GSMUA_Achr4G03880_001 (Musa acuminata)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GSMUA_Achr4G03880_001 T322650_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL15
M07263_2.00 		Arabidopsis thaliana
DNWNTGTACGGAHN
NDTCCGTACANWNH		 Dap-seq
OMalley et al.(2016)
SPL15_col_a 		0.918 0.747
SPL15
M07264_2.00 		Arabidopsis thaliana
DNTGTACGGAHNNNN
NNNNDTCCGTACANH		 Dap-seq
OMalley et al.(2016)
SPL15_colamp_a 		0.918 0.747
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P03880_001 SBP 66 140

Links

Other SBP family TFs
Other Musa acuminata TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr9G22260_001 Musa acuminata GSMUA_Achr9G22260_001 I 0.975
Solyc10g078700.1 Solanum lycopersicum Solyc10g078700.1 I 0.967
PGSC0003DMG400011433 Solanum tuberosum PGSC0003DMG400011433 I 0.967
Thhalv10006058m.g Eutrema salsugineum Thhalv10006058m.g I 0.935
mgf012995m Mimulus guttatus mgf012995m I 0.932
BRADI3G40030 Brachypodium distachyon BRADI3G40030 I 0.927
GSMUA_Achr7G20510_001 Musa acuminata GSMUA_Achr7G20510_001 I 0.924
Carubv10017540m.g Capsella rubella Carubv10017540m.g I 0.920
Cagra.0686s0010 Capsella grandiflora Cagra.0686s0010 I 0.920
Bostr.20903s0042 Boechera stricta Bostr.20903s0042 I 0.920
LPERR08G16940 Leersia perrieri LPERR08G16940 I 0.920
Bostr.20903s0043 Boechera stricta Bostr.20903s0043 I 0.920
SPL15 Arabidopsis lyrata fgenesh2_kg.5__2235__AT3G57920.1 I 0.918
SPL15 Arabidopsis thaliana AT3G57920 D 0.918
Bo4g109710 Brassica oleracea Bo4g109710 I 0.916
Bo6g073290 Brassica oleracea Bo6g073290 I 0.916
AMTR_s00022p00198330 Amborella trichopoda AMTR_s00022p00198330 I 0.915
VIT_08s0007g06270 Vitis vinifera VIT_08s0007g06270 I 0.913
TCM_024873 Theobroma cacao TCM_024873 I 0.913
29269.m000250 Ricinus communis 29269.m000250 I 0.913
GSMUA_Achr8G25550_001 Musa acuminata GSMUA_Achr8G25550_001 I 0.913
GSMUA_Achr9G27660_001 Musa acuminata GSMUA_Achr9G27660_001 I 0.911
Eucgr.A02441 Eucalyptus grandis Eucgr.A02441 I 0.911
Lus10023818.g Linum usitatissimum Lus10023818.g I 0.909
Lus10021034.g Linum usitatissimum Lus10021034.g I 0.909
PK18312.1 Cannabis sativa PK18312.1 I 0.909
Si013870m.g Setaria italica Si013870m.g I 0.908
Pavir.Fb01946 Panicum virgatum Pavir.Fb01946 I 0.907
Sb07g027740 Sorghum bicolor Sb07g027740 I 0.906
GSMUA_Achr6G22280_001 Musa acuminata GSMUA_Achr6G22280_001 I 0.906
GLYMA19G32800 Glycine max GLYMA19G32800 I 0.905
Cucsa.242790 Cucumis sativus Cucsa.242790 I 0.904
OB08G26920 Oryza brachyantha OB08G26920 I 0.904
SPL14 Oryza sativa OS08G0509600 I 0.902
ONIVA08G22610 Oryza nivara ONIVA08G22610 I 0.902
GLYMA03G29901 Glycine max GLYMA03G29901 I 0.902
OGLUM08G21260 Oryza glumaepatula OGLUM08G21260 I 0.902
ORGLA08G0176500 Oryza glaberrima ORGLA08G0176500 I 0.902
OPUNC08G18140 Oryza punctata OPUNC08G18140 I 0.902
ORUFI08G22440 Oryza rufipogon ORUFI08G22440 I 0.902
Ciclev10011938m.g Citrus clementina Ciclev10011938m.g I 0.901
orange1.1g046416m.g Citrus sinensis orange1.1g046416m.g I 0.901
MTR_1g053715 Medicago truncatula MTR_1g053715 I 0.901
TRIUR3_23872 Triticum urartu TRIUR3_23872 I 0.900
PRUPE_ppa021582mg Prunus persica PRUPE_ppa021582mg I 0.896
MDP0000297978 Malus domestica MDP0000297978 I 0.896
Pm002693 Prunus mume Pm002693 I 0.896
Bra003305 Brassica rapa Bra003305 I 0.896
Gorai.002G156700 Gossypium raimondii Gorai.002G156700 I 0.896
PRUPE_ppa007056mg Prunus persica PRUPE_ppa007056mg I 0.896
Pavir.Ba01711 Panicum virgatum Pavir.Ba01711 I 0.895
BRADI4G33770 Brachypodium distachyon BRADI4G33770 I 0.895
Pavir.J11258 Panicum virgatum Pavir.J11258 I 0.895
OGLUM09G15430 Oryza glumaepatula OGLUM09G15430 I 0.895
ONIVA09G15400 Oryza nivara ONIVA09G15400 I 0.895
OPUNC09G13250 Oryza punctata OPUNC09G13250 I 0.895
Si030195m.g Setaria italica Si030195m.g I 0.895
ORGLA09G0114000 Oryza glaberrima ORGLA09G0114000 I 0.895
OBART09G14800 Oryza barthii OBART09G14800 I 0.895
OMERI09G11520 Oryza meridionalis OMERI09G11520 I 0.895
ORUFI09G15960 Oryza rufipogon ORUFI09G15960 I 0.895
Bra014599 Brassica rapa Bra014599 I 0.894
GSMUA_Achr3G11170_001 Musa acuminata GSMUA_Achr3G11170_001 I 0.893
mgf001295m Mimulus guttatus mgf001295m I 0.890
LPERR09G10900 Leersia perrieri LPERR09G10900 I 0.886
Aquca_009_00161 Aquilegia coerulea Aquca_009_00161 I 0.886
gene22660-v1.0-hybrid Fragaria vesca gene22660-v1.0-hybrid I 0.886