CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_2g068920
(
Medicago truncatula
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
MTR_2g068920
T293748_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB
VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
0.968
0.737
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.923
0.605
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.923
0.605
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.923
0.605
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.913
0.588
NAC101
M07241_2.00
Arabidopsis thaliana
TGCKTVNDNHNYAMG
CKTRNDNHNBAMGCA
Dap-seq
OMalley et al.(2016)
VND6_colamp_a
0.908
0.544
NAC101
M07242_2.00
Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN
NDWDRCKTRNNNHDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND6_col_v31
0.908
0.544
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES66406
NAC/NAM
22
151
LPGFRFHPTDEELVTFYLRRKLDKKPIAIDLIKQIDIYKYDPWDLPKVNIPGAEKEGYFFCQRGRKYRNSVRPNRVTGSGFWKATGIDKAIYSNGAEGNDCVGLKKTLVYYRGSAGKGTKTDWMMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Medicago truncatula
TFs
225 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_2g068880
Medicago truncatula
MTR_2g068880
I
0.995
Ca_13571
Cicer arietinum
Ca_13571
I
0.990
Cla023594
Citrullus lanatus
Cla023594
I
0.976
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.973
SapurV1A.0076s0070
Salix purpurea
SapurV1A.0076s0070
I
0.972
PGSC0003DMG400039898
Solanum tuberosum
PGSC0003DMG400039898
I
0.972
VIT_19s0027g00840
Vitis vinifera
VIT_19s0027g00840
I
0.971
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.971
VIT_19s0027g00910
Vitis vinifera
VIT_19s0027g00910
I
0.970
Bra034719
Brassica rapa
Bra034719
I
0.970
Thhalv10021225m.g
Eutrema salsugineum
Thhalv10021225m.g
I
0.969
fgenesh2_kg.3__1353__AT3G12910.1
Arabidopsis lyrata
fgenesh2_kg.3__1353__AT3G12910.1
I
0.969
Bo1g138800
Brassica oleracea
Bo1g138800
I
0.968
Bra039353
Brassica rapa
Bra039353
I
0.968
AT3G12910
Arabidopsis thaliana
AT3G12910
D
0.968
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.967
Gorai.010G171100
Gossypium raimondii
Gorai.010G171100
I
0.965
Carubv10014270m.g
Capsella rubella
Carubv10014270m.g
I
0.965
Cagra.5641s0055
Capsella grandiflora
Cagra.5641s0055
I
0.965
Bostr.3640s0064
Boechera stricta
Bostr.3640s0064
I
0.965
Gorai.010G236700
Gossypium raimondii
Gorai.010G236700
I
0.965
Eucgr.F01463
Eucalyptus grandis
Eucgr.F01463
I
0.964
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.963
SapurV1A.0059s0580
Salix purpurea
SapurV1A.0059s0580
I
0.960
TCM_029321
Theobroma cacao
TCM_029321
I
0.960
cassava39074.m1
Manihot esculenta
cassava39074.m1
I
0.959
POPTR_0003s14950
Populus trichocarpa
POPTR_0003s14950
I
0.959
Bo5g133050
Brassica oleracea
Bo5g133050
I
0.958
PRUPE_ppa017765mg
Prunus persica
PRUPE_ppa017765mg
I
0.958
F775_13961
Aegilops tauschii
F775_13961
I
0.957
TRIUR3_13805
Triticum urartu
TRIUR3_13805
I
0.955
MLOC_37843
Hordeum vulgare
MLOC_37843
I
0.955
Traes_5BL_8BE382FE3
Triticum aestivum
Traes_5BL_8BE382FE3
I
0.955
Traes_5DL_B69423A67
Triticum aestivum
Traes_5DL_B69423A67
I
0.955
Thhalv10012158m.g
Eutrema salsugineum
Thhalv10012158m.g
I
0.953
BRADI4G37327
Brachypodium distachyon
BRADI4G37327
I
0.951
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
0.950
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
0.950
Si022714m.g
Setaria italica
Si022714m.g
I
0.949
Pavir.Cb00167
Panicum virgatum
Pavir.Cb00167
I
0.948
OGLUM09G19480
Oryza glumaepatula
OGLUM09G19480
I
0.947
LPERR09G14720
Leersia perrieri
LPERR09G14720
I
0.947
OMERI09G14170
Oryza meridionalis
OMERI09G14170
I
0.947
Sb02g032230
Sorghum bicolor
Sb02g032230
I
0.947
ONIVA09G20130
Oryza nivara
ONIVA09G20130
I
0.947
Pavir.Ba01386
Panicum virgatum
Pavir.Ba01386
I
0.947
Si032702m.g
Setaria italica
Si032702m.g
I
0.947
Sb08g022560
Sorghum bicolor
Sb08g022560
I
0.947
ORGLA09G0151800
Oryza glaberrima
ORGLA09G0151800
I
0.947
BGIOSGA031230
Oryza indica
BGIOSGA031230
I
0.947
Cucsa.058780
Cucumis sativus
Cucsa.058780
I
0.947
OB09G25590
Oryza brachyantha
OB09G25590
I
0.947
Pavir.Bb02626
Panicum virgatum
Pavir.Bb02626
I
0.947
Bo3g065200
Brassica oleracea
Bo3g065200
I
0.946
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.946
Pavir.J31204
Panicum virgatum
Pavir.J31204
I
0.938
PK26157.1
Cannabis sativa
PK26157.1
I
0.930
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.930
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.930
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
0.929
Cla011742
Citrullus lanatus
Cla011742
I
0.929
Thhalv10023502m.g
Eutrema salsugineum
Thhalv10023502m.g
I
0.928
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
0.928
NAC026
Arabidopsis thaliana
AT1G62700
I
0.928
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.928
TCM_035160
Theobroma cacao
TCM_035160
I
0.926
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.926
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.925
GRMZM2G475014
Zea mays
GRMZM2G475014
I
0.925
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
0.924
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.924
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.924
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.923
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.923
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.923
NAC002
Arabidopsis thaliana
AT1G01720
D
0.923
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.923
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.923
Pavir.Ba02443
Panicum virgatum
Pavir.Ba02443
I
0.923
Bra033239
Brassica rapa
Bra033239
I
0.923
PGSC0003DMG400009920
Solanum tuberosum
PGSC0003DMG400009920
I
0.922
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
0.921
ORUFI05G18190
Oryza rufipogon
ORUFI05G18190
I
0.921
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
0.921
Pavir.Ea03621
Panicum virgatum
Pavir.Ea03621
I
0.921
gw1.1.690.1
Physcomitrella patens
gw1.1.690.1
I
0.920
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
0.920
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.920
MLOC_59162
Hordeum vulgare
MLOC_59162
I
0.920
gw1.6.394.1
Physcomitrella patens
gw1.6.394.1
I
0.919
fgenesh1_pg.scaffold_182000024
Physcomitrella patens
fgenesh1_pg.scaffold_182000024
I
0.918
mgf015836m
Mimulus guttatus
mgf015836m
I
0.918
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.917
mgf013201m
Mimulus guttatus
mgf013201m
I
0.917
Si036303m.g
Setaria italica
Si036303m.g
I
0.917
BRADI2G57100
Brachypodium distachyon
BRADI2G57100
I
0.917
TRIUR3_14109
Triticum urartu
TRIUR3_14109
I
0.916
TRAES3BF002300010CFD_g
Triticum aestivum
TRAES3BF002300010CFD_g
I
0.916
F775_28813
Aegilops tauschii
F775_28813
I
0.916
OB05G24820
Oryza brachyantha
OB05G24820
I
0.916
mgf002365m
Mimulus guttatus
mgf002365m
I
0.916
Pavir.Ib01528
Panicum virgatum
Pavir.Ib01528
I
0.916
LPERR12G01440
Leersia perrieri
LPERR12G01440
I
0.916
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
0.915
MTR_8g094580
Medicago truncatula
MTR_8g094580
I
0.914
OMERI01G36460
Oryza meridionalis
OMERI01G36460
I
0.913
OGLUM01G43820
Oryza glumaepatula
OGLUM01G43820
I
0.913
ONIVA01G44460
Oryza nivara
ONIVA01G44460
I
0.913
OPUNC01G38300
Oryza punctata
OPUNC01G38300
I
0.913
BGIOSGA000374
Oryza indica
BGIOSGA000374
I
0.913
OBART01G39590
Oryza barthii
OBART01G39590
I
0.913
LPERR01G34090
Leersia perrieri
LPERR01G34090
I
0.913
ORUFI01G42940
Oryza rufipogon
ORUFI01G42940
I
0.913
Sb03g041920
Sorghum bicolor
Sb03g041920
I
0.913
ORGLA01G0334900
Oryza glaberrima
ORGLA01G0334900
I
0.913
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.913
NAC48
Oryza sativa
OS01G0884300
D
0.913
OB01G48340
Oryza brachyantha
OB01G48340
I
0.913
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
0.912
BGIOSGA019897
Oryza indica
BGIOSGA019897
I
0.912
Si002413m.g
Setaria italica
Si002413m.g
I
0.912
GRMZM2G014653
Zea mays
GRMZM2G014653
I
0.912
OGLUM05G17980
Oryza glumaepatula
OGLUM05G17980
I
0.912
GLYMA05G32850
Glycine max
GLYMA05G32850
I
0.912
LPERR11G01300
Leersia perrieri
LPERR11G01300
I
0.912
ONIVA05G17670
Oryza nivara
ONIVA05G17670
I
0.912
ORGLA05G0146600
Oryza glaberrima
ORGLA05G0146600
I
0.912
TRIUR3_18561
Triticum urartu
TRIUR3_18561
I
0.911
VIT_06s0004g00020
Vitis vinifera
VIT_06s0004g00020
I
0.911
Bra029266
Brassica rapa
Bra029266
I
0.910
Bo3g107700
Brassica oleracea
Bo3g107700
I
0.910
Bo2g164090
Brassica oleracea
Bo2g164090
I
0.910
Thhalv10004488m.g
Eutrema salsugineum
Thhalv10004488m.g
I
0.910
Cagra.4003s0027
Capsella grandiflora
Cagra.4003s0027
I
0.909
Carubv10026697m.g
Capsella rubella
Carubv10026697m.g
I
0.909
SapurV1A.0003s0330
Salix purpurea
SapurV1A.0003s0330
I
0.909
NAC101
Arabidopsis thaliana
AT5G62380
D
0.908
VND6
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8001814
I
0.908
Bostr.0568s0569
Boechera stricta
Bostr.0568s0569
I
0.908
GSMUA_Achr6G18720_001
Musa acuminata
GSMUA_Achr6G18720_001
I
0.907
LPERR05G13490
Leersia perrieri
LPERR05G13490
I
0.907
Bra010077
Brassica rapa
Bra010077
I
0.905
SELMODRAFT_86855
Selaginella moellendorffii
SELMODRAFT_86855
I
0.903
SELMODRAFT_71307
Selaginella moellendorffii
SELMODRAFT_71307
I
0.903
MDP0000575835
Malus domestica
MDP0000575835
I
0.903
MLOC_37364
Hordeum vulgare
MLOC_37364
I
0.902
F775_11764
Aegilops tauschii
F775_11764
I
0.902
TRIUR3_29260
Triticum urartu
TRIUR3_29260
I
0.902
Traes_7DL_D05DA373C
Triticum aestivum
Traes_7DL_D05DA373C
I
0.902
Bra035896
Brassica rapa
Bra035896
I
0.901
GRMZM2G052239
Zea mays
GRMZM2G052239
I
0.900
Sb02g026510
Sorghum bicolor
Sb02g026510
I
0.900
Aquca_009_00966
Aquilegia coerulea
Aquca_009_00966
I
0.900
Bo9g014940
Brassica oleracea
Bo9g014940
I
0.899
Solyc04g009440.2
Solanum lycopersicum
Solyc04g009440.2
I
0.899
SapurV1A.0311s0230
Salix purpurea
SapurV1A.0311s0230
I
0.897
F775_20638
Aegilops tauschii
F775_20638
I
0.897
POPTR_0005s07060
Populus trichocarpa
POPTR_0005s07060
I
0.897
MLOC_65286
Hordeum vulgare
MLOC_65286
I
0.897
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
0.897
GSMUA_Achr7G23250_001
Musa acuminata
GSMUA_Achr7G23250_001
I
0.896
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.895
GSMUA_Achr4G02390_001
Musa acuminata
GSMUA_Achr4G02390_001
I
0.895
SapurV1A.2021s0010
Salix purpurea
SapurV1A.2021s0010
I
0.894
AMTR_s00022p00160350
Amborella trichopoda
AMTR_s00022p00160350
I
0.894
OMERI04G25730
Oryza meridionalis
OMERI04G25730
I
0.891
POPTR_0007s04780
Populus trichocarpa
POPTR_0007s04780
I
0.891
Traes_7DL_BDD45DB24
Triticum aestivum
Traes_7DL_BDD45DB24
I
0.890
TRIUR3_29250
Triticum urartu
TRIUR3_29250
I
0.890
MLOC_13932
Hordeum vulgare
MLOC_13932
I
0.890
F775_30297
Aegilops tauschii
F775_30297
I
0.890
Lus10003848.g
Linum usitatissimum
Lus10003848.g
I
0.890
OPUNC05G14600
Oryza punctata
OPUNC05G14600
I
0.889
ONIVA05G17220
Oryza nivara
ONIVA05G17220
I
0.889
ORGLA05G0143100
Oryza glaberrima
ORGLA05G0143100
I
0.889
OS05G0415400
Oryza sativa
OS05G0415400
I
0.889
OBART05G16540
Oryza barthii
OBART05G16540
I
0.889
BGIOSGA018048
Oryza indica
BGIOSGA018048
I
0.889
ORUFI05G17750
Oryza rufipogon
ORUFI05G17750
I
0.889
mgf004020m
Mimulus guttatus
mgf004020m
I
0.889
OGLUM05G17550
Oryza glumaepatula
OGLUM05G17550
I
0.889
SapurV1A.0024s0340
Salix purpurea
SapurV1A.0024s0340
I
0.888
LPERR08G17020
Leersia perrieri
LPERR08G17020
I
0.888
ORUFI08G22550
Oryza rufipogon
ORUFI08G22550
I
0.885
OS08G0511200
Oryza sativa
OS08G0511200
I
0.885
mgf002183m
Mimulus guttatus
mgf002183m
I
0.885
OGLUM08G21360
Oryza glumaepatula
OGLUM08G21360
I
0.885
BGIOSGA026695
Oryza indica
BGIOSGA026695
I
0.885
ONIVA08G22710
Oryza nivara
ONIVA08G22710
I
0.885
Traes_7BL_8A5D12EE1
Triticum aestivum
Traes_7BL_8A5D12EE1
I
0.885
ORGLA08G0177600
Oryza glaberrima
ORGLA08G0177600
I
0.885
Si022723m.g
Setaria italica
Si022723m.g
I
0.884
GRMZM2G162739
Zea mays
GRMZM2G162739
I
0.884
OPUNC08G18240
Oryza punctata
OPUNC08G18240
I
0.882
GRMZM2G079632
Zea mays
GRMZM2G079632
I
0.882
Sb02g006680
Sorghum bicolor
Sb02g006680
I
0.882
SapurV1A.0039s0530
Salix purpurea
SapurV1A.0039s0530
I
0.882
Thhalv10009466m.g
Eutrema salsugineum
Thhalv10009466m.g
I
0.881
LPERR07G06440
Leersia perrieri
LPERR07G06440
I
0.880
Gorai.006G088400
Gossypium raimondii
Gorai.006G088400
I
0.879
Pavir.Ba03301
Panicum virgatum
Pavir.Ba03301
I
0.878
ANAC011
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002601
I
0.877
Pavir.Bb00806
Panicum virgatum
Pavir.Bb00806
I
0.877
Bostr.3359s0109
Boechera stricta
Bostr.3359s0109
I
0.877
Gorai.009G309000
Gossypium raimondii
Gorai.009G309000
I
0.876
Si030752m.g
Setaria italica
Si030752m.g
I
0.876
LPERR04G17350
Leersia perrieri
LPERR04G17350
I
0.876
BGIOSGA014034
Oryza indica
BGIOSGA014034
I
0.875
ORUFI04G32410
Oryza rufipogon
ORUFI04G32410
I
0.875
ONIVA04G29890
Oryza nivara
ONIVA04G29890
I
0.875
OGLUM04G30580
Oryza glumaepatula
OGLUM04G30580
I
0.875
PRUPE_ppa019780mg
Prunus persica
PRUPE_ppa019780mg
N
0.875
OS04G0691300
Oryza sativa
OS04G0691300
I
0.875
ORGLA04G0270600
Oryza glaberrima
ORGLA04G0270600
I
0.875
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.874
Bo9g004070
Brassica oleracea
Bo9g004070
I
0.873
OMERI05G14410
Oryza meridionalis
OMERI05G14410
I
0.873
Pavir.J04049
Panicum virgatum
Pavir.J04049
I
0.872
Bo8g028730
Brassica oleracea
Bo8g028730
I
0.872
Bra035488
Brassica rapa
Bra035488
I
0.872
Bra036328
Brassica rapa
Bra036328
I
0.871
TCM_020125
Theobroma cacao
TCM_020125
I
0.871
SapurV1A.0321s0340
Salix purpurea
SapurV1A.0321s0340
I
0.871
SapurV1A.0321s0360
Salix purpurea
SapurV1A.0321s0360
I
0.871
GRMZM2G139700
Zea mays
GRMZM2G139700
I
0.870