Hmgb1 (Rattus norvegicus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSRNOG00000029813 T329050_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000049627 Sox 131 204

Links

Other Sox family TFs
Other Rattus norvegicus TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000003986 Anas platyrhynchos ENSAPLG00000003986 N 0.700
hmgb2a Danio rerio ENSDARG00000029722 N 0.605
Myotis_brandtii_DAP3_10031965 Myotis brandtii Myotis_brandtii_DAP3_10031965 N 0.579
ENSOGAG00000011763 Otolemur garnettii ENSOGAG00000011763 N 0.562
ENSOANG00000000353 Ornithorhynchus anatinus ENSOANG00000000353 N 0.557
ENSTBEG00000006802 Tupaia belangeri ENSTBEG00000006802 N 0.545
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N 0.537
ENSMPUG00000004579 Mustela putorius furo ENSMPUG00000004579 N 0.492
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N 0.482
ENSTNIG00000002151 Tetraodon nigroviridis ENSTNIG00000002151 N 0.482
TTHERM_00216040 Tetrahymena thermophila TTHERM_00216040 N 0.464
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I 0.454
LCUP006200 Lucilia cuprina LCUP006200 N 0.454
nRc.2.0.1.g42996 Romanomermis culicivorax nRc.2.0.1.g42996 N 0.449
nLs.2.1.2.g04689 Litomosoides sigmodontis nLs.2.1.2.g04689 N 0.449
ACYPI005775 Acyrthosiphon pisum ACYPI005775 I 0.449
nAv.1.0.1.g02116 Acanthocheilonema viteae nAv.1.0.1.g02116 N 0.449
EEL_0000223401 Elaeophora elaphi EEL_0000223401 N 0.447
SMU15029818 Schmidtea mediterranea SMU15029818 I 0.447
AARA010616 Anopheles arabiensis AARA010616 I 0.445
AALB006415 Anopheles albimanus AALB006415 I 0.445
HHAL000823-PA Halyomorpha halys HHAL000823-PA I 0.445
TMUE_s0009009400 Trichuris muris TMUE_s0009009400 N 0.445
TTRE_0000401801 Trichuris trichiura TTRE_0000401801 I 0.445
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I 0.445
AATE016215 Anopheles atroparvus AATE016215 I 0.445
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N 0.445
CLEC001918 Cimex lectularius CLEC001918 I 0.445
AMEM006878 Anopheles merus AMEM006878 I 0.445
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N 0.445
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N 0.445
D918_09264 Trichuris suis D918_09264 N 0.445
TTRE_0000108401 Trichuris trichiura TTRE_0000108401 N 0.445
GPUH_0000021901 Gongylonema pulchrum GPUH_0000021901 N 0.445
TMUE_s0011001600 Trichuris muris TMUE_s0011001600 I 0.445
ASTEI07799 Anopheles stephensi ASTEI07799 I 0.445
AFAF011136 Anopheles farauti AFAF011136 I 0.445
AMEC012857 Anopheles melas AMEC012857 I 0.445
nDi.2.2.2.g11099 Dirofilaria immitis nDi.2.2.2.g11099 N 0.445
ASIS016667 Anopheles sinensis ASIS016667 I 0.445
ACUA004409 Anopheles culicifacies ACUA004409 I 0.445
TC012723 Tribolium castaneum TC012723 I 0.445
ADAC003252 Anopheles darlingi ADAC003252 I 0.445
GB43084 Apis mellifera GB43084 I 0.445
HMEL005034 Heliconius melpomene HMEL005034 I 0.445
ISCW015985 Ixodes scapularis ISCW015985 N 0.445
BGIBMGA006848 Bombyx mori BGIBMGA006848 I 0.445
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I 0.445
tox4a Gasterosteus aculeatus ENSGACG00000014107 I 0.445
Bm4188 Brugia malayi Bm4188 N 0.445
CGI_10017717 Crassostrea gigas CGI_10017717 I 0.445
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I 0.445
AGAP000281 Anopheles gambiae AGAP000281 I 0.445
KGM_14572 Danaus plexippus KGM_14572 I 0.445
ISCW018867 Ixodes scapularis ISCW018867 I 0.445
WBGene00236865 Onchocerca volvulus WBGene00236865 N 0.445
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.445
WUBG_03914 Wuchereria bancrofti WUBG_03914 N 0.445
RPRC000650 Rhodnius prolixus RPRC000650 I 0.445
LOAG_18151 Loa loa LOAG_18151 N 0.445
LotgiG109021 Lottia gigantea LotgiG109021 I 0.445
MCINX005468 Melitaea cinxia MCINX005468 I 0.445
NV10488 Nasonia vitripennis NV10488 I 0.445
ENSMMUG00000014077 Macaca mulatta ENSMMUG00000014077 N 0.444
Aqu1.209664 Amphimedon queenslandica Aqu1.209664 N 0.443
mgf006762m Mimulus guttatus mgf006762m N 0.442
TCM_014800 Theobroma cacao TCM_014800 N 0.430
Smp_063790 Schistosoma mansoni Smp_063790 N 0.429
MDOA008605 Musca domestica MDOA008605 N 0.427
HelroG91764 Helobdella robusta HelroG91764 N 0.426
ACEP19638 Atta cephalotes ACEP19638 I 0.419
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.417
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.417
EDI_340970 Entamoeba dispar EDI_340970 N 0.416
RO3G_05222 Rhizopus oryzae RO3G_05222 N 0.415