CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L892_g13433
(
Steinernema scapterisci
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
L892_g13433
T336530_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.416
0.273
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L892_g13433.t1
Sox
63
130
KRRLTGSAYSNFFRTQQNAIKMKNRNASFGDISKEIASMWLSLDESTKAQYKRSSDMKKMEYMKKVAL
Links
Other
Sox
family TFs
Other
Steinernema scapterisci
TFs
165 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g21045
Steinernema carpocapsae
L596_g21045
I
0.695
EFV56095
Trichinella spiralis
EFV56095
N
0.543
D917_05048
Trichinella nativa
D917_05048
N
0.543
EFV56090
Trichinella spiralis
EFV56090
N
0.516
TMUE_s0227000300
Trichuris muris
TMUE_s0227000300
N
0.516
D918_06015
Trichuris suis
D918_06015
N
0.516
D917_05046
Trichinella nativa
D917_05046
N
0.516
ACEP19638
Atta cephalotes
ACEP19638
I
0.515
BGLB013626
Biomphalaria glabrata
BGLB013626
N
0.510
D918_05288
Trichuris suis
D918_05288
N
0.507
TTHERM_00216040
Tetrahymena thermophila
TTHERM_00216040
N
0.503
DME_0000632401
Dracunculus medinensis
DME_0000632401
N
0.502
DICVIV_02621
Dictyocaulus viviparus
DICVIV_02621
N
0.501
estExt_fgeneshPB_pg.C_360007
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_360007
I
0.490
tetur31g00840
Tetranychus urticae
tetur31g00840
N
0.486
tetur31g00660
Tetranychus urticae
tetur31g00660
N
0.486
tetur31g01070
Tetranychus urticae
tetur31g01070
N
0.486
CRE28315
Caenorhabditis remanei
CRE28315
N
0.485
BTMF_0001006201
Brugia timori
BTMF_0001006201
I
0.485
SPU_002060
Strongylocentrotus purpuratus
SPU_002060
N
0.483
TCM_014800
Theobroma cacao
TCM_014800
N
0.481
mgf006762m
Mimulus guttatus
mgf006762m
N
0.481
KGM_14572
Danaus plexippus
KGM_14572
I
0.480
LotgiG109021
Lottia gigantea
LotgiG109021
I
0.480
MCINX005468
Melitaea cinxia
MCINX005468
I
0.480
TMUE_s0089001400
Trichuris muris
TMUE_s0089001400
N
0.480
CGI_10017717
Crassostrea gigas
CGI_10017717
I
0.480
BGIBMGA006848
Bombyx mori
BGIBMGA006848
I
0.480
Ocbimv22012197m.g
Octopus bimaculoides
Ocbimv22012197m.g
I
0.480
HMEL005034
Heliconius melpomene
HMEL005034
I
0.480
TC012723
Tribolium castaneum
TC012723
I
0.480
DAPPUDRAFT_19853
Daphnia pulex
DAPPUDRAFT_19853
I
0.480
CBN15844
Caenorhabditis brenneri
CBN15844
N
0.479
Sakowv30024549m.g
Saccoglossus kowalevskii
Sakowv30024549m.g
N
0.476
Hba_16915
Heterorhabditis bacteriophora
Hba_16915
I
0.475
ISCW015985
Ixodes scapularis
ISCW015985
N
0.474
ENSXMAG00000000362
Xiphophorus maculatus
ENSXMAG00000000362
I
0.474
SBAD_0000070901
Soboliphyme baturini
SBAD_0000070901
I
0.474
NV10488
Nasonia vitripennis
NV10488
I
0.474
tox4a
Gasterosteus aculeatus
ENSGACG00000014107
I
0.474
GB43084
Apis mellifera
GB43084
I
0.472
ISCW005293
Ixodes scapularis
ISCW005293
N
0.467
ENSGMOG00000015161
Gadus morhua
ENSGMOG00000015161
I
0.465
RO3G_07751
Rhizopus oryzae
RO3G_07751
I
0.460
SMAR009325
Strigamia maritima
SMAR009325
N
0.459
ACYPI005775
Acyrthosiphon pisum
ACYPI005775
I
0.458
NECAME_06830
Necator americanus
NECAME_06830
N
0.456
D918_09264
Trichuris suis
D918_09264
N
0.453
RPRC000650
Rhodnius prolixus
RPRC000650
I
0.453
TMUE_s0009009400
Trichuris muris
TMUE_s0009009400
N
0.453
TTRE_0000108401
Trichuris trichiura
TTRE_0000108401
N
0.453
HHAL000823-PA
Halyomorpha halys
HHAL000823-PA
I
0.453
CLEC001918
Cimex lectularius
CLEC001918
I
0.453
SNAPOd2T00002710001
Oikopleura dioica
SNAPOd2T00002710001
I
0.452
AFUN005717
Anopheles funestus
AFUN005717
N
0.449
SVUK_0000686401
Strongylus vulgaris
SVUK_0000686401
N
0.448
AFAF011136
Anopheles farauti
AFAF011136
I
0.447
ASTEI07799
Anopheles stephensi
ASTEI07799
I
0.447
ASIS016667
Anopheles sinensis
ASIS016667
I
0.447
ACUA004409
Anopheles culicifacies
ACUA004409
I
0.447
TTRE_0000401801
Trichuris trichiura
TTRE_0000401801
I
0.447
AALB006415
Anopheles albimanus
AALB006415
I
0.447
AMEC012857
Anopheles melas
AMEC012857
I
0.447
AARA010616
Anopheles arabiensis
AARA010616
I
0.447
AATE016215
Anopheles atroparvus
AATE016215
I
0.447
AMEM006878
Anopheles merus
AMEM006878
I
0.447
ADAC003252
Anopheles darlingi
ADAC003252
I
0.447
ISCW018867
Ixodes scapularis
ISCW018867
I
0.447
TMUE_s0011001600
Trichuris muris
TMUE_s0011001600
I
0.447
AGAP000281
Anopheles gambiae
AGAP000281
I
0.447
HelroG145107
Helobdella robusta
HelroG145107
N
0.446
Cflo_00230--XP_624018.2_APIME
Camponotus floridanus
Cflo_00230--XP_624018.2_APIME
N
0.446
PHUM393920
Pediculus humanus
PHUM393920
N
0.445
L798_00437
Zootermopsis nevadensis
L798_00437
N
0.444
Sakowv30031460m.g
Saccoglossus kowalevskii
Sakowv30031460m.g
N
0.444
LCUP006200
Lucilia cuprina
LCUP006200
N
0.443
ENSOGAG00000011763
Otolemur garnettii
ENSOGAG00000011763
N
0.443
nOo.2.0.1.g12207
Onchocerca ochengi
nOo.2.0.1.g12207
N
0.442
WBGene00236865
Onchocerca volvulus
WBGene00236865
N
0.442
OFLC_0001222801
Onchocerca flexuosa
OFLC_0001222801
N
0.442
CJA17191
Caenorhabditis japonica
CJA17191
N
0.441
TELCIR_25179
Teladorsagia circumcincta
TELCIR_25179
N
0.441
TELCIR_19210
Teladorsagia circumcincta
TELCIR_19210
N
0.441
ENSXMAG00000016763
Xiphophorus maculatus
ENSXMAG00000016763
N
0.440
ENSGMOG00000013406
Gadus morhua
ENSGMOG00000013406
N
0.440
ENSSSCG00000023554
Sus scrofa
ENSSSCG00000023554
N
0.440
tox2
Tetraodon nigroviridis
ENSTNIG00000005683
N
0.440
ENSTGUG00000003811
Taeniopygia guttata
ENSTGUG00000003811
N
0.440
tox2
Oryzias latipes
ENSORLG00000004818
N
0.440
XP_002936155
Xenopus tropicalis
XP_002936155
N
0.440
tox4.S
Xenopus laevis
XB-GENE-993810
I
0.440
ENSPFOG00000008402
Poecilia formosa
ENSPFOG00000008402
N
0.440
ENSGMOG00000008081
Gadus morhua
ENSGMOG00000008081
N
0.440
tox2
Takifugu rubripes
ENSTRUG00000013848
N
0.440
fgenesh2_pg.scaffold_19000069
Branchiostoma floridae
fgenesh2_pg.scaffold_19000069
N
0.440
tox4b
Danio rerio
ENSDARG00000100163
I
0.440
PEQ_0000291001
Parascaris equorum
PEQ_0000291001
I
0.440
tox2
Gasterosteus aculeatus
ENSGACG00000006914
N
0.440
EFV52201
Trichinella spiralis
EFV52201
N
0.440
ENSGGOG00000025016
Gorilla gorilla
ENSGGOG00000025016
I
0.440
fgenesh2_pg.scaffold_177000008
Branchiostoma floridae
fgenesh2_pg.scaffold_177000008
N
0.440
ENSONIG00000016627
Oreochromis niloticus
ENSONIG00000016627
N
0.440
genemark-nMf.1.1.scaf03789-processed-gene-0.2
Meloidogyne floridensis
genemark-nMf.1.1.scaf03789-processed-gene-0.2
N
0.439
Minc18174
Meloidogyne incognita
Minc18174
N
0.439
AEPI010254
Anopheles epiroticus
AEPI010254
N
0.438
AMAM014030
Anopheles maculatus
AMAM014030
N
0.438
CpipJ_CPIJ003178
Culex pipiens
CpipJ_CPIJ003178
N
0.438
D918_03887
Trichuris suis
D918_03887
N
0.438
AMIN005634
Anopheles minimus
AMIN005634
N
0.438
CPIJ003178
Culex quinquefasciatus
CPIJ003178
N
0.438
ASIM_0001613301
Anisakis simplex
ASIM_0001613301
N
0.436
L889_g13125
Steinernema feltiae
L889_g13125
N
0.435
ASU_00939
Ascaris suum
ASU_00939
N
0.433
SMUV_0000135001
Syphacia muris
SMUV_0000135001
N
0.433
TCLT_0000189901
Thelazia callipaeda
TCLT_0000189901
N
0.432
ENSCSAVG00000009270
Ciona savignyi
ENSCSAVG00000009270
N
0.431
tetur21g01330
Tetranychus urticae
tetur21g01330
N
0.431
ENSCING00000009516
Ciona intestinalis
ENSCING00000009516
N
0.431
Lus10023090.g
Linum usitatissimum
Lus10023090.g
N
0.430
fgenesh2_pg.scaffold_1690000001
Branchiostoma floridae
fgenesh2_pg.scaffold_1690000001
N
0.430
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
0.429
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
0.429
nLs.2.1.2.g04689
Litomosoides sigmodontis
nLs.2.1.2.g04689
N
0.428
MhA1_Contig1224.frz3.gene1
Meloidogyne hapla
MhA1_Contig1224.frz3.gene1
N
0.428
LotgiG176647
Lottia gigantea
LotgiG176647
N
0.427
nAv.1.0.1.g02116
Acanthocheilonema viteae
nAv.1.0.1.g02116
N
0.426
nRc.2.0.1.g42996
Romanomermis culicivorax
nRc.2.0.1.g42996
N
0.426
estExt_Genewise1Plus.C_11422
Mucor circinelloides
estExt_Genewise1Plus.C_11422
I
0.425
estExt_Genewise1.C_20300
Phycomyces blakesleeanus
estExt_Genewise1.C_20300
I
0.425
gww1.1.1.1342.1
Pichia stipitis
gww1.1.1.1342.1
I
0.424
PICST_23779
Scheffersomyces stipitis
PICST_23779
I
0.424
Gorai.006G024900
Gossypium raimondii
Gorai.006G024900
I
0.424
nDi.2.2.2.g10298
Dirofilaria immitis
nDi.2.2.2.g10298
N
0.423
LOAG_18151
Loa loa
LOAG_18151
N
0.423
LOAG_15875
Loa loa
LOAG_15875
N
0.423
nDi.2.2.2.g11099
Dirofilaria immitis
nDi.2.2.2.g11099
N
0.423
WBGene00238178
Onchocerca volvulus
WBGene00238178
N
0.423
nDi.2.2.2.g06671
Dirofilaria immitis
nDi.2.2.2.g06671
N
0.423
nLs.2.1.2.g08566
Litomosoides sigmodontis
nLs.2.1.2.g08566
N
0.423
nOo.2.0.1.g07918
Onchocerca ochengi
nOo.2.0.1.g07918
N
0.423
Bm4188
Brugia malayi
Bm4188
N
0.423
Bm2393
Brugia malayi
Bm2393
N
0.423
GPUH_0001659301
Gongylonema pulchrum
GPUH_0001659301
N
0.423
WUBG_00348
Wuchereria bancrofti
WUBG_00348
N
0.423
Eucgr.I01920
Eucalyptus grandis
Eucgr.I01920
N
0.423
WUBG_03914
Wuchereria bancrofti
WUBG_03914
N
0.423
RSKR_0000620800
Rhabditophanes kr3021
RSKR_0000620800
N
0.421
EEL_0000223401
Elaeophora elaphi
EEL_0000223401
N
0.421
BTMF_0001478401
Brugia timori
BTMF_0001478401
N
0.421
GPUH_0000021901
Gongylonema pulchrum
GPUH_0000021901
N
0.421
ENSAMXG00000016832
Astyanax mexicanus
ENSAMXG00000016832
N
0.420
gene21411-v1.0-hybrid
Fragaria vesca
gene21411-v1.0-hybrid
N
0.419
CapteG221993
Capitella teleta
CapteG221993
N
0.417
MESCA003479
Megaselia scalaris
MESCA003479
N
0.417
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
0.416
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
0.416
MBM_02410
Marssonina brunnea
MBM_02410
I
0.416
M7I_1578
Glarea lozoyensis
M7I_1578
I
0.416
CPUR_04901
Claviceps purpurea
CPUR_04901
I
0.416
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
0.416
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
0.416
THITE_2121767
Thielavia terrestris
THITE_2121767
I
0.416
SMAC_00615
Sordaria macrospora
SMAC_00615
I
0.416
PPA19750
Pristionchus pacificus
PPA19750
N
0.416
NCU02819
Neurospora crassa
NCU02819
D
0.416