cassava20878.m1 (Manihot esculenta)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01422 (zf-NF-X1) IPR000967 cassava20878.m1 T300921_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava20878.m1 NFX 148 165
cassava20878.m1 NFX 200 218
cassava20878.m1 NFX 253 271
cassava20878.m1 NFX 307 326
cassava20878.m1 NFX 360 378
cassava20878.m1 NFX 381 405
cassava20878.m1 NFX 452 464
cassava20878.m1 NFX 473 484
cassava20878.m1 NFX 555 566
cassava20878.m1 NFX 598 615
cassava20878.m1 NFX 650 681

Links

Other NFX family TFs
Other Manihot esculenta TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_045_00093 Aquilegia coerulea Aquca_045_00093 N 0.843
Cucsa.136670 Cucumis sativus Cucsa.136670 N 0.828
Thhalv10012642m.g Eutrema salsugineum Thhalv10012642m.g N 0.821
Pm018929 Prunus mume Pm018929 N 0.812
PRUPE_ppa001277mg Prunus persica PRUPE_ppa001277mg N 0.812
Cagra.1504s0067 Capsella grandiflora Cagra.1504s0067 N 0.806
Carubv10003051m.g Capsella rubella Carubv10003051m.g N 0.806
NFXL2 Arabidopsis thaliana AT5G05660 N 0.801
mgf001689m Mimulus guttatus mgf001689m N 0.789
ATNFXL2 Vitis vinifera VIT_13s0067g00920 N 0.763
Ca_13412 Cicer arietinum Ca_13412 N 0.758
Traes_3AS_496047B73 Triticum aestivum Traes_3AS_496047B73 N 0.758
Eucgr.J00206 Eucalyptus grandis Eucgr.J00206 N 0.753
Gorai.010G197800 Gossypium raimondii Gorai.010G197800 N 0.753
evm.TU.supercontig_19.173 Carica papaya evm.TU.supercontig_19.173 N 0.747
MLOC_4879 Hordeum vulgare MLOC_4879 N 0.747
TCM_042496 Theobroma cacao TCM_042496 N 0.737
SELMODRAFT_510 Selaginella moellendorffii SELMODRAFT_510 N 0.730
Solyc06g051570.2 Solanum lycopersicum Solyc06g051570.2 N 0.726
POPTR_0010s19600 Populus trichocarpa POPTR_0010s19600 N 0.710
SapurV1A.0061s0270 Salix purpurea SapurV1A.0061s0270 N 0.710
Pavir.J07154 Panicum virgatum Pavir.J07154 N 0.704