SPL15 (Arabidopsis lyrata)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 fgenesh2_kg.5__2235__AT3G57920.1 T322554_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL15
M07263_2.00 		Arabidopsis thaliana
DNWNTGTACGGAHN
NDTCCGTACANWNH		 Dap-seq
OMalley et al.(2016)
SPL15_col_a 		0.986 1.000
SPL15
M07264_2.00 		Arabidopsis thaliana
DNTGTACGGAHNNNN
NNNNDTCCGTACANH		 Dap-seq
OMalley et al.(2016)
SPL15_colamp_a 		0.986 1.000
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.5__2235__AT3G57920.1 SBP 59 133

Links

Other SBP family TFs
Other Arabidopsis lyrata TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPL15 Arabidopsis thaliana AT3G57920 D 0.986
Bostr.20903s0042 Boechera stricta Bostr.20903s0042 I 0.985
Carubv10017540m.g Capsella rubella Carubv10017540m.g I 0.985
Bostr.20903s0043 Boechera stricta Bostr.20903s0043 I 0.985
Cagra.0686s0010 Capsella grandiflora Cagra.0686s0010 I 0.985
Bo4g109710 Brassica oleracea Bo4g109710 I 0.985
Bo6g073290 Brassica oleracea Bo6g073290 I 0.985
Bra003305 Brassica rapa Bra003305 I 0.981
Bra014599 Brassica rapa Bra014599 I 0.972
Thhalv10006058m.g Eutrema salsugineum Thhalv10006058m.g I 0.966
PGSC0003DMG400011433 Solanum tuberosum PGSC0003DMG400011433 I 0.927
Solyc10g078700.1 Solanum lycopersicum Solyc10g078700.1 I 0.927
GSMUA_Achr9G22260_001 Musa acuminata GSMUA_Achr9G22260_001 I 0.919
GSMUA_Achr4G03880_001 Musa acuminata GSMUA_Achr4G03880_001 I 0.918
Thhalv10016816m.g Eutrema salsugineum Thhalv10016816m.g I 0.891