Bo9g004090 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo9g004090 T292471_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC69
M07216_2.00 		Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW		 Dap-seq
OMalley et al.(2016)
NTM2_col_b 		0.976 0.704
NAC68
M07214_2.00 		Arabidopsis thaliana
RCTTVYNBNNYAAGY
RCTTRNNVNRBAAGY		 Dap-seq
OMalley et al.(2016)
NTM1_col_a 		0.923 0.696
NAC68
M07215_2.00 		Arabidopsis thaliana
HDYYRCTTTTTNNHYHYHNNN
NNNDRDRDNNAAAAAGYRRHD		 Dap-seq
OMalley et al.(2016)
NTM1_colamp_a 		0.923 0.696
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g004090.1 NAC/NAM 5 135

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo6g119080 Brassica oleracea Bo6g119080 I 0.996
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.979
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.976
NAC69 Arabidopsis thaliana AT4G01550 D 0.976
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.976
Bra008553 Brassica rapa Bra008553 I 0.973
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.969
Bra036328 Brassica rapa Bra036328 I 0.968
Bo00853s060 Brassica oleracea Bo00853s060 I 0.967
Bo9g004110 Brassica oleracea Bo9g004110 I 0.965
Bo9g004070 Brassica oleracea Bo9g004070 I 0.961
Bo9g004100 Brassica oleracea Bo9g004100 I 0.959
Carubv10000489m.g Capsella rubella Carubv10000489m.g I 0.958
Bra036326 Brassica rapa Bra036326 I 0.958
Bra036327 Brassica rapa Bra036327 I 0.952
ANAC001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000119 I 0.942
Cagra.12529s0001 Capsella grandiflora Cagra.12529s0001 I 0.935
Bo5g002850 Brassica oleracea Bo5g002850 I 0.935
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I 0.932
Bra027596 Brassica rapa Bra027596 I 0.931
Bo9g061230 Brassica oleracea Bo9g061230 I 0.931
Bo5g002810 Brassica oleracea Bo5g002810 I 0.927
NAC68 Arabidopsis thaliana AT4G01540 D 0.923
Thhalv10007665m.g Eutrema salsugineum Thhalv10007665m.g I 0.923
MDP0000575835 Malus domestica MDP0000575835 I 0.921
MDP0000214515 Malus domestica MDP0000214515 I 0.920
Bostr.4825s0021 Boechera stricta Bostr.4825s0021 I 0.920
MDP0000282616 Malus domestica MDP0000282616 I 0.917
Carubv10009451m.g Capsella rubella Carubv10009451m.g I 0.912
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.910
Bostr.10064s0010 Boechera stricta Bostr.10064s0010 I 0.910
gene18589-v1.0-hybrid Fragaria vesca gene18589-v1.0-hybrid N 0.909
GSMUA_Achr11G07800_001 Musa acuminata GSMUA_Achr11G07800_001 N 0.909
SapurV1A.0003s0330 Salix purpurea SapurV1A.0003s0330 I 0.909
Carubv10009049m.g Capsella rubella Carubv10009049m.g I 0.905
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I 0.905
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I 0.899
anac067 Arabidopsis thaliana AT4G01520 I 0.897
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.896
Ca_20988 Cicer arietinum Ca_20988 I 0.895
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I 0.893
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I 0.893
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.892
fgenesh1_pg.C_scaffold_3000386 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000386 I 0.890
Bo5g002830 Brassica oleracea Bo5g002830 N 0.890
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.888
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I 0.887
PRUPE_ppa019780mg Prunus persica PRUPE_ppa019780mg N 0.887
gene35013-v1.0-hybrid Fragaria vesca gene35013-v1.0-hybrid N 0.885
gene35014-v1.0-hybrid Fragaria vesca gene35014-v1.0-hybrid I 0.883
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I 0.880
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I 0.879
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I 0.877
Bostr.5325s0011 Boechera stricta Bostr.5325s0011 I 0.876
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I 0.875
Pm028722 Prunus mume Pm028722 I 0.875
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I 0.874
GRMZM2G139700 Zea mays GRMZM2G139700 I 0.874
mgf022344m Mimulus guttatus mgf022344m I 0.873
MDP0000311190 Malus domestica MDP0000311190 I 0.873
MDP0000231843 Malus domestica MDP0000231843 I 0.872