POPTR_0002s18320 (Populus trichocarpa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 POPTR_0002s18320 T295227_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC69
M07216_2.00 		Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW		 Dap-seq
OMalley et al.(2016)
NTM2_col_b 		0.911 0.477
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s18320.1 NAC/NAM 31 150

Links

Other NAC/NAM family TFs
Other Populus trichocarpa TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0003s0310 Salix purpurea SapurV1A.0003s0310 N 0.964
SapurV1A.0003s0330 Salix purpurea SapurV1A.0003s0330 I 0.939
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I 0.939
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.935
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I 0.935
SapurV1A.0321s0340 Salix purpurea SapurV1A.0321s0340 I 0.933
SapurV1A.0321s0360 Salix purpurea SapurV1A.0321s0360 I 0.933
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I 0.931
SapurV1A.0321s0350 Salix purpurea SapurV1A.0321s0350 I 0.931
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I 0.929
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.927
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.927
AMTR_s00018p00074980 Amborella trichopoda AMTR_s00018p00074980 I 0.921
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I 0.920
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I 0.920
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I 0.919
Bo9g004070 Brassica oleracea Bo9g004070 I 0.916
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.913
cassava29775.valid.m1 Manihot esculenta cassava29775.valid.m1 I 0.913
Bostr.0556s0555 Boechera stricta Bostr.0556s0555 I 0.913
GLYMA14G36840 Glycine max GLYMA14G36840 I 0.913
cassava29774.valid.m1 Manihot esculenta cassava29774.valid.m1 I 0.913
Ca_20988 Cicer arietinum Ca_20988 I 0.912
Bra036328 Brassica rapa Bra036328 I 0.912
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.911
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I 0.911
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.911
Carubv10009049m.g Capsella rubella Carubv10009049m.g I 0.911
NAC69 Arabidopsis thaliana AT4G01550 D 0.911
Bo00853s060 Brassica oleracea Bo00853s060 I 0.910
Bra008553 Brassica rapa Bra008553 I 0.910
mgf022344m Mimulus guttatus mgf022344m I 0.910
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.909
PGSC0003DMG400000555 Solanum tuberosum PGSC0003DMG400000555 I 0.909
Carubv10009451m.g Capsella rubella Carubv10009451m.g I 0.909
MDP0000575835 Malus domestica MDP0000575835 I 0.908
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I 0.907
MTR_5g069030 Medicago truncatula MTR_5g069030 I 0.906
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.906
MDP0000282616 Malus domestica MDP0000282616 I 0.906
Eucgr.J00531 Eucalyptus grandis Eucgr.J00531 I 0.906
Ca_27204 Cicer arietinum Ca_27204 I 0.905
Pm019659 Prunus mume Pm019659 I 0.902
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I 0.902
Thhalv10007665m.g Eutrema salsugineum Thhalv10007665m.g I 0.900
Solyc03g080090.2 Solanum lycopersicum Solyc03g080090.2 I 0.900
TCM_015535 Theobroma cacao TCM_015535 I 0.899
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I 0.899
gene08448-v1.0-hybrid Fragaria vesca gene08448-v1.0-hybrid I 0.898
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.898
MTR_8g023860 Medicago truncatula MTR_8g023860 I 0.896
gene18589-v1.0-hybrid Fragaria vesca gene18589-v1.0-hybrid N 0.894
LPERR08G17020 Leersia perrieri LPERR08G17020 I 0.894
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I 0.894
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I 0.894
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.893
MLOC_13932 Hordeum vulgare MLOC_13932 I 0.893
MTR_3g093050 Medicago truncatula MTR_3g093050 I 0.890
LPERR04G17350 Leersia perrieri LPERR04G17350 I 0.890
Ca_04069 Cicer arietinum Ca_04069 I 0.890
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.889
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.889
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.889
Traes_4AL_22CE41C6F Triticum aestivum Traes_4AL_22CE41C6F N 0.889
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.889
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.889
MLOC_75297 Hordeum vulgare MLOC_75297 N 0.889
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I 0.888
Bra027596 Brassica rapa Bra027596 I 0.888
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I 0.887
BGIOSGA026695 Oryza indica BGIOSGA026695 I 0.887
ONIVA08G22710 Oryza nivara ONIVA08G22710 I 0.887
OPUNC08G18240 Oryza punctata OPUNC08G18240 I 0.887
Traes_7AL_74CC91D39 Triticum aestivum Traes_7AL_74CC91D39 I 0.886
F775_20638 Aegilops tauschii F775_20638 I 0.886
MLOC_65286 Hordeum vulgare MLOC_65286 I 0.886
Lus10032919.g Linum usitatissimum Lus10032919.g I 0.886
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.885
ORGLA08G0177600 Oryza glaberrima ORGLA08G0177600 I 0.885
OGLUM08G21360 Oryza glumaepatula OGLUM08G21360 I 0.885
ORUFI08G22550 Oryza rufipogon ORUFI08G22550 I 0.885
OS08G0511200 Oryza sativa OS08G0511200 I 0.885
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.884
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.884
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.884
OB09G25590 Oryza brachyantha OB09G25590 I 0.884
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.884
POPTR_0002s15560 Populus trichocarpa POPTR_0002s15560 I 0.884
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.884
GLYMA12G31211 Glycine max GLYMA12G31211 I 0.883
ANAC001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000119 I 0.882
gene35013-v1.0-hybrid Fragaria vesca gene35013-v1.0-hybrid N 0.882
Bo9g004110 Brassica oleracea Bo9g004110 I 0.882
Bo5g002850 Brassica oleracea Bo5g002850 I 0.882
chr1.LjT41E18.160.nc Lotus japonicus chr1.LjT41E18.160.nc I 0.881
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.881
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.880
PRUPE_ppa008321mg Prunus persica PRUPE_ppa008321mg N 0.878
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I 0.878
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.877
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.877
GRMZM2G003715 Zea mays GRMZM2G003715 I 0.877
GSMUA_AchrUn_randomG04060_001 Musa acuminata GSMUA_AchrUn_randomG04060_001 I 0.876
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I 0.876
LPERR07G06440 Leersia perrieri LPERR07G06440 I 0.876
Cagra.27691s0001 Capsella grandiflora Cagra.27691s0001 I 0.876
OBART06G00060 Oryza barthii OBART06G00060 N 0.875
OMERI06G00050 Oryza meridionalis OMERI06G00050 N 0.875
OS06G0101800 Oryza sativa OS06G0101800 N 0.875
OGLUM06G00040 Oryza glumaepatula OGLUM06G00040 N 0.875
BGIOSGA022116 Oryza indica BGIOSGA022116 N 0.875
ORUFI06G00070 Oryza rufipogon ORUFI06G00070 N 0.875
ORGLA06G0000500 Oryza glaberrima ORGLA06G0000500 N 0.875
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.875
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.875
ONIVA06G00080 Oryza nivara ONIVA06G00080 N 0.875
Si032702m.g Setaria italica Si032702m.g I 0.875
OLONG_004904 Oryza longistaminata OLONG_004904 N 0.875
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.875
VIT_06s0004g00020 Vitis vinifera VIT_06s0004g00020 I 0.874
Sb02g026510 Sorghum bicolor Sb02g026510 I 0.874
gene35014-v1.0-hybrid Fragaria vesca gene35014-v1.0-hybrid I 0.873
orange1.1g021772m.g Citrus sinensis orange1.1g021772m.g N 0.873
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.873
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I 0.872
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.872
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I 0.872
TCM_019937 Theobroma cacao TCM_019937 N 0.871
GSMUA_Achr3G00330_001 Musa acuminata GSMUA_Achr3G00330_001 I 0.871
GRMZM2G139700 Zea mays GRMZM2G139700 I 0.871