gene35014-v1.0-hybrid (Fragaria vesca)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 gene35014-v1.0-hybrid T298033_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC002
M00970_2.00 		Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN		 PBM
Lindemose et al.(2014)
ATAF1 		0.878 0.459
NAC002
M07159_2.00 		Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM		 Dap-seq
OMalley et al.(2016)
ATAF1_col_a 		0.878 0.459
NAC002
M07160_2.00 		Arabidopsis thaliana
YACGY
RCGTR		 Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a 		0.878 0.459
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna35014.1-v1.0-hybrid NAC/NAM 9 151

Links

Other NAC/NAM family TFs
Other Fragaria vesca TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene35013-v1.0-hybrid Fragaria vesca gene35013-v1.0-hybrid N 0.988
gene34006-v1.0-hybrid Fragaria vesca gene34006-v1.0-hybrid N 0.986
gene34004-v1.0-hybrid Fragaria vesca gene34004-v1.0-hybrid N 0.970
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.936
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.936
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.936
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.936
gene18589-v1.0-hybrid Fragaria vesca gene18589-v1.0-hybrid N 0.932
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.930
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.929
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.929
Si032702m.g Setaria italica Si032702m.g I 0.929
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.929
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.929
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.929
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.926
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.926
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.926
OB09G25590 Oryza brachyantha OB09G25590 I 0.926
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.926
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.926
GSMUA_Achr11G07800_001 Musa acuminata GSMUA_Achr11G07800_001 N 0.918
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.916
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I 0.916
SapurV1A.0321s0340 Salix purpurea SapurV1A.0321s0340 I 0.912
SapurV1A.0321s0360 Salix purpurea SapurV1A.0321s0360 I 0.912
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I 0.910
SapurV1A.0321s0350 Salix purpurea SapurV1A.0321s0350 I 0.908
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I 0.906
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I 0.906
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.906
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I 0.906
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I 0.905
F775_13961 Aegilops tauschii F775_13961 I 0.902
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.901
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I 0.901
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.901
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I 0.901
mgf013201m Mimulus guttatus mgf013201m I 0.898
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I 0.892
Bostr.0556s0555 Boechera stricta Bostr.0556s0555 I 0.892
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.891
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.890
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.890
Bo9g004110 Brassica oleracea Bo9g004110 I 0.889
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.889
LPERR07G06440 Leersia perrieri LPERR07G06440 I 0.888
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I 0.886
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.885
mgf022344m Mimulus guttatus mgf022344m I 0.884
Bo9g004090 Brassica oleracea Bo9g004090 I 0.883
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I 0.883
Bo6g119080 Brassica oleracea Bo6g119080 I 0.883
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I 0.883
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.881
MDP0000282616 Malus domestica MDP0000282616 I 0.881
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I 0.880
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I 0.878
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I 0.878
Carubv10009926m.g Capsella rubella Carubv10009926m.g I 0.878
TCM_035160 Theobroma cacao TCM_035160 I 0.878
GLYMA14G24220 Glycine max GLYMA14G24220 I 0.878
Bra033239 Brassica rapa Bra033239 I 0.878
NAC002 Arabidopsis thaliana AT1G01720 D 0.878
Bo5g001100 Brassica oleracea Bo5g001100 I 0.878
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I 0.878
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I 0.878
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I 0.877
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I 0.877
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.877
GRMZM2G139700 Zea mays GRMZM2G139700 I 0.876
Eucgr.F01463 Eucalyptus grandis Eucgr.F01463 I 0.876
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I 0.876
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I 0.876
LPERR08G17020 Leersia perrieri LPERR08G17020 I 0.875
Bo9g004070 Brassica oleracea Bo9g004070 I 0.874
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.874
Pavir.Ea03621 Panicum virgatum Pavir.Ea03621 I 0.874
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I 0.874
Traes_7AL_74CC91D39 Triticum aestivum Traes_7AL_74CC91D39 I 0.873
POPTR_0002s18320 Populus trichocarpa POPTR_0002s18320 I 0.873
F775_20638 Aegilops tauschii F775_20638 I 0.873
GLYMA12G31211 Glycine max GLYMA12G31211 I 0.872
PRUPE_ppa019780mg Prunus persica PRUPE_ppa019780mg N 0.872
Bra036328 Brassica rapa Bra036328 I 0.872