Zea mays
GRMZM2G003715
I
0.899
PRUPE_ppa023197mg
Prunus persica
PRUPE_ppa023197mg
N
0.898
ONIVA08G22710
Oryza nivara
ONIVA08G22710
I
0.898
BGIOSGA026695
Oryza indica
BGIOSGA026695
I
0.898
Ca_27204
Cicer arietinum
Ca_27204
I
0.898
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
0.898
OS08G0511200
Oryza sativa
OS08G0511200
I
0.897
ORGLA08G0177600
Oryza glaberrima
ORGLA08G0177600
I
0.897
ORUFI08G22550
Oryza rufipogon
ORUFI08G22550
I
0.897
OGLUM08G21360
Oryza glumaepatula
OGLUM08G21360
I
0.897
GSMUA_Achr6G18720_001
Musa acuminata
GSMUA_Achr6G18720_001
I
0.897
AMTR_s00022p00160350
Amborella trichopoda
AMTR_s00022p00160350
I
0.897
GSMUA_Achr4G02390_001
Musa acuminata
GSMUA_Achr4G02390_001
I
0.897
TRIUR3_14109
Triticum urartu
TRIUR3_14109
I
0.896
TRAES3BF002300010CFD_g
Triticum aestivum
TRAES3BF002300010CFD_g
I
0.896
F775_28813
Aegilops tauschii
F775_28813
I
0.896
Pm018442
Prunus mume
Pm018442
N
0.896
Pavir.Ba03301
Panicum virgatum
Pavir.Ba03301
I
0.895
OB05G24820
Oryza brachyantha
OB05G24820
I
0.895
Si030752m.g
Setaria italica
Si030752m.g
I
0.895
LPERR08G17020
Leersia perrieri
LPERR08G17020
I
0.895
Cagra.27691s0001
Capsella grandiflora
Cagra.27691s0001
I
0.894
Pavir.Bb00806
Panicum virgatum
Pavir.Bb00806
I
0.894
mgf004020m
Mimulus guttatus
mgf004020m
I
0.893
GSMUA_Achr7G23250_001
Musa acuminata
GSMUA_Achr7G23250_001
I
0.893
Carubv10000489m.g
Capsella rubella
Carubv10000489m.g
I
0.893
GLYMA14G36840
Glycine max
GLYMA14G36840
I
0.892
ORUFI05G18190
Oryza rufipogon
ORUFI05G18190
I
0.891
VIT_15s0048g02300
Vitis vinifera
VIT_15s0048g02300
N
0.890
ORGLA05G0146600
Oryza glaberrima
ORGLA05G0146600
I
0.889
ONIVA05G17670
Oryza nivara
ONIVA05G17670
I
0.889
OGLUM05G17980
Oryza glumaepatula
OGLUM05G17980
I
0.889
BGIOSGA019897
Oryza indica
BGIOSGA019897
I
0.889
LPERR05G13490
Leersia perrieri
LPERR05G13490
I
0.888
Pm018445
Prunus mume
Pm018445
N
0.888
fgenesh1_pg.scaffold_182000024
Physcomitrella patens
fgenesh1_pg.scaffold_182000024
I
0.888
SELMODRAFT_86855
Selaginella moellendorffii
SELMODRAFT_86855
I
0.887
Eucgr.G01548
Eucalyptus grandis
Eucgr.G01548
N
0.887
SELMODRAFT_71307
Selaginella moellendorffii
SELMODRAFT_71307
I
0.887
Carubv10009451m.g
Capsella rubella
Carubv10009451m.g
I
0.887
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.887
Eucgr.G01067
Eucalyptus grandis
Eucgr.G01067
N
0.884
Bra027596
Brassica rapa
Bra027596
I
0.884
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.884
GLYMA05G32850
Glycine max
GLYMA05G32850
I
0.884
Bostr.5325s0011
Boechera stricta
Bostr.5325s0011
I
0.884
SapurV1A.2021s0010
Salix purpurea
SapurV1A.2021s0010
I
0.884
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
0.883
Eucgr.J00531
Eucalyptus grandis
Eucgr.J00531
I
0.883
MTR_8g094580
Medicago truncatula
MTR_8g094580
I
0.883
GRMZM2G139700
Zea mays
GRMZM2G139700
I
0.883
PRUPE_ppa022384mg
Prunus persica
PRUPE_ppa022384mg
I
0.882
OLONG_023103
Oryza longistaminata
OLONG_023103
I
0.881
gw1.1.690.1
Physcomitrella patens
gw1.1.690.1
I
0.881
MDP0000282616
Malus domestica
MDP0000282616
I
0.880
Solyc06g073050.2
Solanum lycopersicum
Solyc06g073050.2
N
0.880
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.879
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
0.879
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.879
Bostr.0556s0555
Boechera stricta
Bostr.0556s0555
I
0.879
30076.m004475
Ricinus communis
30076.m004475
N
0.879
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
0.878
GSMUA_Achr2G11810_001
Musa acuminata
GSMUA_Achr2G11810_001
I
0.878
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
0.878
Lus10015587.g
Linum usitatissimum
Lus10015587.g
I
0.878
PRUPE_ppa019241mg
Prunus persica
PRUPE_ppa019241mg
N
0.878
cassava33016.m1
Manihot esculenta
cassava33016.m1
N
0.878
MTR_8g023930
Medicago truncatula
MTR_8g023930
I
0.877
gw1.6.394.1
Physcomitrella patens
gw1.6.394.1
I
0.877
MDP0000231843
Malus domestica
MDP0000231843
I
0.877
cassava39379.m1
Manihot esculenta
cassava39379.m1
N
0.877
OPUNC10G03390
Oryza punctata
OPUNC10G03390
N
0.877
Gorai.006G203800
Gossypium raimondii
Gorai.006G203800
I
0.876
TCM_015535
Theobroma cacao
TCM_015535
I
0.875
MTR_3g093050
Medicago truncatula
MTR_3g093050
I
0.875
Bostr.25375s0002
Boechera stricta
Bostr.25375s0002
I
0.874
Eucgr.G01550
Eucalyptus grandis
Eucgr.G01550
N
0.874
MLOC_65286
Hordeum vulgare
MLOC_65286
I
0.873
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
0.873
F775_20638
Aegilops tauschii
F775_20638
I
0.873
Gorai.004G125900
Gossypium raimondii
Gorai.004G125900
I
0.872
MLOC_25708
Hordeum vulgare
MLOC_25708
N
0.872
Bo5g002810
Brassica oleracea
Bo5g002810
I
0.872
Ca_04069
Cicer arietinum
Ca_04069
I
0.872
OLONG_004904
Oryza longistaminata
OLONG_004904
N
0.871
OGLUM06G00040
Oryza glumaepatula
OGLUM06G00040
N
0.871
GLYMA12G31211
Glycine max
GLYMA12G31211
I
0.871
Thhalv10023502m.g
Eutrema salsugineum
Thhalv10023502m.g
I
0.871
OBART06G00060
Oryza barthii
OBART06G00060
N
0.871
ORGLA06G0000500
Oryza glaberrima
ORGLA06G0000500
N
0.871
BGIOSGA022116
Oryza indica
BGIOSGA022116
N
0.871
Bo5g002850
Brassica oleracea
Bo5g002850
I
0.871
OS06G0101800
Oryza sativa
OS06G0101800
N
0.871
ORUFI06G00070
Oryza rufipogon
ORUFI06G00070
N
0.871
ONIVA06G00080
Oryza nivara
ONIVA06G00080
N
0.871
OPUNC06G00030
Oryza punctata
OPUNC06G00030
N
0.871
NAC026
Arabidopsis thaliana
AT1G62700
I
0.871