Sb07g027740 (Sorghum bicolor)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 Sb07g027740 T323006_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00
Physcomitrella patens
NNGTACGDH

DHCGTACNN
PBM
Weirauch et al.(2014)
pTH8664
0.928 0.693
PK06791.1
M02482_2.00
Cannabis sativa
NNGTACGRN

NYCGTACNN
PBM
Weirauch et al.(2014)
pTH9583
0.907 0.640
SPL1
M00887_2.00
Arabidopsis thaliana
NGTACGGHN

NDCCGTACN
PBM
Franco-Zorrilla et al.(2014)
SPL1
0.902 0.653
SPL1
M07259_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL1_col_a
0.902 0.653
SPL1
M07260_2.00
Arabidopsis thaliana
NNGTACGKWH

DWMCGTACNN
Dap-seq
OMalley et al.(2016)
SPL1_colamp_a
0.902 0.653
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb07g027740.1 SBP 96 170

Links

Other SBP family TFs
Other Sorghum bicolor TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OGLUM09G15430 Oryza glumaepatula OGLUM09G15430 I 0.982
OPUNC09G13250 Oryza punctata OPUNC09G13250 I 0.982
OBART09G14800 Oryza barthii OBART09G14800 I 0.982
OMERI09G11520 Oryza meridionalis OMERI09G11520 I 0.982
ORGLA09G0114000 Oryza glaberrima ORGLA09G0114000 I 0.982
ORUFI09G15960 Oryza rufipogon ORUFI09G15960 I 0.982
ONIVA09G15400 Oryza nivara ONIVA09G15400 I 0.982
TRIUR3_23872 Triticum urartu TRIUR3_23872 I 0.980
Sb02g028420 Sorghum bicolor Sb02g028420 I 0.979
LPERR09G10900 Leersia perrieri LPERR09G10900 I 0.979
BRADI3G40030 Brachypodium distachyon BRADI3G40030 I 0.976
Si013870m.g Setaria italica Si013870m.g I 0.975
OB08G26920 Oryza brachyantha OB08G26920 I 0.975
GRMZM2G160917 Zea mays GRMZM2G160917 I 0.975
GRMZM2G126018 Zea mays GRMZM2G126018 I 0.974
GRMZM2G307588 Zea mays GRMZM2G307588 I 0.974
Pavir.Fb01946 Panicum virgatum Pavir.Fb01946 I 0.974
F775_10743 Aegilops tauschii F775_10743 I 0.974
ORUFI08G22440 Oryza rufipogon ORUFI08G22440 I 0.972
ONIVA08G22610 Oryza nivara ONIVA08G22610 I 0.972
OPUNC08G18140 Oryza punctata OPUNC08G18140 I 0.972
ORGLA08G0176500 Oryza glaberrima ORGLA08G0176500 I 0.972
GSMUA_Achr9G27660_001 Musa acuminata GSMUA_Achr9G27660_001 I 0.972
SPL14 Oryza sativa OS08G0509600 I 0.972
OGLUM08G21260 Oryza glumaepatula OGLUM08G21260 I 0.972
Si030195m.g Setaria italica Si030195m.g I 0.971
Pavir.J11258 Panicum virgatum Pavir.J11258 I 0.971
Pavir.Ba01711 Panicum virgatum Pavir.Ba01711 I 0.971
GSMUA_Achr8G25550_001 Musa acuminata GSMUA_Achr8G25550_001 I 0.971
GSMUA_Achr6G22280_001 Musa acuminata GSMUA_Achr6G22280_001 I 0.970
BRADI4G33770 Brachypodium distachyon BRADI4G33770 I 0.969
gene22660-v1.0-hybrid Fragaria vesca gene22660-v1.0-hybrid I 0.968
GSMUA_Achr3G11170_001 Musa acuminata GSMUA_Achr3G11170_001 I 0.968
GSMUA_Achr7G20510_001 Musa acuminata GSMUA_Achr7G20510_001 I 0.966
BGIOSGA029541 Oryza indica BGIOSGA029541 I 0.966
OS09G0491532 Oryza sativa OS09G0491532 I 0.966
PK18312.1 Cannabis sativa PK18312.1 I 0.966
MTR_1g053715 Medicago truncatula MTR_1g053715 I 0.966
Cucsa.242790 Cucumis sativus Cucsa.242790 I 0.965
VIT_08s0007g06270 Vitis vinifera VIT_08s0007g06270 I 0.965
Eucgr.A02441 Eucalyptus grandis Eucgr.A02441 I 0.965
OB09G21350 Oryza brachyantha OB09G21350 N 0.965
29269.m000250 Ricinus communis 29269.m000250 I 0.965
TCM_024873 Theobroma cacao TCM_024873 I 0.965
Aquca_009_00161 Aquilegia coerulea Aquca_009_00161 I 0.963
Gorai.002G156700 Gossypium raimondii Gorai.002G156700 I 0.962
GLYMA03G29901 Glycine max GLYMA03G29901 I 0.961
GLYMA19G32800 Glycine max GLYMA19G32800 I 0.961
orange1.1g046416m.g Citrus sinensis orange1.1g046416m.g I 0.960
LPERR08G16940 Leersia perrieri LPERR08G16940 I 0.960
Ciclev10011938m.g Citrus clementina Ciclev10011938m.g I 0.960
Ca_07299 Cicer arietinum Ca_07299 I 0.959
SapurV1A.0018s0470 Salix purpurea SapurV1A.0018s0470 I 0.957
mgf012995m Mimulus guttatus mgf012995m I 0.956
MTR_7g092930 Medicago truncatula MTR_7g092930 I 0.955
Lus10023818.g Linum usitatissimum Lus10023818.g I 0.954
Lus10021034.g Linum usitatissimum Lus10021034.g I 0.954
GSMUA_Achr7G02020_001 Musa acuminata GSMUA_Achr7G02020_001 I 0.953
AMTR_s00022p00198330 Amborella trichopoda AMTR_s00022p00198330 I 0.951
PRUPE_ppa021582mg Prunus persica PRUPE_ppa021582mg I 0.950
MDP0000297978 Malus domestica MDP0000297978 I 0.950
PRUPE_ppa007056mg Prunus persica PRUPE_ppa007056mg I 0.950
Pm002693 Prunus mume Pm002693 I 0.950
GSMUA_Achr9G22260_001 Musa acuminata GSMUA_Achr9G22260_001 I 0.945
PK11310.1 Cannabis sativa PK11310.1 I 0.945
Traes_5BL_96D5EA4EE Triticum aestivum Traes_5BL_96D5EA4EE I 0.944
Eucgr.K01828 Eucalyptus grandis Eucgr.K01828 I 0.943
GLYMA02G30670 Glycine max GLYMA02G30670 I 0.941
Pm007035 Prunus mume Pm007035 I 0.940
Gorai.006G066700 Gossypium raimondii Gorai.006G066700 I 0.940
mgf001295m Mimulus guttatus mgf001295m I 0.940
GLYMA18G36960 Glycine max GLYMA18G36960 I 0.938
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.936
GRMZM2G460544 Zea mays GRMZM2G460544 N 0.935
Lus10012020.g Linum usitatissimum Lus10012020.g I 0.930
Lus10016275.g Linum usitatissimum Lus10016275.g I 0.930
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I 0.928
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D 0.928
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I 0.927
AMTR_s00106p00142470 Amborella trichopoda AMTR_s00106p00142470 I 0.923
GSMUA_Achr2G01820_001 Musa acuminata GSMUA_Achr2G01820_001 I 0.922
OLONG_015903 Oryza longistaminata OLONG_015903 N 0.919
PGSC0003DMG400011433 Solanum tuberosum PGSC0003DMG400011433 I 0.918
Solyc10g078700.1 Solanum lycopersicum Solyc10g078700.1 I 0.918
SPL6 Oryza sativa OS03G0833300 I 0.918
OPUNC03G37170 Oryza punctata OPUNC03G37170 I 0.918
OGLUM03G39810 Oryza glumaepatula OGLUM03G39810 I 0.918
OBART03G39900 Oryza barthii OBART03G39900 I 0.918
OB03G47050 Oryza brachyantha OB03G47050 I 0.918
OMERI03G36740 Oryza meridionalis OMERI03G36740 I 0.918
ORUFI03G41710 Oryza rufipogon ORUFI03G41710 I 0.918
OPUNC03G37130 Oryza punctata OPUNC03G37130 I 0.918
ONIVA03G41820 Oryza nivara ONIVA03G41820 I 0.918
ORGLA03G0367800 Oryza glaberrima ORGLA03G0367800 I 0.918
Pavir.J01500 Panicum virgatum Pavir.J01500 I 0.917
Sb01g002530 Sorghum bicolor Sb01g002530 I 0.917
Si034095m.g Setaria italica Si034095m.g I 0.917
Pavir.Ia00235 Panicum virgatum Pavir.Ia00235 I 0.917
GRMZM2G156756 Zea mays GRMZM2G156756 I 0.917
LPERR03G34030 Leersia perrieri LPERR03G34030 I 0.916
Traes_7DS_E2A582546 Triticum aestivum Traes_7DS_E2A582546 N 0.916
Cagra.16630s0008 Capsella grandiflora Cagra.16630s0008 I 0.915
Thhalv10001295m.g Eutrema salsugineum Thhalv10001295m.g I 0.915
mgf025134m Mimulus guttatus mgf025134m I 0.915
SPL12 Arabidopsis lyrata scaffold_503227.1 I 0.914
GSMUA_Achr3G24520_001 Musa acuminata GSMUA_Achr3G24520_001 I 0.914
SapurV1A.0294s0270 Salix purpurea SapurV1A.0294s0270 I 0.913
Traes_4AL_5062917C4 Triticum aestivum Traes_4AL_5062917C4 I 0.913
Traes_5DL_3CDCC5DFF Triticum aestivum Traes_5DL_3CDCC5DFF I 0.913
POPTR_0002s18970 Populus trichocarpa POPTR_0002s18970 I 0.913
TRIUR3_33729 Triticum urartu TRIUR3_33729 I 0.913
BRADI1G02760 Brachypodium distachyon BRADI1G02760 I 0.913
SPL1 Arabidopsis lyrata fgenesh2_kg.4__2943__AT2G47070.1 I 0.913
SapurV1A.0014s0380 Salix purpurea SapurV1A.0014s0380 I 0.913
F775_31139 Aegilops tauschii F775_31139 I 0.913
MLOC_4830 Hordeum vulgare MLOC_4830 I 0.913
POPTR_0014s10960 Populus trichocarpa POPTR_0014s10960 I 0.913
MDP0000919693 Malus domestica MDP0000919693 I 0.913
Eucgr.H04114 Eucalyptus grandis Eucgr.H04114 I 0.912
GSMUA_Achr5G27280_001 Musa acuminata GSMUA_Achr5G27280_001 I 0.911
Aquca_029_00063 Aquilegia coerulea Aquca_029_00063 I 0.911
Traes_5BL_3503725F1 Triticum aestivum Traes_5BL_3503725F1 I 0.911
VIT_18s0122g00380 Vitis vinifera VIT_18s0122g00380 I 0.909
Pm017778 Prunus mume Pm017778 I 0.909
PRUPE_ppa024285mg Prunus persica PRUPE_ppa024285mg I 0.909
GLYMA10G01211 Glycine max GLYMA10G01211 I 0.908
GLYMA02G01160 Glycine max GLYMA02G01160 I 0.908
Bostr.25993s0059 Boechera stricta Bostr.25993s0059 I 0.908
Bostr.29344s0010 Boechera stricta Bostr.29344s0010 I 0.908
Bra041037 Brassica rapa Bra041037 I 0.908
MTR_7g444860 Medicago truncatula MTR_7g444860 I 0.908
Cagra.3527s0045 Capsella grandiflora Cagra.3527s0045 I 0.908
Bo4g005730 Brassica oleracea Bo4g005730 I 0.908
cassava36085.valid.m1 Manihot esculenta cassava36085.valid.m1 I 0.907
PK06791.1 Cannabis sativa PK06791.1 D 0.907
30076.m004574 Ricinus communis 30076.m004574 I 0.907
Ciclev10018697m.g Citrus clementina Ciclev10018697m.g I 0.907
Gorai.008G135700 Gossypium raimondii Gorai.008G135700 I 0.907
Lus10004523.g Linum usitatissimum Lus10004523.g I 0.907
Lus10010071.g Linum usitatissimum Lus10010071.g I 0.907
PGSC0003DMG400005196 Solanum tuberosum PGSC0003DMG400005196 I 0.907
orange1.1g001971m.g Citrus sinensis orange1.1g001971m.g I 0.907
OB04G27960 Oryza brachyantha OB04G27960 I 0.907
GLYMA15G21860 Glycine max GLYMA15G21860 I 0.907
VIT_07s0005g02260 Vitis vinifera VIT_07s0005g02260 I 0.907
Eucgr.A01019 Eucalyptus grandis Eucgr.A01019 I 0.907
Solyc01g068100.2 Solanum lycopersicum Solyc01g068100.2 I 0.907
Ca_03548 Cicer arietinum Ca_03548 I 0.907
SELMODRAFT_445524 Selaginella moellendorffii SELMODRAFT_445524 I 0.906
GSMUA_Achr5G22250_001 Musa acuminata GSMUA_Achr5G22250_001 I 0.906
OB08G27190 Oryza brachyantha OB08G27190 I 0.906
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I 0.906
GSMUA_Achr4G03880_001 Musa acuminata GSMUA_Achr4G03880_001 I 0.906
29889.m003388 Ricinus communis 29889.m003388 I 0.906
TCM_004922 Theobroma cacao TCM_004922 I 0.906
SELMODRAFT_437670 Selaginella moellendorffii SELMODRAFT_437670 I 0.906
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I 0.906
evm.TU.supercontig_146.32 Carica papaya evm.TU.supercontig_146.32 I 0.905
MDP0000180408 Malus domestica MDP0000180408 I 0.905
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I 0.905
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I 0.905
PRUPE_ppa000792mg Prunus persica PRUPE_ppa000792mg I 0.905
ONIVA04G19190 Oryza nivara ONIVA04G19190 I 0.905
OPUNC04G18620 Oryza punctata OPUNC04G18620 I 0.905
VIT_05s0020g00700 Vitis vinifera VIT_05s0020g00700 I 0.905
OBART04G20940 Oryza barthii OBART04G20940 I 0.905
MTR_1g086250 Medicago truncatula MTR_1g086250 I 0.905
GLYMA09G09790 Glycine max GLYMA09G09790 I 0.905
BGIOSGA016888 Oryza indica BGIOSGA016888 I 0.905
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I 0.905
Ciclev10004227m.g Citrus clementina Ciclev10004227m.g I 0.905
OMERI04G17360 Oryza meridionalis OMERI04G17360 I 0.905
MDP0000919694 Malus domestica MDP0000919694 I 0.905
SPL7 Oryza sativa OS04G0551500 I 0.905
TCM_021482 Theobroma cacao TCM_021482 I 0.905
POPTR_0001s40870 Populus trichocarpa POPTR_0001s40870 I 0.904
gene22889-v1.0-hybrid Fragaria vesca gene22889-v1.0-hybrid I 0.904
mgf009459m Mimulus guttatus mgf009459m I 0.904
POPTR_0011s11770 Populus trichocarpa POPTR_0011s11770 I 0.903
SapurV1A.0156s0200 Salix purpurea SapurV1A.0156s0200 I 0.903
SapurV1A.1264s0060 Salix purpurea SapurV1A.1264s0060 I 0.902
chr5.CM0158.110.nc Lotus japonicus chr5.CM0158.110.nc I 0.902
SPL1 Arabidopsis thaliana AT2G47070 D 0.902
Gorai.007G087900 Gossypium raimondii Gorai.007G087900 I 0.901
GLYMA11G16556 Glycine max GLYMA11G16556 I 0.901
VIT_15s0021g02290 Vitis vinifera VIT_15s0021g02290 I 0.901
Ca_10879 Cicer arietinum Ca_10879 I 0.901
TCM_005620 Theobroma cacao TCM_005620 I 0.901
evm.TU.supercontig_149.2 Carica papaya evm.TU.supercontig_149.2 I 0.901
MDP0000262141 Malus domestica MDP0000262141 I 0.900
Gorai.013G169800 Gossypium raimondii Gorai.013G169800 I 0.900
TCM_031595 Theobroma cacao TCM_031595 I 0.900
28211.m000132 Ricinus communis 28211.m000132 I 0.898
Ca_24655 Cicer arietinum Ca_24655 I 0.897
POPTR_0014s05690 Populus trichocarpa POPTR_0014s05690 I 0.897
Carubv10016658m.g Capsella rubella Carubv10016658m.g I 0.897
SapurV1A.0033s0320 Salix purpurea SapurV1A.0033s0320 I 0.897
30174.m008805 Ricinus communis 30174.m008805 I 0.897
GLYMA01G15134 Glycine max GLYMA01G15134 I 0.896
OLONG_020138 Oryza longistaminata OLONG_020138 N 0.896
OBART08G20010 Oryza barthii OBART08G20010 N 0.896
POPTR_0002s14330 Populus trichocarpa POPTR_0002s14330 I 0.896
AMTR_s00045p00076020 Amborella trichopoda AMTR_s00045p00076020 I 0.895
cassava37839.valid.m1 Manihot esculenta cassava37839.valid.m1 I 0.894
MDP0000589558 Malus domestica MDP0000589558 I 0.894
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I 0.892
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I 0.892
Gorai.007G362000 Gossypium raimondii Gorai.007G362000 I 0.891
MDP0000156994 Malus domestica MDP0000156994 I 0.890
MDP0000180409 Malus domestica MDP0000180409 I 0.890
MDP0000861601 Malus domestica MDP0000861601 I 0.890
Cla021411 Citrullus lanatus Cla021411 I 0.886
evm.TU.supercontig_80.88 Carica papaya evm.TU.supercontig_80.88 I 0.885