Bo9g014940 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo9g014940 T292476_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC101
M07241_2.00
Arabidopsis thaliana
TGCKTVNDNHNYAMG

CKTRNDNHNBAMGCA
Dap-seq
OMalley et al.(2016)
VND6_colamp_a
0.993 0.956
NAC101
M07242_2.00
Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN

NDWDRCKTRNNNHDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND6_col_v31
0.993 0.956
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.879 0.579
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.879 0.579
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.879 0.579
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB

VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
0.879 0.535
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g014940.1 NAC/NAM 8 135

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

150 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra035896 Brassica rapa Bra035896 I 0.993
VND6 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001814 I 0.993
NAC101 Arabidopsis thaliana AT5G62380 D 0.993
Bostr.0568s0569 Boechera stricta Bostr.0568s0569 I 0.993
Cagra.4003s0027 Capsella grandiflora Cagra.4003s0027 I 0.992
Bo3g107700 Brassica oleracea Bo3g107700 I 0.992
Bra010077 Brassica rapa Bra010077 I 0.992
Thhalv10004488m.g Eutrema salsugineum Thhalv10004488m.g I 0.992
Bo2g164090 Brassica oleracea Bo2g164090 I 0.992
Bra029266 Brassica rapa Bra029266 I 0.992
Carubv10026697m.g Capsella rubella Carubv10026697m.g I 0.992
Cla011742 Citrullus lanatus Cla011742 I 0.982
NAC026 Arabidopsis thaliana AT1G62700 I 0.980
Thhalv10023502m.g Eutrema salsugineum Thhalv10023502m.g I 0.980
mgf002365m Mimulus guttatus mgf002365m I 0.979
Si022723m.g Setaria italica Si022723m.g I 0.944
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.940
Si036303m.g Setaria italica Si036303m.g I 0.938
fgenesh1_pg.scaffold_182000024 Physcomitrella patens fgenesh1_pg.scaffold_182000024 I 0.934
gw1.6.394.1 Physcomitrella patens gw1.6.394.1 I 0.925
GRMZM2G052239 Zea mays GRMZM2G052239 I 0.924
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.924
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I 0.923
gw1.1.690.1 Physcomitrella patens gw1.1.690.1 I 0.921
Si022714m.g Setaria italica Si022714m.g I 0.917
mgf004020m Mimulus guttatus mgf004020m I 0.916
MDP0000285555 Malus domestica MDP0000285555 I 0.915
TRIUR3_29250 Triticum urartu TRIUR3_29250 I 0.912
F775_30297 Aegilops tauschii F775_30297 I 0.912
Traes_7DL_BDD45DB24 Triticum aestivum Traes_7DL_BDD45DB24 I 0.912
mgf019285m Mimulus guttatus mgf019285m I 0.910
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.906
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.903
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.902
F775_13961 Aegilops tauschii F775_13961 I 0.901
MTR_2g068920 Medicago truncatula MTR_2g068920 I 0.899
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I 0.898
MTR_2g068880 Medicago truncatula MTR_2g068880 I 0.897
Sb07g005610 Sorghum bicolor Sb07g005610 I 0.897
Pavir.Cb00167 Panicum virgatum Pavir.Cb00167 I 0.896
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.895
LPERR12G01440 Leersia perrieri LPERR12G01440 I 0.895
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.895
Ca_13571 Cicer arietinum Ca_13571 I 0.895
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.895
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.895
Gorai.006G088400 Gossypium raimondii Gorai.006G088400 I 0.894
OMERI04G25730 Oryza meridionalis OMERI04G25730 I 0.894
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.894
Sb08g022560 Sorghum bicolor Sb08g022560 I 0.893
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I 0.893
PK26157.1 Cannabis sativa PK26157.1 I 0.893
POPTR_0003s14950 Populus trichocarpa POPTR_0003s14950 I 0.893
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I 0.892
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I 0.891
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.891
ORGLA05G0143100 Oryza glaberrima ORGLA05G0143100 I 0.890
Cagra.27691s0001 Capsella grandiflora Cagra.27691s0001 I 0.890
OPUNC05G14600 Oryza punctata OPUNC05G14600 I 0.890
ORUFI05G17750 Oryza rufipogon ORUFI05G17750 I 0.890
OS05G0415400 Oryza sativa OS05G0415400 I 0.890
OPUNC04G28220 Oryza punctata OPUNC04G28220 I 0.890
OGLUM05G17550 Oryza glumaepatula OGLUM05G17550 I 0.890
OBART05G16540 Oryza barthii OBART05G16540 I 0.890
BGIOSGA018048 Oryza indica BGIOSGA018048 I 0.890
ONIVA05G17220 Oryza nivara ONIVA05G17220 I 0.890
GLYMA04G13660 Glycine max GLYMA04G13660 I 0.889
LPERR11G01300 Leersia perrieri LPERR11G01300 I 0.889
TCM_035160 Theobroma cacao TCM_035160 I 0.888
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I 0.888
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.888
Gorai.010G171100 Gossypium raimondii Gorai.010G171100 I 0.888
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.888
SapurV1A.0059s0580 Salix purpurea SapurV1A.0059s0580 I 0.888
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.887
GRMZM2G167018 Zea mays GRMZM2G167018 I 0.887
anac032 Vitis vinifera VIT_18s0001g02300 I 0.887
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.887
GLYMA09G36600 Glycine max GLYMA09G36600 I 0.886
mgf015836m Mimulus guttatus mgf015836m I 0.886
SapurV1A.0076s0070 Salix purpurea SapurV1A.0076s0070 I 0.886
Si032702m.g Setaria italica Si032702m.g I 0.886
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.886
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.885
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.885
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.885
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.885
OB09G25590 Oryza brachyantha OB09G25590 I 0.885
Bra034719 Brassica rapa Bra034719 I 0.885
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.885
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.885
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I 0.885
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.885
mgf013201m Mimulus guttatus mgf013201m I 0.884
GSMUA_Achr10G08120_001 Musa acuminata GSMUA_Achr10G08120_001 I 0.884
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.883
GLYMA06G47680 Glycine max GLYMA06G47680 I 0.883
Gorai.010G236700 Gossypium raimondii Gorai.010G236700 I 0.882
MDP0000206868 Malus domestica MDP0000206868 I 0.882
Bostr.3640s0064 Boechera stricta Bostr.3640s0064 I 0.881
Cagra.5641s0055 Capsella grandiflora Cagra.5641s0055 I 0.881
Carubv10014270m.g Capsella rubella Carubv10014270m.g I 0.881
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.880
SELMODRAFT_71305 Selaginella moellendorffii SELMODRAFT_71305 I 0.880
Bo3g065200 Brassica oleracea Bo3g065200 I 0.880
SELMODRAFT_69090 Selaginella moellendorffii SELMODRAFT_69090 I 0.880
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I 0.880
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I 0.880
Thhalv10021225m.g Eutrema salsugineum Thhalv10021225m.g I 0.879
GLYMA05G32850 Glycine max GLYMA05G32850 I 0.879
Carubv10009926m.g Capsella rubella Carubv10009926m.g I 0.879
AT3G12910 Arabidopsis thaliana AT3G12910 D 0.879
Bo1g138800 Brassica oleracea Bo1g138800 I 0.879
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I 0.879
NAC002 Arabidopsis thaliana AT1G01720 D 0.879
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I 0.879
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.879
Bra039353 Brassica rapa Bra039353 I 0.879
fgenesh2_kg.3__1353__AT3G12910.1 Arabidopsis lyrata fgenesh2_kg.3__1353__AT3G12910.1 I 0.879
Bra033239 Brassica rapa Bra033239 I 0.879
Bo5g001100 Brassica oleracea Bo5g001100 I 0.879
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I 0.879
MTR_8g094580 Medicago truncatula MTR_8g094580 I 0.878
GLYMA14G24220 Glycine max GLYMA14G24220 I 0.878
VIT_06s0004g00020 Vitis vinifera VIT_06s0004g00020 I 0.878
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I 0.877
OMERI05G14410 Oryza meridionalis OMERI05G14410 I 0.877
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I 0.877
Sb02g006680 Sorghum bicolor Sb02g006680 I 0.876
GRMZM2G079632 Zea mays GRMZM2G079632 I 0.876
OGLUM04G30580 Oryza glumaepatula OGLUM04G30580 I 0.875
SapurV1A.0367s0210 Salix purpurea SapurV1A.0367s0210 I 0.875
BRADI1G32660 Brachypodium distachyon BRADI1G32660 I 0.875
ORUFI04G32410 Oryza rufipogon ORUFI04G32410 I 0.875
OS04G0691300 Oryza sativa OS04G0691300 I 0.875
GRMZM2G162739 Zea mays GRMZM2G162739 I 0.875
ORGLA04G0270600 Oryza glaberrima ORGLA04G0270600 I 0.875
BGIOSGA014034 Oryza indica BGIOSGA014034 I 0.875
ONIVA04G29890 Oryza nivara ONIVA04G29890 I 0.875
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.875
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.874
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I 0.873
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I 0.872
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I 0.872
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I 0.872
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I 0.872
OS08G0157900 Oryza sativa OS08G0157900 I 0.872
BGIOSGA027623 Oryza indica BGIOSGA027623 I 0.872
ONIVA08G03440 Oryza nivara ONIVA08G03440 I 0.872
MLOC_25708 Hordeum vulgare MLOC_25708 N 0.871