CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AMTR_s00018p00074980
(
Amborella trichopoda
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AMTR_s00018p00074980
T291976_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.911
0.509
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN08122
NAC/NAM
6
132
LPGFRFHPTDDELISHYLTKKINGKGDVQVIPEVDMCKCEPWDLPGKSPIKTRYPEWHFFCPRDIKYPNGRRSNRATAAGYWKATGKARKIKSKFHGFLIGTKRTLVFHEGRSPRKRTPWIMHEYRV
Links
Other
NAC/NAM
family TFs
Other
Amborella trichopoda
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.953
GSMUA_Achr3G00330_001
Musa acuminata
GSMUA_Achr3G00330_001
I
0.931
GRMZM2G003715
Zea mays
GRMZM2G003715
I
0.930
Gorai.006G203800
Gossypium raimondii
Gorai.006G203800
I
0.928
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.926
Bostr.0556s0555
Boechera stricta
Bostr.0556s0555
I
0.923
POPTR_0002s18320
Populus trichocarpa
POPTR_0002s18320
I
0.921
F775_30082
Aegilops tauschii
F775_30082
I
0.921
Bo9g004070
Brassica oleracea
Bo9g004070
I
0.921
TRIUR3_32613
Triticum urartu
TRIUR3_32613
I
0.921
MLOC_50406
Hordeum vulgare
MLOC_50406
I
0.921
Traes_7DL_AB67A0B36
Triticum aestivum
Traes_7DL_AB67A0B36
I
0.921
Traes_7AL_669D4AE47
Triticum aestivum
Traes_7AL_669D4AE47
I
0.921
Traes_7BL_0C386426A
Triticum aestivum
Traes_7BL_0C386426A
I
0.921
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
0.920
Pavir.Fb00405
Panicum virgatum
Pavir.Fb00405
I
0.919
OB08G13730
Oryza brachyantha
OB08G13730
I
0.918
MLOC_37843
Hordeum vulgare
MLOC_37843
I
0.918
ORGLA08G0029000
Oryza glaberrima
ORGLA08G0029000
I
0.918
Traes_5DL_B69423A67
Triticum aestivum
Traes_5DL_B69423A67
I
0.918
TRIUR3_13805
Triticum urartu
TRIUR3_13805
I
0.918
Traes_5BL_8BE382FE3
Triticum aestivum
Traes_5BL_8BE382FE3
I
0.918
OPUNC08G03310
Oryza punctata
OPUNC08G03310
I
0.918
OGLUM08G03540
Oryza glumaepatula
OGLUM08G03540
I
0.918
OMERI08G03500
Oryza meridionalis
OMERI08G03500
I
0.918
OBART08G03460
Oryza barthii
OBART08G03460
I
0.918
OLONG_000105
Oryza longistaminata
OLONG_000105
I
0.918
BRADI3G16480
Brachypodium distachyon
BRADI3G16480
I
0.916
OGLUM09G19480
Oryza glumaepatula
OGLUM09G19480
I
0.915
ORGLA09G0151800
Oryza glaberrima
ORGLA09G0151800
I
0.915
OB09G25590
Oryza brachyantha
OB09G25590
I
0.915
OMERI09G14170
Oryza meridionalis
OMERI09G14170
I
0.915
ONIVA09G20130
Oryza nivara
ONIVA09G20130
I
0.915
BGIOSGA031230
Oryza indica
BGIOSGA031230
I
0.915
Si013369m.g
Setaria italica
Si013369m.g
I
0.915
e_gw1.259.32.1
Physcomitrella patens
e_gw1.259.32.1
I
0.915
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
0.915
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
0.915
LPERR08G03510
Leersia perrieri
LPERR08G03510
I
0.914
Pavir.Fa01901
Panicum virgatum
Pavir.Fa01901
I
0.914
Bra036328
Brassica rapa
Bra036328
I
0.913
GSMUA_AchrUn_randomG04060_001
Musa acuminata
GSMUA_AchrUn_randomG04060_001
I
0.913
ONIVA08G03440
Oryza nivara
ONIVA08G03440
I
0.912
ORUFI08G03870
Oryza rufipogon
ORUFI08G03870
I
0.912
BGIOSGA027623
Oryza indica
BGIOSGA027623
I
0.912
Si032702m.g
Setaria italica
Si032702m.g
I
0.912
OS08G0157900
Oryza sativa
OS08G0157900
I
0.912
NAC69
Arabidopsis thaliana
AT4G01550
D
0.911
anac069
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002854
I
0.911
LPERR09G14720
Leersia perrieri
LPERR09G14720
I
0.910
Sb02g032230
Sorghum bicolor
Sb02g032230
I
0.910
Gorai.004G125900
Gossypium raimondii
Gorai.004G125900
I
0.909
PRUPE_ppa017765mg
Prunus persica
PRUPE_ppa017765mg
I
0.909
Pavir.Ba01386
Panicum virgatum
Pavir.Ba01386
I
0.909
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
0.909
Pavir.Bb02626
Panicum virgatum
Pavir.Bb02626
I
0.909
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.908
BRADI4G37327
Brachypodium distachyon
BRADI4G37327
I
0.907
Sb07g003900
Sorghum bicolor
Sb07g003900
I
0.907
Bostr.4825s0023
Boechera stricta
Bostr.4825s0023
I
0.906
Thhalv10012158m.g
Eutrema salsugineum
Thhalv10012158m.g
I
0.906
MDP0000282616
Malus domestica
MDP0000282616
I
0.903
SapurV1A.0024s0340
Salix purpurea
SapurV1A.0024s0340
I
0.902
GSMUA_Achr4G29170_001
Musa acuminata
GSMUA_Achr4G29170_001
I
0.901
GRMZM2G139700
Zea mays
GRMZM2G139700
I
0.901
F775_13961
Aegilops tauschii
F775_13961
I
0.899
GLYMA14G36840
Glycine max
GLYMA14G36840
I
0.898
Bostr.5325s0009
Boechera stricta
Bostr.5325s0009
I
0.898
GSMUA_Achr11G07800_001
Musa acuminata
GSMUA_Achr11G07800_001
N
0.898
Carubv10009451m.g
Capsella rubella
Carubv10009451m.g
I
0.896
mgf022344m
Mimulus guttatus
mgf022344m
I
0.895
MTR_1g008740
Medicago truncatula
MTR_1g008740
I
0.895
Lus10015587.g
Linum usitatissimum
Lus10015587.g
I
0.894
LPERR12G01440
Leersia perrieri
LPERR12G01440
I
0.893
ANAC001
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1000119
I
0.892
gene08448-v1.0-hybrid
Fragaria vesca
gene08448-v1.0-hybrid
I
0.892
AMTR_s00022p00160350
Amborella trichopoda
AMTR_s00022p00160350
I
0.891
GSMUA_Achr6G03200_001
Musa acuminata
GSMUA_Achr6G03200_001
N
0.891
POPTR_0014s07210
Populus trichocarpa
POPTR_0014s07210
I
0.891
OMERI06G00050
Oryza meridionalis
OMERI06G00050
N
0.891
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.890
SapurV1A.0586s0170
Salix purpurea
SapurV1A.0586s0170
I
0.890
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
0.889
F775_20638
Aegilops tauschii
F775_20638
I
0.889
Ca_27204
Cicer arietinum
Ca_27204
I
0.889
MLOC_65286
Hordeum vulgare
MLOC_65286
I
0.889
SapurV1A.0003s0330
Salix purpurea
SapurV1A.0003s0330
I
0.889
Solyc08g074300.2
Solanum lycopersicum
Solyc08g074300.2
I
0.889
TCM_015535
Theobroma cacao
TCM_015535
I
0.888
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.888
Bostr.5325s0019
Boechera stricta
Bostr.5325s0019
I
0.887
SapurV1A.0162s0450
Salix purpurea
SapurV1A.0162s0450
I
0.886
GLYMA12G31211
Glycine max
GLYMA12G31211
I
0.885
LPERR08G17020
Leersia perrieri
LPERR08G17020
I
0.885
Cagra.1968s0045
Capsella grandiflora
Cagra.1968s0045
I
0.885
Carubv10009049m.g
Capsella rubella
Carubv10009049m.g
I
0.885
PGSC0003DMG400029593
Solanum tuberosum
PGSC0003DMG400029593
I
0.884
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.883
Ca_20988
Cicer arietinum
Ca_20988
I
0.883
Bo5g002850
Brassica oleracea
Bo5g002850
I
0.882
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
0.882
VIT_15s0048g02320
Vitis vinifera
VIT_15s0048g02320
I
0.881
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
0.879
AMTR_s00082p00116910
Amborella trichopoda
AMTR_s00082p00116910
N
0.879
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.879
MLOC_13932
Hordeum vulgare
MLOC_13932
I
0.878
chr1.LjT41E18.160.nc
Lotus japonicus
chr1.LjT41E18.160.nc
I
0.878
Solyc04g009440.2
Solanum lycopersicum
Solyc04g009440.2
I
0.878
Carubv10003260m.g
Capsella rubella
Carubv10003260m.g
I
0.878
BGIOSGA026695
Oryza indica
BGIOSGA026695
I
0.877
POPTR_0002s18290
Populus trichocarpa
POPTR_0002s18290
I
0.877
ONIVA08G22710
Oryza nivara
ONIVA08G22710
I
0.877
OGLUM08G21360
Oryza glumaepatula
OGLUM08G21360
I
0.876
MTR_5g069030
Medicago truncatula
MTR_5g069030
I
0.876
ORGLA08G0177600
Oryza glaberrima
ORGLA08G0177600
I
0.876
OPUNC08G18240
Oryza punctata
OPUNC08G18240
I
0.876
ORUFI08G22550
Oryza rufipogon
ORUFI08G22550
I
0.876
OS08G0511200
Oryza sativa
OS08G0511200
I
0.876
Pm019659
Prunus mume
Pm019659
I
0.875
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
0.875
LPERR11G01300
Leersia perrieri
LPERR11G01300
I
0.875
SapurV1A.0321s0360
Salix purpurea
SapurV1A.0321s0360
I
0.874
Aquca_009_00966
Aquilegia coerulea
Aquca_009_00966
I
0.874
SapurV1A.0321s0340
Salix purpurea
SapurV1A.0321s0340
I
0.874
Eucgr.J00531
Eucalyptus grandis
Eucgr.J00531
I
0.873
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.872
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.871