Bostr.10064s0010 (Boechera stricta)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Bostr.10064s0010 T297240_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC69
M07216_2.00 		Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW		 Dap-seq
OMalley et al.(2016)
NTM2_col_b 		0.906 0.596
NAC68
M07214_2.00 		Arabidopsis thaliana
RCTTVYNBNNYAAGY
RCTTRNNVNRBAAGY		 Dap-seq
OMalley et al.(2016)
NTM1_col_a 		0.886 0.658
NAC68
M07215_2.00 		Arabidopsis thaliana
HDYYRCTTTTTNNHYHYHNNN
NNNDRDRDNNAAAAAGYRRHD		 Dap-seq
OMalley et al.(2016)
NTM1_colamp_a 		0.886 0.658
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.10064s0010.1.p NAC/NAM 1 131

Links

Other NAC/NAM family TFs
Other Boechera stricta TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10000489m.g Capsella rubella Carubv10000489m.g I 0.971
Bostr.4825s0021 Boechera stricta Bostr.4825s0021 I 0.970
Cagra.12529s0001 Capsella grandiflora Cagra.12529s0001 I 0.967
Bostr.4825s0024 Boechera stricta Bostr.4825s0024 N 0.961
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.933
Bo00853s060 Brassica oleracea Bo00853s060 I 0.931
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.917
Bra027596 Brassica rapa Bra027596 I 0.911
Bo9g004090 Brassica oleracea Bo9g004090 I 0.910
Bo6g119080 Brassica oleracea Bo6g119080 I 0.910
Bra008553 Brassica rapa Bra008553 I 0.908
Bra036328 Brassica rapa Bra036328 I 0.907
Bra036327 Brassica rapa Bra036327 I 0.906
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.906
NAC69 Arabidopsis thaliana AT4G01550 D 0.906
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.905
Bo9g004070 Brassica oleracea Bo9g004070 I 0.905
fgenesh1_pg.C_scaffold_3000386 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000386 I 0.902
Bo9g004110 Brassica oleracea Bo9g004110 I 0.901
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.898
Bo9g061230 Brassica oleracea Bo9g061230 I 0.895
Bostr.5325s0011 Boechera stricta Bostr.5325s0011 I 0.894
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I 0.890
anac067 Arabidopsis thaliana AT4G01520 I 0.886
NAC68 Arabidopsis thaliana AT4G01540 D 0.886
GSMUA_Achr11G07800_001 Musa acuminata GSMUA_Achr11G07800_001 N 0.881
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I 0.880
Bra036326 Brassica rapa Bra036326 I 0.878
MDP0000575835 Malus domestica MDP0000575835 I 0.878
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I 0.876
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.875
Bo5g002830 Brassica oleracea Bo5g002830 N 0.874
Bo9g004100 Brassica oleracea Bo9g004100 I 0.872