EFV56090 (Trichinella spiralis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 EFV56090 T327425_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EFV56090 Sox 1396 1461

Links

Other Sox family TFs
Other Trichinella spiralis TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
D917_05046 Trichinella nativa D917_05046 N 0.741
D917_05048 Trichinella nativa D917_05048 N 0.708
EFV56095 Trichinella spiralis EFV56095 N 0.708
D918_06015 Trichuris suis D918_06015 N 0.708
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N 0.701
D918_05288 Trichuris suis D918_05288 N 0.623
TMUE_s0089001400 Trichuris muris TMUE_s0089001400 N 0.623
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.535
L889_g13125 Steinernema feltiae L889_g13125 N 0.533
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N 0.531
Minc06622 Meloidogyne incognita Minc06622 N 0.531
ASIM_0001613301 Anisakis simplex ASIM_0001613301 N 0.521
SMUV_0000135001 Syphacia muris SMUV_0000135001 N 0.521
BTMF_0001478401 Brugia timori BTMF_0001478401 N 0.519
L892_g13433 Steinernema scapterisci L892_g13433 I 0.516
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.516
ISCW005293 Ixodes scapularis ISCW005293 N 0.515
ASU_00939 Ascaris suum ASU_00939 N 0.515
SMAR009325 Strigamia maritima SMAR009325 N 0.512
nDi.2.2.2.g10298 Dirofilaria immitis nDi.2.2.2.g10298 N 0.511
nLs.2.1.2.g08566 Litomosoides sigmodontis nLs.2.1.2.g08566 N 0.511
WUBG_00348 Wuchereria bancrofti WUBG_00348 N 0.511
LOAG_15875 Loa loa LOAG_15875 N 0.511
nDi.2.2.2.g06671 Dirofilaria immitis nDi.2.2.2.g06671 N 0.511
GPUH_0001659301 Gongylonema pulchrum GPUH_0001659301 N 0.511
Bm2393 Brugia malayi Bm2393 N 0.511
nOo.2.0.1.g07918 Onchocerca ochengi nOo.2.0.1.g07918 N 0.511
WBGene00238178 Onchocerca volvulus WBGene00238178 N 0.511
TCLT_0000189901 Thelazia callipaeda TCLT_0000189901 N 0.506
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N 0.504
CJA03316 Caenorhabditis japonica CJA03316 N 0.497
RSKR_0000607700 Rhabditophanes kr3021 RSKR_0000607700 N 0.497
CBG11867 Caenorhabditis briggsae CBG11867 N 0.497
CJA30740 Caenorhabditis japonica CJA30740 N 0.497
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.490
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.483
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.483
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.483
CRE28315 Caenorhabditis remanei CRE28315 N 0.482
CBN15844 Caenorhabditis brenneri CBN15844 N 0.478
SPU_025140 Strongylocentrotus purpuratus SPU_025140 N 0.471
CBN07735 Caenorhabditis brenneri CBN07735 N 0.470
CRE14258 Caenorhabditis remanei CRE14258 N 0.470
CBN31697 Caenorhabditis brenneri CBN31697 N 0.470
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.470
OESDEN_01314 Oesophagostomum dentatum OESDEN_01314 N 0.468
SVUK_0000363901 Strongylus vulgaris SVUK_0000363901 N 0.468
TELCIR_16246 Teladorsagia circumcincta TELCIR_16246 N 0.468
ANCCEY_15918 Ancylostoma ceylanicum ANCCEY_15918 N 0.468
NECAME_01599 Necator americanus NECAME_01599 N 0.468
HCOI00076900 Haemonchus contortus HCOI00076900 N 0.468
HCOI01215700 Haemonchus contortus HCOI01215700 N 0.468
DICVIV_00270 Dictyocaulus viviparus DICVIV_00270 N 0.468
ANCDUO_06783 Ancylostoma duodenale ANCDUO_06783 N 0.468
ANCCAN_09463 Ancylostoma caninum ANCCAN_09463 N 0.468
ANCCEY_15064 Ancylostoma ceylanicum ANCCEY_15064 N 0.468
ACAC_0000973801 Angiostrongylus cantonensis ACAC_0000973801 N 0.468
L898_g14011 Steinernema monticolum L898_g14011 N 0.466
Sakowv30031460m.g Saccoglossus kowalevskii Sakowv30031460m.g N 0.464
fgenesh2_pg.scaffold_1690000001 Branchiostoma floridae fgenesh2_pg.scaffold_1690000001 N 0.463
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.462
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N 0.456
CGI_10018256 Crassostrea gigas CGI_10018256 N 0.453
augustus_masked-nMf.1.1.scaf00485-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00485-processed-gene-0.1 N 0.451
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.450
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.450
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.450
BXY_0575000 Bursaphelenchus xylophilus BXY_0575000 N 0.448
WBGene00239172 Onchocerca volvulus WBGene00239172 N 0.443
nDi.2.2.2.g01867 Dirofilaria immitis nDi.2.2.2.g01867 N 0.443
LOAG_11340 Loa loa LOAG_11340 N 0.443
Bm7765 Brugia malayi Bm7765 N 0.443
WUBG_03167 Wuchereria bancrofti WUBG_03167 N 0.443
Bm9369 Brugia malayi Bm9369 N 0.443
OFLC_0000194401 Onchocerca flexuosa OFLC_0000194401 N 0.443
nOo.2.0.1.g03638 Onchocerca ochengi nOo.2.0.1.g03638 N 0.443
nLs.2.1.2.g07200 Litomosoides sigmodontis nLs.2.1.2.g07200 N 0.443
nAv.1.0.1.g05839 Acanthocheilonema viteae nAv.1.0.1.g05839 N 0.443
BTMF_0001523401 Brugia timori BTMF_0001523401 N 0.443
EEL_0000724001 Elaeophora elaphi EEL_0000724001 N 0.443
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.443
CJA17191 Caenorhabditis japonica CJA17191 N 0.439
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.437
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.433
ACEP19638 Atta cephalotes ACEP19638 I 0.432
AFUN005717 Anopheles funestus AFUN005717 N 0.432
tetur21g01330 Tetranychus urticae tetur21g01330 N 0.432
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.430
D918_03887 Trichuris suis D918_03887 N 0.429
L798_00437 Zootermopsis nevadensis L798_00437 N 0.429
AMAM014030 Anopheles maculatus AMAM014030 N 0.429
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.429
EFV52201 Trichinella spiralis EFV52201 N 0.429
LotgiG176647 Lottia gigantea LotgiG176647 N 0.429
PHUM393920 Pediculus humanus PHUM393920 N 0.429
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.429
AEPI010254 Anopheles epiroticus AEPI010254 N 0.429
AMIN005634 Anopheles minimus AMIN005634 N 0.429
Minc18174 Meloidogyne incognita Minc18174 N 0.428
genemark-nMf.1.1.scaf03789-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf03789-processed-gene-0.2 N 0.428
PEQ_0000212901 Parascaris equorum PEQ_0000212901 N 0.428
MhA1_Contig1224.frz3.gene1 Meloidogyne hapla MhA1_Contig1224.frz3.gene1 N 0.426
LotgiG144192 Lottia gigantea LotgiG144192 N 0.426
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.425
MDOA008474 Musca domestica MDOA008474 N 0.424
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N 0.422
mgf006762m Mimulus guttatus mgf006762m N 0.418
TCM_014800 Theobroma cacao TCM_014800 N 0.418
LCUP007789 Lucilia cuprina LCUP007789 N 0.416