CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA02G30670
(
Glycine max
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03110 (SBP)
IPR004333
GLYMA02G30670
T322561_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SPL13A
M07265_2.00
Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH
Dap-seq
OMalley et al.(2016)
SPL13_col_a
0.915
0.680
estExt_fgenesh1_pg.C_1940033
M02479_2.00
Physcomitrella patens
NNGTACGDH
DHCGTACNN
PBM
Weirauch et al.(2014)
pTH8664
0.911
0.773
SPL1
M00887_2.00
Arabidopsis thaliana
NGTACGGHN
NDCCGTACN
PBM
Franco-Zorrilla et al.(2014)
SPL1
0.906
0.707
SPL1
M07259_2.00
Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL1_col_a
0.906
0.707
SPL1
M07260_2.00
Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN
Dap-seq
OMalley et al.(2016)
SPL1_colamp_a
0.906
0.707
For this family, TFs with SR scores >
0.885
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA02G30670.2
SBP
75
149
CQVAGCKVDLSGAKAYYSRHKVCAMHSKSPTVTVAGLEQRFCQQCSRFHLLSEFDQGKRSCRKRLAGHNERRRKP
Links
Other
SBP
family TFs
Other
Glycine max
TFs
235 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10011938m.g
Citrus clementina
Ciclev10011938m.g
I
0.974
orange1.1g046416m.g
Citrus sinensis
orange1.1g046416m.g
I
0.974
MTR_7g092930
Medicago truncatula
MTR_7g092930
I
0.970
Ca_07299
Cicer arietinum
Ca_07299
I
0.970
PK18312.1
Cannabis sativa
PK18312.1
I
0.968
MTR_1g053715
Medicago truncatula
MTR_1g053715
I
0.968
29269.m000250
Ricinus communis
29269.m000250
I
0.966
VIT_08s0007g06270
Vitis vinifera
VIT_08s0007g06270
I
0.966
TCM_024873
Theobroma cacao
TCM_024873
I
0.966
Eucgr.A02441
Eucalyptus grandis
Eucgr.A02441
I
0.965
Cucsa.242790
Cucumis sativus
Cucsa.242790
I
0.965
GLYMA19G32800
Glycine max
GLYMA19G32800
I
0.963
Gorai.002G156700
Gossypium raimondii
Gorai.002G156700
I
0.960
GLYMA03G29901
Glycine max
GLYMA03G29901
I
0.960
GRMZM2G160917
Zea mays
GRMZM2G160917
I
0.960
gene22660-v1.0-hybrid
Fragaria vesca
gene22660-v1.0-hybrid
I
0.959
SapurV1A.0018s0470
Salix purpurea
SapurV1A.0018s0470
I
0.958
Aquca_009_00161
Aquilegia coerulea
Aquca_009_00161
I
0.956
BRADI3G40030
Brachypodium distachyon
BRADI3G40030
I
0.956
GSMUA_Achr7G20510_001
Musa acuminata
GSMUA_Achr7G20510_001
I
0.953
F775_10743
Aegilops tauschii
F775_10743
I
0.950
GSMUA_Achr7G02020_001
Musa acuminata
GSMUA_Achr7G02020_001
I
0.949
GSMUA_Achr6G22280_001
Musa acuminata
GSMUA_Achr6G22280_001
I
0.949
GSMUA_Achr8G25550_001
Musa acuminata
GSMUA_Achr8G25550_001
I
0.947
GSMUA_Achr9G27660_001
Musa acuminata
GSMUA_Achr9G27660_001
I
0.946
OPUNC09G13250
Oryza punctata
OPUNC09G13250
I
0.944
LPERR09G10900
Leersia perrieri
LPERR09G10900
I
0.944
ONIVA09G15400
Oryza nivara
ONIVA09G15400
I
0.944
OMERI09G11520
Oryza meridionalis
OMERI09G11520
I
0.944
OBART09G14800
Oryza barthii
OBART09G14800
I
0.944
OGLUM09G15430
Oryza glumaepatula
OGLUM09G15430
I
0.944
Si013870m.g
Setaria italica
Si013870m.g
I
0.944
ORGLA09G0114000
Oryza glaberrima
ORGLA09G0114000
I
0.944
BRADI4G33770
Brachypodium distachyon
BRADI4G33770
I
0.944
TRIUR3_23872
Triticum urartu
TRIUR3_23872
I
0.944
Gorai.006G066700
Gossypium raimondii
Gorai.006G066700
I
0.944
Pavir.Ba01711
Panicum virgatum
Pavir.Ba01711
I
0.944
Si030195m.g
Setaria italica
Si030195m.g
I
0.944
Pavir.J11258
Panicum virgatum
Pavir.J11258
I
0.944
ORUFI09G15960
Oryza rufipogon
ORUFI09G15960
I
0.944
MDP0000297978
Malus domestica
MDP0000297978
I
0.943
mgf001295m
Mimulus guttatus
mgf001295m
I
0.943
Pm002693
Prunus mume
Pm002693
I
0.943
Pavir.Fb01946
Panicum virgatum
Pavir.Fb01946
I
0.943
PRUPE_ppa021582mg
Prunus persica
PRUPE_ppa021582mg
I
0.943
PRUPE_ppa007056mg
Prunus persica
PRUPE_ppa007056mg
I
0.943
Sb07g027740
Sorghum bicolor
Sb07g027740
I
0.941
GSMUA_Achr3G11170_001
Musa acuminata
GSMUA_Achr3G11170_001
I
0.940
OB08G26920
Oryza brachyantha
OB08G26920
I
0.939
Pm007035
Prunus mume
Pm007035
I
0.938
Sb02g028420
Sorghum bicolor
Sb02g028420
I
0.938
ONIVA08G22610
Oryza nivara
ONIVA08G22610
I
0.937
ORGLA08G0176500
Oryza glaberrima
ORGLA08G0176500
I
0.937
SPL14
Oryza sativa
OS08G0509600
I
0.937
OPUNC08G18140
Oryza punctata
OPUNC08G18140
I
0.937
ORUFI08G22440
Oryza rufipogon
ORUFI08G22440
I
0.937
OGLUM08G21260
Oryza glumaepatula
OGLUM08G21260
I
0.937
VIT_01s0010g03910
Vitis vinifera
VIT_01s0010g03910
I
0.936
cassava17811.valid.m1
Manihot esculenta
cassava17811.valid.m1
I
0.935
GRMZM2G307588
Zea mays
GRMZM2G307588
I
0.932
GRMZM2G126018
Zea mays
GRMZM2G126018
I
0.932
Lus10023818.g
Linum usitatissimum
Lus10023818.g
I
0.932
Lus10021034.g
Linum usitatissimum
Lus10021034.g
I
0.932
Ciclev10032171m.g
Citrus clementina
Ciclev10032171m.g
I
0.932
OS09G0491532
Oryza sativa
OS09G0491532
I
0.931
BGIOSGA029541
Oryza indica
BGIOSGA029541
I
0.931
GLYMA18G36960
Glycine max
GLYMA18G36960
I
0.929
mgf012995m
Mimulus guttatus
mgf012995m
I
0.929
Ca_05711
Cicer arietinum
Ca_05711
I
0.926
AMTR_s00022p00198330
Amborella trichopoda
AMTR_s00022p00198330
I
0.926
SapurV1A.1018s0120
Salix purpurea
SapurV1A.1018s0120
I
0.926
Aquca_011_00114
Aquilegia coerulea
Aquca_011_00114
I
0.926
MTR_8g096780
Medicago truncatula
MTR_8g096780
I
0.926
Gorai.008G166000
Gossypium raimondii
Gorai.008G166000
I
0.925
orange1.1g021420m.g
Citrus sinensis
orange1.1g021420m.g
I
0.925
PK02140.1
Cannabis sativa
PK02140.1
I
0.925
TCM_008671
Theobroma cacao
TCM_008671
I
0.925
gene06295-v1.0-hybrid
Fragaria vesca
gene06295-v1.0-hybrid
I
0.924
POPTR_0015s11100
Populus trichocarpa
POPTR_0015s11100
I
0.923
Cla002666
Citrullus lanatus
Cla002666
I
0.922
PRUPE_ppa006611mg
Prunus persica
PRUPE_ppa006611mg
I
0.922
Cucsa.392170
Cucumis sativus
Cucsa.392170
I
0.922
POPTR_0012s10260
Populus trichocarpa
POPTR_0012s10260
I
0.922
SapurV1A.0173s0270
Salix purpurea
SapurV1A.0173s0270
I
0.922
Pm024528
Prunus mume
Pm024528
I
0.922
GSMUA_Achr11G19580_001
Musa acuminata
GSMUA_Achr11G19580_001
I
0.921
GSMUA_AchrUn_randomG21900_001
Musa acuminata
GSMUA_AchrUn_randomG21900_001
I
0.921
gene22888-v1.0-hybrid
Fragaria vesca
gene22888-v1.0-hybrid
I
0.920
Cucsa.157230
Cucumis sativus
Cucsa.157230
I
0.919
VIT_17s0000g01260
Vitis vinifera
VIT_17s0000g01260
I
0.918
Eucgr.K02708
Eucalyptus grandis
Eucgr.K02708
I
0.918
Solyc10g078700.1
Solanum lycopersicum
Solyc10g078700.1
I
0.917
POPTR_0003s16780
Populus trichocarpa
POPTR_0003s16780
I
0.917
PGSC0003DMG400011433
Solanum tuberosum
PGSC0003DMG400011433
I
0.917
SapurV1A.0168s0440
Salix purpurea
SapurV1A.0168s0440
I
0.917
GSMUA_Achr6G27520_001
Musa acuminata
GSMUA_Achr6G27520_001
I
0.916
Bo9g097630
Brassica oleracea
Bo9g097630
I
0.916
Thhalv10013892m.g
Eutrema salsugineum
Thhalv10013892m.g
I
0.916
Ca_01426
Cicer arietinum
Ca_01426
I
0.916
GLYMA04G37391
Glycine max
GLYMA04G37391
I
0.916
scaffold_801495.1
Arabidopsis lyrata
scaffold_801495.1
I
0.916
MTR_3g099080
Medicago truncatula
MTR_3g099080
I
0.916
GLYMA06G17700
Glycine max
GLYMA06G17700
I
0.916
PK11310.1
Cannabis sativa
PK11310.1
I
0.916
SPL13A
Arabidopsis thaliana
AT5G50570
I
0.915
Bo3g024180
Brassica oleracea
Bo3g024180
I
0.915
Bostr.15774s0206
Boechera stricta
Bostr.15774s0206
I
0.915
SPL13A
Arabidopsis thaliana
AT5G50670
D
0.915
GSMUA_Achr6G06030_001
Musa acuminata
GSMUA_Achr6G06030_001
I
0.915
Lus10012020.g
Linum usitatissimum
Lus10012020.g
I
0.915
Carubv10026628m.g
Capsella rubella
Carubv10026628m.g
I
0.915
Cagra.0117s0007
Capsella grandiflora
Cagra.0117s0007
I
0.915
Lus10016275.g
Linum usitatissimum
Lus10016275.g
I
0.915
Bra022766
Brassica rapa
Bra022766
I
0.913
Pm017778
Prunus mume
Pm017778
I
0.913
AMTR_s00013p00150040
Amborella trichopoda
AMTR_s00013p00150040
I
0.913
GLYMA08G01450
Glycine max
GLYMA08G01450
I
0.913
PRUPE_ppa024285mg
Prunus persica
PRUPE_ppa024285mg
I
0.913
Gorai.005G164600
Gossypium raimondii
Gorai.005G164600
I
0.912
GSMUA_Achr9G29330_001
Musa acuminata
GSMUA_Achr9G29330_001
I
0.912
Cla001541
Citrullus lanatus
Cla001541
I
0.911
LPERR08G16940
Leersia perrieri
LPERR08G16940
I
0.911
estExt_fgenesh1_pg.C_1940033
Physcomitrella patens
estExt_fgenesh1_pg.C_1940033
D
0.911
Cucsa.349620
Cucumis sativus
Cucsa.349620
I
0.911
Eucgr.K01828
Eucalyptus grandis
Eucgr.K01828
I
0.911
fgenesh1_pg.scaffold_50000083
Physcomitrella patens
fgenesh1_pg.scaffold_50000083
I
0.911
MDP0000262141
Malus domestica
MDP0000262141
I
0.910
GSMUA_Achr9G22260_001
Musa acuminata
GSMUA_Achr9G22260_001
I
0.909
PRUPE_ppa023657mg
Prunus persica
PRUPE_ppa023657mg
I
0.909
PK19500.1
Cannabis sativa
PK19500.1
I
0.908
SPL1
Arabidopsis thaliana
AT2G47070
D
0.906
cassava6548.valid.m1
Manihot esculenta
cassava6548.valid.m1
I
0.906
29929.m004627
Ricinus communis
29929.m004627
I
0.906
GSMUA_AchrUn_randomG08380_001
Musa acuminata
GSMUA_AchrUn_randomG08380_001
I
0.906
POPTR_0001s13630
Populus trichocarpa
POPTR_0001s13630
I
0.905
GSMUA_Achr2G06150_001
Musa acuminata
GSMUA_Achr2G06150_001
I
0.905
SapurV1A.1460s0110
Salix purpurea
SapurV1A.1460s0110
I
0.905
Cla019579
Citrullus lanatus
Cla019579
I
0.905
Lus10015764.g
Linum usitatissimum
Lus10015764.g
I
0.904
AMTR_s00047p00197010
Amborella trichopoda
AMTR_s00047p00197010
I
0.904
GRMZM2G371033
Zea mays
GRMZM2G371033
I
0.904
PK17790.1
Cannabis sativa
PK17790.1
I
0.904
Gorai.002G181700
Gossypium raimondii
Gorai.002G181700
I
0.904
LPERR01G36700
Leersia perrieri
LPERR01G36700
I
0.903
OGLUM01G46420
Oryza glumaepatula
OGLUM01G46420
I
0.903
ORGLA01G0361700
Oryza glaberrima
ORGLA01G0361700
I
0.903
ORUFI01G45560
Oryza rufipogon
ORUFI01G45560
I
0.903
Sb03g044160
Sorghum bicolor
Sb03g044160
I
0.903
BGIOSGA005075
Oryza indica
BGIOSGA005075
I
0.903
OPUNC01G41070
Oryza punctata
OPUNC01G41070
I
0.903
OMERI01G39190
Oryza meridionalis
OMERI01G39190
I
0.903
ONIVA01G48230
Oryza nivara
ONIVA01G48230
I
0.903
VIT_18s0122g00380
Vitis vinifera
VIT_18s0122g00380
I
0.902
GLYMA05G38180
Glycine max
GLYMA05G38180
I
0.902
evm.TU.supercontig_1141.2
Carica papaya
evm.TU.supercontig_1141.2
I
0.901
Traes_5BL_96D5EA4EE
Triticum aestivum
Traes_5BL_96D5EA4EE
I
0.901
TCM_014668
Theobroma cacao
TCM_014668
I
0.901
evm.TU.supercontig_2783.1
Carica papaya
evm.TU.supercontig_2783.1
I
0.900
estExt_fgenesh1_pg.C_1940032
Physcomitrella patens
estExt_fgenesh1_pg.C_1940032
I
0.900
Gorai.001G057700
Gossypium raimondii
Gorai.001G057700
I
0.899
VIT_01s0011g00130
Vitis vinifera
VIT_01s0011g00130
I
0.899
orange1.1g016971m.g
Citrus sinensis
orange1.1g016971m.g
I
0.899
Ciclev10031834m.g
Citrus clementina
Ciclev10031834m.g
I
0.899
Bra039656
Brassica rapa
Bra039656
I
0.898
Solyc05g015840.2
Solanum lycopersicum
Solyc05g015840.2
I
0.898
PGSC0003DMG400021902
Solanum tuberosum
PGSC0003DMG400021902
I
0.898
Bo6g031220
Brassica oleracea
Bo6g031220
I
0.898
GSMUA_Achr7G22940_001
Musa acuminata
GSMUA_Achr7G22940_001
I
0.898
Aquca_029_00063
Aquilegia coerulea
Aquca_029_00063
I
0.898
Aquca_002_00889
Aquilegia coerulea
Aquca_002_00889
I
0.897
MDP0000919694
Malus domestica
MDP0000919694
I
0.897
cassava42933.valid.m1
Manihot esculenta
cassava42933.valid.m1
I
0.897
OB09G21350
Oryza brachyantha
OB09G21350
N
0.896
cassava43385.valid.m1
Manihot esculenta
cassava43385.valid.m1
I
0.896
Gorai.013G095700
Gossypium raimondii
Gorai.013G095700
I
0.896
TCM_014330
Theobroma cacao
TCM_014330
I
0.896
30138.m003942
Ricinus communis
30138.m003942
I
0.896
VIT_17s0000g05020
Vitis vinifera
VIT_17s0000g05020
I
0.895
MTR_4g109770
Medicago truncatula
MTR_4g109770
I
0.895
GRMZM2G460544
Zea mays
GRMZM2G460544
N
0.895
Cucsa.198630
Cucumis sativus
Cucsa.198630
I
0.895
GLYMA17G08840
Glycine max
GLYMA17G08840
I
0.895
Cucsa.113410
Cucumis sativus
Cucsa.113410
I
0.895
SapurV1A.0072s0340
Salix purpurea
SapurV1A.0072s0340
I
0.895
POPTR_0010s16400
Populus trichocarpa
POPTR_0010s16400
I
0.895
GLYMA04G32002
Glycine max
GLYMA04G32002
I
0.895
Lus10021141.g
Linum usitatissimum
Lus10021141.g
I
0.895
Cla018827
Citrullus lanatus
Cla018827
I
0.895
Cla019331
Citrullus lanatus
Cla019331
I
0.895
MTR_2g461920
Medicago truncatula
MTR_2g461920
I
0.895
Ca_19449
Cicer arietinum
Ca_19449
I
0.895
GLYMA0005S50
Glycine max
GLYMA0005S50
I
0.895
Eucgr.H04114
Eucalyptus grandis
Eucgr.H04114
I
0.895
MDP0000778465
Malus domestica
MDP0000778465
I
0.894
MDP0000146640
Malus domestica
MDP0000146640
I
0.894
30174.m009082
Ricinus communis
30174.m009082
I
0.894
AMTR_s00106p00142470
Amborella trichopoda
AMTR_s00106p00142470
I
0.894
Sb05g017510
Sorghum bicolor
Sb05g017510
I
0.894
cassava7440.valid.m1
Manihot esculenta
cassava7440.valid.m1
I
0.893
cassava39122.m1
Manihot esculenta
cassava39122.m1
I
0.893
SELMODRAFT_437670
Selaginella moellendorffii
SELMODRAFT_437670
I
0.893
MDP0000919693
Malus domestica
MDP0000919693
I
0.893
SELMODRAFT_445524
Selaginella moellendorffii
SELMODRAFT_445524
I
0.893
Bo3g042890
Brassica oleracea
Bo3g042890
I
0.892
GSMUA_Achr2G01820_001
Musa acuminata
GSMUA_Achr2G01820_001
I
0.892
evm.TU.supercontig_146.32
Carica papaya
evm.TU.supercontig_146.32
I
0.892
PRUPE_ppa000792mg
Prunus persica
PRUPE_ppa000792mg
I
0.892
MDP0000180408
Malus domestica
MDP0000180408
I
0.892
Solyc03g114850.2
Solanum lycopersicum
Solyc03g114850.2
I
0.891
PGSC0003DMG400028308
Solanum tuberosum
PGSC0003DMG400028308
I
0.891
Solyc05g012040.2
Solanum lycopersicum
Solyc05g012040.2
I
0.891
POPTR_0015s07140
Populus trichocarpa
POPTR_0015s07140
I
0.891
PGSC0003DMG400024527
Solanum tuberosum
PGSC0003DMG400024527
I
0.891
PRUPE_ppa000690mg
Prunus persica
PRUPE_ppa000690mg
I
0.889
LPERR04G17030
Leersia perrieri
LPERR04G17030
I
0.889
Pm008474
Prunus mume
Pm008474
I
0.889
Lus10007984.g
Linum usitatissimum
Lus10007984.g
I
0.889
gene22889-v1.0-hybrid
Fragaria vesca
gene22889-v1.0-hybrid
I
0.889
Pm008475
Prunus mume
Pm008475
I
0.889
MDP0000180409
Malus domestica
MDP0000180409
I
0.889
SapurV1A.0294s0270
Salix purpurea
SapurV1A.0294s0270
I
0.888
OB08G27190
Oryza brachyantha
OB08G27190
I
0.888
GSMUA_Achr5G22250_001
Musa acuminata
GSMUA_Achr5G22250_001
I
0.888
POPTR_0002s18970
Populus trichocarpa
POPTR_0002s18970
I
0.888
SapurV1A.0014s0380
Salix purpurea
SapurV1A.0014s0380
I
0.888
POPTR_0014s10960
Populus trichocarpa
POPTR_0014s10960
I
0.888
Ciclev10004227m.g
Citrus clementina
Ciclev10004227m.g
I
0.887
GLYMA09G09790
Glycine max
GLYMA09G09790
I
0.887
VIT_05s0020g00700
Vitis vinifera
VIT_05s0020g00700
I
0.887
TCM_021482
Theobroma cacao
TCM_021482
I
0.887
SPL12
Arabidopsis lyrata
scaffold_503227.1
I
0.887
POPTR_0008s09750
Populus trichocarpa
POPTR_0008s09750
I
0.887
OS01G0922600
Oryza sativa
OS01G0922600
I
0.887
AMTR_s00045p00076020
Amborella trichopoda
AMTR_s00045p00076020
I
0.886
GRMZM2G156756
Zea mays
GRMZM2G156756
I
0.886