CBN15844 (Caenorhabditis brenneri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CBN15844 T326905_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CBN15844 Sox 69 133

Links

Other Sox family TFs
Other Caenorhabditis brenneri TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG18873 Caenorhabditis briggsae CBG18873 N 0.601
CJA17191 Caenorhabditis japonica CJA17191 N 0.591
hmg-6 Caenorhabditis elegans WBGene00009827 N 0.563
CRE28315 Caenorhabditis remanei CRE28315 N 0.546
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.527
WBGene00238178 Onchocerca volvulus WBGene00238178 N 0.517
nLs.2.1.2.g08566 Litomosoides sigmodontis nLs.2.1.2.g08566 N 0.517
nOo.2.0.1.g07918 Onchocerca ochengi nOo.2.0.1.g07918 N 0.517
SMUV_0000135001 Syphacia muris SMUV_0000135001 N 0.517
nDi.2.2.2.g06671 Dirofilaria immitis nDi.2.2.2.g06671 N 0.517
Bm2393 Brugia malayi Bm2393 N 0.517
nDi.2.2.2.g10298 Dirofilaria immitis nDi.2.2.2.g10298 N 0.517
WUBG_00348 Wuchereria bancrofti WUBG_00348 N 0.517
SVUK_0000686401 Strongylus vulgaris SVUK_0000686401 N 0.516
LOAG_15875 Loa loa LOAG_15875 N 0.516
GPUH_0001659301 Gongylonema pulchrum GPUH_0001659301 N 0.516
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.516
ASIM_0001613301 Anisakis simplex ASIM_0001613301 N 0.516
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.515
TMUE_s0089001400 Trichuris muris TMUE_s0089001400 N 0.514
SMAR009325 Strigamia maritima SMAR009325 N 0.512
ASU_00939 Ascaris suum ASU_00939 N 0.511
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.509
fgenesh2_pg.scaffold_1690000001 Branchiostoma floridae fgenesh2_pg.scaffold_1690000001 N 0.508
TCLT_0000189901 Thelazia callipaeda TCLT_0000189901 N 0.508
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.507
tetur21g01330 Tetranychus urticae tetur21g01330 N 0.499
NECAME_06830 Necator americanus NECAME_06830 N 0.498
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.497
TELCIR_19210 Teladorsagia circumcincta TELCIR_19210 N 0.497
ISCW005293 Ixodes scapularis ISCW005293 N 0.493
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.492
SPU_025140 Strongylocentrotus purpuratus SPU_025140 N 0.489
D918_05288 Trichuris suis D918_05288 N 0.486
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.485
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.485
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.485
Sakowv30031460m.g Saccoglossus kowalevskii Sakowv30031460m.g N 0.481
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.480
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.480
L892_g13433 Steinernema scapterisci L892_g13433 I 0.479
D917_05046 Trichinella nativa D917_05046 N 0.478
EFV56095 Trichinella spiralis EFV56095 N 0.478
D918_06015 Trichuris suis D918_06015 N 0.478
D917_05048 Trichinella nativa D917_05048 N 0.478
EFV56090 Trichinella spiralis EFV56090 N 0.478
CBN07735 Caenorhabditis brenneri CBN07735 N 0.473
CBN31697 Caenorhabditis brenneri CBN31697 N 0.473
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.473
CRE14258 Caenorhabditis remanei CRE14258 N 0.473
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N 0.471
BXY_0575000 Bursaphelenchus xylophilus BXY_0575000 N 0.465
ENSMMUP00000034886 Macaca fascicularis ENSMMUP00000034886 N 0.463
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.461
NBR_0000051501 Nippostrongylus brasiliensis NBR_0000051501 N 0.459
HPBE_0002300401 Heligmosomoides bakeri HPBE_0002300401 N 0.459
EFV52201 Trichinella spiralis EFV52201 N 0.458
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.457
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.457
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.457
PNEG_03347 Pneumocystis murina PNEG_03347 I 0.454
BTMF_0001523401 Brugia timori BTMF_0001523401 N 0.453
EEL_0000724001 Elaeophora elaphi EEL_0000724001 N 0.453
nOo.2.0.1.g03638 Onchocerca ochengi nOo.2.0.1.g03638 N 0.453
Bm9369 Brugia malayi Bm9369 N 0.453
Bm7765 Brugia malayi Bm7765 N 0.453
WUBG_03167 Wuchereria bancrofti WUBG_03167 N 0.453
nAv.1.0.1.g05839 Acanthocheilonema viteae nAv.1.0.1.g05839 N 0.453
LOAG_11340 Loa loa LOAG_11340 N 0.453
WBGene00239172 Onchocerca volvulus WBGene00239172 N 0.453
OFLC_0000194401 Onchocerca flexuosa OFLC_0000194401 N 0.453
nDi.2.2.2.g01867 Dirofilaria immitis nDi.2.2.2.g01867 N 0.453
nLs.2.1.2.g07200 Litomosoides sigmodontis nLs.2.1.2.g07200 N 0.453
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N 0.451
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.450
AFUN005717 Anopheles funestus AFUN005717 N 0.450
Hsal_06265--XP_624018.2_APIME Harpegnathos saltator Hsal_06265--XP_624018.2_APIME N 0.450
AEPI010254 Anopheles epiroticus AEPI010254 N 0.450
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.450
D918_03887 Trichuris suis D918_03887 N 0.450
L798_00437 Zootermopsis nevadensis L798_00437 N 0.450
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.450
TOX2 Sorex araneus ENSSARG00000001080 N 0.450
ENSTGUG00000014902 Taeniopygia guttata ENSTGUG00000014902 N 0.450
AMAM014030 Anopheles maculatus AMAM014030 N 0.450
PHUM393920 Pediculus humanus PHUM393920 N 0.450
AMIN005634 Anopheles minimus AMIN005634 N 0.450
L898_g14011 Steinernema monticolum L898_g14011 N 0.447
CBG11867 Caenorhabditis briggsae CBG11867 N 0.446
BTMF_0001478401 Brugia timori BTMF_0001478401 N 0.443
L889_g13125 Steinernema feltiae L889_g13125 N 0.442
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N 0.439
Minc06622 Meloidogyne incognita Minc06622 N 0.439
ISCW008318 Ixodes scapularis ISCW008318 N 0.438
HPLM_0002008001 Haemonchus placei HPLM_0002008001 N 0.435
pbrm1l Tetraodon nigroviridis ENSTNIG00000014731 N 0.434
pbrm1l Danio rerio ENSDARG00000077038 N 0.434
pbrm1l Takifugu rubripes ENSTRUG00000005335 N 0.434
CJA03316 Caenorhabditis japonica CJA03316 N 0.433
CJA30740 Caenorhabditis japonica CJA30740 N 0.433
LotgiG176647 Lottia gigantea LotgiG176647 N 0.431
TC000618 Tribolium castaneum TC000618 N 0.428
MhA1_Contig1224.frz3.gene1 Meloidogyne hapla MhA1_Contig1224.frz3.gene1 N 0.427
PEQ_0000212901 Parascaris equorum PEQ_0000212901 N 0.425
SMAR010283 Strigamia maritima SMAR010283 N 0.423
ENSAMXG00000016832 Astyanax mexicanus ENSAMXG00000016832 N 0.419
ENSPFOG00000017300 Poecilia formosa ENSPFOG00000017300 N 0.419
ENSXMAG00000016160 Xiphophorus maculatus ENSXMAG00000016160 N 0.419
TCNE_0000652201 Toxocara canis TCNE_0000652201 N 0.418
RSKR_0000607700 Rhabditophanes kr3021 RSKR_0000607700 N 0.418
ALUE_0000699101 Ascaris lumbricoides ALUE_0000699101 N 0.418
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N 0.418
ASU_00726 Ascaris suum ASU_00726 N 0.418
Ocbimv22010533m.g Octopus bimaculoides Ocbimv22010533m.g N 0.415