L596_g21045 (Steinernema carpocapsae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 L596_g21045 T336494_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.421 0.299
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g21045.t1 Sox 129 196

Links

Other Sox family TFs
Other Steinernema carpocapsae TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L892_g13433 Steinernema scapterisci L892_g13433 I 0.695
EFV56095 Trichinella spiralis EFV56095 N 0.543
D917_05048 Trichinella nativa D917_05048 N 0.543
EFV56090 Trichinella spiralis EFV56090 N 0.516
D917_05046 Trichinella nativa D917_05046 N 0.516
D918_06015 Trichuris suis D918_06015 N 0.516
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N 0.516
ACEP19638 Atta cephalotes ACEP19638 I 0.510
D918_05288 Trichuris suis D918_05288 N 0.507
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.507
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.502
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.501
TTHERM_00216040 Tetrahymena thermophila TTHERM_00216040 N 0.496
estExt_fgeneshPB_pg.C_360007 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_360007 I 0.490
BTMF_0001006201 Brugia timori BTMF_0001006201 I 0.488
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.486
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.486
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.486
CRE28315 Caenorhabditis remanei CRE28315 N 0.485
TCM_014800 Theobroma cacao TCM_014800 N 0.484
mgf006762m Mimulus guttatus mgf006762m N 0.484
LotgiG109021 Lottia gigantea LotgiG109021 I 0.483
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I 0.483
CGI_10017717 Crassostrea gigas CGI_10017717 I 0.483
HMEL005034 Heliconius melpomene HMEL005034 I 0.480
MCINX005468 Melitaea cinxia MCINX005468 I 0.480
BGIBMGA006848 Bombyx mori BGIBMGA006848 I 0.480
TC012723 Tribolium castaneum TC012723 I 0.480
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I 0.480
CBN15844 Caenorhabditis brenneri CBN15844 N 0.480
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.480
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.480
KGM_14572 Danaus plexippus KGM_14572 I 0.480
TMUE_s0089001400 Trichuris muris TMUE_s0089001400 N 0.480
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.474
tox4a Gasterosteus aculeatus ENSGACG00000014107 I 0.474
NV10488 Nasonia vitripennis NV10488 I 0.474
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I 0.474
ISCW015985 Ixodes scapularis ISCW015985 N 0.474
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N 0.474
GB43084 Apis mellifera GB43084 I 0.472
ISCW005293 Ixodes scapularis ISCW005293 N 0.467
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I 0.465
RO3G_07751 Rhizopus oryzae RO3G_07751 I 0.460
TTRE_0000108401 Trichuris trichiura TTRE_0000108401 N 0.456
TMUE_s0009009400 Trichuris muris TMUE_s0009009400 N 0.456
NECAME_06830 Necator americanus NECAME_06830 N 0.456
SMAR009325 Strigamia maritima SMAR009325 N 0.456
D918_09264 Trichuris suis D918_09264 N 0.456
HHAL000823-PA Halyomorpha halys HHAL000823-PA I 0.453
CLEC001918 Cimex lectularius CLEC001918 I 0.453
ACYPI005775 Acyrthosiphon pisum ACYPI005775 I 0.453
RPRC000650 Rhodnius prolixus RPRC000650 I 0.453
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.452
TTRE_0000401801 Trichuris trichiura TTRE_0000401801 I 0.449
TMUE_s0011001600 Trichuris muris TMUE_s0011001600 I 0.449
HelroG145107 Helobdella robusta HelroG145107 N 0.449
SVUK_0000686401 Strongylus vulgaris SVUK_0000686401 N 0.448
AARA010616 Anopheles arabiensis AARA010616 I 0.447
AALB006415 Anopheles albimanus AALB006415 I 0.447
AATE016215 Anopheles atroparvus AATE016215 I 0.447
AMEC012857 Anopheles melas AMEC012857 I 0.447
ASTEI07799 Anopheles stephensi ASTEI07799 I 0.447
ACUA004409 Anopheles culicifacies ACUA004409 I 0.447
ISCW018867 Ixodes scapularis ISCW018867 I 0.447
AGAP000281 Anopheles gambiae AGAP000281 I 0.447
ADAC003252 Anopheles darlingi ADAC003252 I 0.447
AMEM006878 Anopheles merus AMEM006878 I 0.447
ASIS016667 Anopheles sinensis ASIS016667 I 0.447
AFAF011136 Anopheles farauti AFAF011136 I 0.447
MESCA003479 Megaselia scalaris MESCA003479 N 0.447
AFUN005717 Anopheles funestus AFUN005717 N 0.447
LCUP006200 Lucilia cuprina LCUP006200 N 0.445
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N 0.444
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.444
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N 0.444
WBGene00236865 Onchocerca volvulus WBGene00236865 N 0.444
Sakowv30031460m.g Saccoglossus kowalevskii Sakowv30031460m.g N 0.444
L798_00437 Zootermopsis nevadensis L798_00437 N 0.444
PHUM393920 Pediculus humanus PHUM393920 N 0.444
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N 0.442
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N 0.442
XP_002936155 Xenopus tropicalis XP_002936155 N 0.442
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N 0.442
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N 0.442
CJA17191 Caenorhabditis japonica CJA17191 N 0.441
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N 0.441
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.441
TELCIR_19210 Teladorsagia circumcincta TELCIR_19210 N 0.441
tox4.S Xenopus laevis XB-GENE-993810 I 0.440
ENSGGOG00000025016 Gorilla gorilla ENSGGOG00000025016 I 0.440
ENSPFOG00000008402 Poecilia formosa ENSPFOG00000008402 N 0.440
ENSTGUG00000003811 Taeniopygia guttata ENSTGUG00000003811 N 0.440
tox2 Tetraodon nigroviridis ENSTNIG00000005683 N 0.440
tox2 Oryzias latipes ENSORLG00000004818 N 0.440
ENSXMAG00000016763 Xiphophorus maculatus ENSXMAG00000016763 N 0.440
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.440
ENSSSCG00000023554 Sus scrofa ENSSSCG00000023554 N 0.440
ENSGMOG00000008081 Gadus morhua ENSGMOG00000008081 N 0.440
tox4b Danio rerio ENSDARG00000100163 I 0.440
tox2 Gasterosteus aculeatus ENSGACG00000006914 N 0.440
AEPI010254 Anopheles epiroticus AEPI010254 N 0.438
AMAM014030 Anopheles maculatus AMAM014030 N 0.438
AMIN005634 Anopheles minimus AMIN005634 N 0.438
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.438
D918_03887 Trichuris suis D918_03887 N 0.438
EFV52201 Trichinella spiralis EFV52201 N 0.438
ENSOGAG00000011763 Otolemur garnettii ENSOGAG00000011763 N 0.438
genemark-nMf.1.1.scaf03789-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf03789-processed-gene-0.2 N 0.438
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.438
Minc18174 Meloidogyne incognita Minc18174 N 0.438
L889_g13125 Steinernema feltiae L889_g13125 N 0.434
SMUV_0000135001 Syphacia muris SMUV_0000135001 N 0.433
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.433
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.433
ASIM_0001613301 Anisakis simplex ASIM_0001613301 N 0.433
ASU_00939 Ascaris suum ASU_00939 N 0.433
SBOR_0403 Sclerotinia borealis SBOR_0403 I 0.433
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I 0.433
TCLT_0000189901 Thelazia callipaeda TCLT_0000189901 N 0.432
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N 0.431
tetur21g01330 Tetranychus urticae tetur21g01330 N 0.431
Lus10023090.g Linum usitatissimum Lus10023090.g N 0.430
LotgiG176647 Lottia gigantea LotgiG176647 N 0.430
fgenesh2_pg.scaffold_1690000001 Branchiostoma floridae fgenesh2_pg.scaffold_1690000001 N 0.430
Gorai.006G024900 Gossypium raimondii Gorai.006G024900 I 0.430
MhA1_Contig1224.frz3.gene1 Meloidogyne hapla MhA1_Contig1224.frz3.gene1 N 0.428
EEL_0000223401 Elaeophora elaphi EEL_0000223401 N 0.426
nDi.2.2.2.g11099 Dirofilaria immitis nDi.2.2.2.g11099 N 0.426
WUBG_03914 Wuchereria bancrofti WUBG_03914 N 0.426
GPUH_0000021901 Gongylonema pulchrum GPUH_0000021901 N 0.426
Bm4188 Brugia malayi Bm4188 N 0.426
LOAG_18151 Loa loa LOAG_18151 N 0.426
estExt_Genewise1.C_20300 Phycomyces blakesleeanus estExt_Genewise1.C_20300 I 0.425
ENSAMXG00000016832 Astyanax mexicanus ENSAMXG00000016832 N 0.425
estExt_Genewise1Plus.C_11422 Mucor circinelloides estExt_Genewise1Plus.C_11422 I 0.425
BTMF_0001478401 Brugia timori BTMF_0001478401 N 0.424
gww1.1.1.1342.1 Pichia stipitis gww1.1.1.1342.1 I 0.424
PICST_23779 Scheffersomyces stipitis PICST_23779 I 0.424
WBGene00238178 Onchocerca volvulus WBGene00238178 N 0.423
nRc.2.0.1.g42996 Romanomermis culicivorax nRc.2.0.1.g42996 N 0.423
nOo.2.0.1.g07918 Onchocerca ochengi nOo.2.0.1.g07918 N 0.423
nLs.2.1.2.g08566 Litomosoides sigmodontis nLs.2.1.2.g08566 N 0.423
nDi.2.2.2.g06671 Dirofilaria immitis nDi.2.2.2.g06671 N 0.423
WUBG_00348 Wuchereria bancrofti WUBG_00348 N 0.423
Bm2393 Brugia malayi Bm2393 N 0.423
LOAG_15875 Loa loa LOAG_15875 N 0.423
GPUH_0001659301 Gongylonema pulchrum GPUH_0001659301 N 0.423
nDi.2.2.2.g10298 Dirofilaria immitis nDi.2.2.2.g10298 N 0.423
gene21411-v1.0-hybrid Fragaria vesca gene21411-v1.0-hybrid N 0.421
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.421
THITE_2121767 Thielavia terrestris THITE_2121767 I 0.421
nAv.1.0.1.g02116 Acanthocheilonema viteae nAv.1.0.1.g02116 N 0.421
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I 0.421
MBM_02410 Marssonina brunnea MBM_02410 I 0.421
M7I_1578 Glarea lozoyensis M7I_1578 I 0.421
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.421
PODANS_1_7390 Podospora anserina PODANS_1_7390 I 0.421
nLs.2.1.2.g04689 Litomosoides sigmodontis nLs.2.1.2.g04689 N 0.421
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.421
NCU02819 Neurospora crassa NCU02819 D 0.421
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N 0.420
ASIM_0001958001 Anisakis simplex ASIM_0001958001 N 0.419
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.418
CapteG221993 Capitella teleta CapteG221993 N 0.417