Ocbimv22012197m.g (Octopus bimaculoides)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Ocbimv22012197m.g T334313_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.458 0.391
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22012197m.p Sox 229 297

Links

Other Sox family TFs
Other Octopus bimaculoides TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I 0.726
HMEL005034 Heliconius melpomene HMEL005034 I 0.706
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I 0.706
BGIBMGA006848 Bombyx mori BGIBMGA006848 I 0.706
KGM_14572 Danaus plexippus KGM_14572 I 0.706
MCINX005468 Melitaea cinxia MCINX005468 I 0.706
TC012723 Tribolium castaneum TC012723 I 0.706
CGI_10017717 Crassostrea gigas CGI_10017717 I 0.703
LotgiG109021 Lottia gigantea LotgiG109021 I 0.702
NV10488 Nasonia vitripennis NV10488 I 0.699
tox4a Gasterosteus aculeatus ENSGACG00000014107 I 0.699
tox4b Danio rerio ENSDARG00000100163 I 0.698
tox4.S Xenopus laevis XB-GENE-993810 I 0.698
GB43084 Apis mellifera GB43084 I 0.697
ENSGGOG00000025016 Gorilla gorilla ENSGGOG00000025016 I 0.692
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.687
ISCW015985 Ixodes scapularis ISCW015985 N 0.686
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N 0.686
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I 0.681
CLEC001918 Cimex lectularius CLEC001918 I 0.678
RPRC000650 Rhodnius prolixus RPRC000650 I 0.678
HHAL000823-PA Halyomorpha halys HHAL000823-PA I 0.678
TMUE_s0011001600 Trichuris muris TMUE_s0011001600 I 0.674
TTRE_0000401801 Trichuris trichiura TTRE_0000401801 I 0.674
ACYPI005775 Acyrthosiphon pisum ACYPI005775 I 0.674
AALB006415 Anopheles albimanus AALB006415 I 0.672
AGAP000281 Anopheles gambiae AGAP000281 I 0.672
AARA010616 Anopheles arabiensis AARA010616 I 0.672
ISCW018867 Ixodes scapularis ISCW018867 I 0.672
AMEM006878 Anopheles merus AMEM006878 I 0.672
AMEC012857 Anopheles melas AMEC012857 I 0.672
AATE016215 Anopheles atroparvus AATE016215 I 0.672
ASTEI07799 Anopheles stephensi ASTEI07799 I 0.672
ADAC003252 Anopheles darlingi ADAC003252 I 0.672
AFAF011136 Anopheles farauti AFAF011136 I 0.672
ASIS016667 Anopheles sinensis ASIS016667 I 0.672
ACUA004409 Anopheles culicifacies ACUA004409 I 0.672
XP_002936155 Xenopus tropicalis XP_002936155 N 0.667
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N 0.667
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N 0.667
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N 0.667
ENSXMAG00000016763 Xiphophorus maculatus ENSXMAG00000016763 N 0.658
ENSPFOG00000008402 Poecilia formosa ENSPFOG00000008402 N 0.658
ENSTGUG00000003811 Taeniopygia guttata ENSTGUG00000003811 N 0.658
tox2 Tetraodon nigroviridis ENSTNIG00000005683 N 0.658
ENSSSCG00000023554 Sus scrofa ENSSSCG00000023554 N 0.658
tox2 Oryzias latipes ENSORLG00000004818 N 0.658
ENSGMOG00000008081 Gadus morhua ENSGMOG00000008081 N 0.658
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.658
tox2 Gasterosteus aculeatus ENSGACG00000006914 N 0.658
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N 0.656
SMU15029818 Schmidtea mediterranea SMU15029818 I 0.656
TMUE_s0009009400 Trichuris muris TMUE_s0009009400 N 0.652
TTRE_0000108401 Trichuris trichiura TTRE_0000108401 N 0.652
D918_09264 Trichuris suis D918_09264 N 0.652
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N 0.648
nRc.2.0.1.g42996 Romanomermis culicivorax nRc.2.0.1.g42996 N 0.638
ENSONIG00000000284 Oreochromis niloticus ENSONIG00000000284 N 0.637
tox4b Oryzias latipes ENSORLG00000008779 N 0.637
ENSPFOG00000002336 Poecilia formosa ENSPFOG00000002336 N 0.637
tox4b Takifugu rubripes ENSTRUG00000002594 N 0.637
tox4b Tetraodon nigroviridis ENSTNIG00000003691 N 0.637
ENSMMUG00000014077 Macaca mulatta ENSMMUG00000014077 N 0.637
LCUP006200 Lucilia cuprina LCUP006200 N 0.636
HelroG145107 Helobdella robusta HelroG145107 N 0.626
D917_02150 Trichinella nativa D917_02150 N 0.624
EFV61455 Trichinella spiralis EFV61455 N 0.624
nDi.2.2.2.g11099 Dirofilaria immitis nDi.2.2.2.g11099 N 0.623
EEL_0000223401 Elaeophora elaphi EEL_0000223401 N 0.623
LOAG_18151 Loa loa LOAG_18151 N 0.623
Bm4188 Brugia malayi Bm4188 N 0.623
WUBG_03914 Wuchereria bancrofti WUBG_03914 N 0.623
nAv.1.0.1.g02116 Acanthocheilonema viteae nAv.1.0.1.g02116 N 0.623
GPUH_0000021901 Gongylonema pulchrum GPUH_0000021901 N 0.617
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.617
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.610
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N 0.604
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N 0.604
WBGene00236865 Onchocerca volvulus WBGene00236865 N 0.604
ACEP19638 Atta cephalotes ACEP19638 I 0.600
nLs.2.1.2.g04689 Litomosoides sigmodontis nLs.2.1.2.g04689 N 0.594
MDOA008605 Musca domestica MDOA008605 N 0.593
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N 0.571
ASIM_0001958001 Anisakis simplex ASIM_0001958001 N 0.566
BTMF_0001006201 Brugia timori BTMF_0001006201 I 0.560
TTHERM_00216040 Tetrahymena thermophila TTHERM_00216040 N 0.547
L798_00437 Zootermopsis nevadensis L798_00437 N 0.545
AMIN005634 Anopheles minimus AMIN005634 N 0.538
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.532
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.532
D918_03887 Trichuris suis D918_03887 N 0.532
AMAM014030 Anopheles maculatus AMAM014030 N 0.532
EFV52201 Trichinella spiralis EFV52201 N 0.532
AEPI010254 Anopheles epiroticus AEPI010254 N 0.532
AFUN005717 Anopheles funestus AFUN005717 N 0.530
TCLT_0000844001 Thelazia callipaeda TCLT_0000844001 N 0.508
MESCA003479 Megaselia scalaris MESCA003479 N 0.507
ENSMMUP00000034886 Macaca fascicularis ENSMMUP00000034886 N 0.505
ENSTGUG00000014902 Taeniopygia guttata ENSTGUG00000014902 N 0.504
Hsal_06265--XP_624018.2_APIME Harpegnathos saltator Hsal_06265--XP_624018.2_APIME N 0.498
TOX2 Sorex araneus ENSSARG00000001080 N 0.498
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.497
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.497
RO3G_07013 Rhizopus oryzae RO3G_07013 I 0.496
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.494
ACAC_0000973801 Angiostrongylus cantonensis ACAC_0000973801 N 0.484
ANCCAN_09463 Ancylostoma caninum ANCCAN_09463 N 0.484
ANCDUO_06783 Ancylostoma duodenale ANCDUO_06783 N 0.484
ANCCEY_15064 Ancylostoma ceylanicum ANCCEY_15064 N 0.484
ANCCEY_15918 Ancylostoma ceylanicum ANCCEY_15918 N 0.484
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.484
DICVIV_00270 Dictyocaulus viviparus DICVIV_00270 N 0.484
SVUK_0000363901 Strongylus vulgaris SVUK_0000363901 N 0.484
HCOI01215700 Haemonchus contortus HCOI01215700 N 0.484
estExt_fgeneshMC_pg.C_20910 Mucor circinelloides estExt_fgeneshMC_pg.C_20910 I 0.484
NECAME_01599 Necator americanus NECAME_01599 N 0.484
TELCIR_16246 Teladorsagia circumcincta TELCIR_16246 N 0.484
OESDEN_01314 Oesophagostomum dentatum OESDEN_01314 N 0.484
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N 0.484
HCOI00076900 Haemonchus contortus HCOI00076900 N 0.484
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.483
SAPIO_CDS3355 Scedosporium apiospermum SAPIO_CDS3355 I 0.483
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I 0.483
PHUM393920 Pediculus humanus PHUM393920 N 0.483
RO3G_15755 Rhizopus oryzae RO3G_15755 I 0.482
L892_g13433 Steinernema scapterisci L892_g13433 I 0.480
O9G_002262 Rozella allomycis O9G_002262 I 0.477
L889_g13125 Steinernema feltiae L889_g13125 N 0.474
TCNE_0000652201 Toxocara canis TCNE_0000652201 N 0.474
RO3G_07543 Rhizopus oryzae RO3G_07543 I 0.474
SSTP_0001066100 Strongyloides stercoralis SSTP_0001066100 N 0.473
SPAL_0001270100 Strongyloides papillosus SPAL_0001270100 N 0.473
SVE_0367300 Strongyloides venezuelensis SVE_0367300 N 0.473
PTRK_0000294100 Parastrongyloides trichosuri PTRK_0000294100 N 0.473
RO3G_05222 Rhizopus oryzae RO3G_05222 N 0.470
ALUE_0000699101 Ascaris lumbricoides ALUE_0000699101 N 0.468
RO3G_16060 Rhizopus oryzae RO3G_16060 I 0.468
ASU_00726 Ascaris suum ASU_00726 N 0.468
GSTUM_00011974001 Tuber melanosporum GSTUM_00011974001 I 0.462
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N 0.460
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.459
NCU02819 Neurospora crassa NCU02819 D 0.458
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.458
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.458
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.458
fgeneshMC_pg.3_#_1190 Mucor circinelloides fgeneshMC_pg.3_#_1190 I 0.455
ENSAPLG00000003986 Anas platyrhynchos ENSAPLG00000003986 N 0.453
RO3G_09728 Rhizopus oryzae RO3G_09728 I 0.450
DRE_06603 Drechslerella stenobrocha DRE_06603 I 0.450
Myotis_brandtii_DAP3_10031965 Myotis brandtii Myotis_brandtii_DAP3_10031965 N 0.449
THITE_2121767 Thielavia terrestris THITE_2121767 I 0.446
PODANS_1_7390 Podospora anserina PODANS_1_7390 I 0.446
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I 0.446
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I 0.446
L596_g8243 Steinernema carpocapsae L596_g8243 N 0.445
L893_g19156 Steinernema glaseri L893_g19156 N 0.445
L892_g19322 Steinernema scapterisci L892_g19322 N 0.445
L898_g14011 Steinernema monticolum L898_g14011 N 0.445
fgeneshMC_pg.1_#_1771 Mucor circinelloides fgeneshMC_pg.1_#_1771 I 0.445
Hmgb1 Rattus norvegicus ENSRNOG00000029813 N 0.445
nRc.2.0.1.g21669 Romanomermis culicivorax nRc.2.0.1.g21669 N 0.439
EDI_340970 Entamoeba dispar EDI_340970 N 0.438
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N 0.436
CLEC003860 Cimex lectularius CLEC003860 I 0.436
Minc06622 Meloidogyne incognita Minc06622 N 0.436
GK17179 Drosophila willistoni FBgn0219178 N 0.434
BGLB013489 Biomphalaria glabrata BGLB013489 N 0.434
nRc.2.0.1.g36724 Romanomermis culicivorax nRc.2.0.1.g36724 N 0.432
gw1.72.30.1 Phycomyces blakesleeanus gw1.72.30.1 I 0.429
EFV56095 Trichinella spiralis EFV56095 N 0.428
D917_05048 Trichinella nativa D917_05048 N 0.428
GLYMA01G33240 Glycine max GLYMA01G33240 I 0.428
PPA19750 Pristionchus pacificus PPA19750 N 0.428
CJA30740 Caenorhabditis japonica CJA30740 N 0.427
CRE14258 Caenorhabditis remanei CRE14258 N 0.427
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.427
CJA03316 Caenorhabditis japonica CJA03316 N 0.427
CBN31697 Caenorhabditis brenneri CBN31697 N 0.427
CBN07735 Caenorhabditis brenneri CBN07735 N 0.427
CBG11867 Caenorhabditis briggsae CBG11867 N 0.427
BGLB005856 Biomphalaria glabrata BGLB005856 N 0.426
BGLB012439 Biomphalaria glabrata BGLB012439 N 0.426
ssrp1a Danio rerio ENSDARG00000037397 I 0.426
BN7_5566 Wickerhamomyces ciferrii BN7_5566 I 0.425
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.421
YALI0_C11671g Yarrowia lipolytica YALI0_C11671g I 0.421
Gorai.006G024900 Gossypium raimondii Gorai.006G024900 I 0.420
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.418
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I 0.416
SBOR_0403 Sclerotinia borealis SBOR_0403 I 0.416
M7I_1578 Glarea lozoyensis M7I_1578 I 0.416
MBM_02410 Marssonina brunnea MBM_02410 I 0.416
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.416
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.416
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.416
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.416
BBA_01214 Beauveria bassiana BBA_01214 I 0.415
TPHA_0A03740 Tetrapisispora phaffii TPHA_0A03740 I 0.415
RSKR_0000607700 Rhabditophanes kr3021 RSKR_0000607700 N 0.415