Gorai.010G197800 (Gossypium raimondii)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01422 (zf-NF-X1) IPR000967 Gorai.010G197800 T300973_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.010G197800.1 NFX 195 212
Gorai.010G197800.1 NFX 247 265
Gorai.010G197800.1 NFX 300 318
Gorai.010G197800.1 NFX 354 373
Gorai.010G197800.1 NFX 407 425
Gorai.010G197800.1 NFX 434 452
Gorai.010G197800.1 NFX 499 511
Gorai.010G197800.1 NFX 520 531
Gorai.010G197800.1 NFX 602 613
Gorai.010G197800.1 NFX 645 662
Gorai.010G197800.2 NFX 195 212
Gorai.010G197800.2 NFX 247 265
Gorai.010G197800.2 NFX 300 318
Gorai.010G197800.2 NFX 354 373
Gorai.010G197800.2 NFX 407 425
Gorai.010G197800.2 NFX 434 452
Gorai.010G197800.2 NFX 499 511
Gorai.010G197800.2 NFX 520 531
Gorai.010G197800.2 NFX 602 613
Gorai.010G197800.2 NFX 645 662

Links

Other NFX family TFs
Other Gossypium raimondii TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_042496 Theobroma cacao TCM_042496 N 0.952
evm.TU.supercontig_19.173 Carica papaya evm.TU.supercontig_19.173 N 0.856
Eucgr.J00206 Eucalyptus grandis Eucgr.J00206 N 0.844
Solyc06g051570.2 Solanum lycopersicum Solyc06g051570.2 N 0.840
ATNFXL2 Vitis vinifera VIT_13s0067g00920 N 0.838
Ca_13412 Cicer arietinum Ca_13412 N 0.814
GRMZM2G139369 Zea mays GRMZM2G139369 N 0.787
Pavir.J07154 Panicum virgatum Pavir.J07154 N 0.787
Aquca_045_00093 Aquilegia coerulea Aquca_045_00093 N 0.784
POPTR_0010s19600 Populus trichocarpa POPTR_0010s19600 N 0.778
Sb03g005310 Sorghum bicolor Sb03g005310 N 0.769
Bo9g177030 Brassica oleracea Bo9g177030 N 0.760
GLYMA18G03080 Glycine max GLYMA18G03080 N 0.760
Cucsa.136670 Cucumis sativus Cucsa.136670 N 0.757
cassava20878.m1 Manihot esculenta cassava20878.m1 N 0.753
Pm018929 Prunus mume Pm018929 N 0.749
PRUPE_ppa001277mg Prunus persica PRUPE_ppa001277mg N 0.749
mgf001689m Mimulus guttatus mgf001689m N 0.742
Cagra.1504s0067 Capsella grandiflora Cagra.1504s0067 N 0.741
Carubv10003051m.g Capsella rubella Carubv10003051m.g N 0.741
Thhalv10012642m.g Eutrema salsugineum Thhalv10012642m.g N 0.739
NFXL2 Arabidopsis thaliana AT5G05660 N 0.739
Bra009123 Brassica rapa Bra009123 N 0.734
MTR_3g070780 Medicago truncatula MTR_3g070780 N 0.719
GSMUA_Achr2G18970_001 Musa acuminata GSMUA_Achr2G18970_001 N 0.719
SapurV1A.0061s0270 Salix purpurea SapurV1A.0061s0270 N 0.714
Si000223m.g Setaria italica Si000223m.g N 0.705
LjT47B05.50.nd Lotus japonicus LjT47B05.50.nd N 0.701
Traes_3AS_496047B73 Triticum aestivum Traes_3AS_496047B73 N 0.701