Sakowv30031460m.g (Saccoglossus kowalevskii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Sakowv30031460m.g T334351_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
23924969_peptide Sox 1513 1579
23924970_peptide Sox 1513 1579
23924971_peptide Sox 1513 1579
23924972_peptide Sox 1438 1504
23924973_peptide Sox 1353 1419
23924974_peptide Sox 1342 1408
23924975_peptide Sox 1144 1210

Links

Other Sox family TFs
Other Saccoglossus kowalevskii TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE28315 Caenorhabditis remanei CRE28315 N 0.517
pbrm1l Danio rerio ENSDARG00000077038 N 0.506
ENSAMXG00000016832 Astyanax mexicanus ENSAMXG00000016832 N 0.500
ENSXMAG00000016160 Xiphophorus maculatus ENSXMAG00000016160 N 0.500
ENSPFOG00000017300 Poecilia formosa ENSPFOG00000017300 N 0.500
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.492
SMAR009325 Strigamia maritima SMAR009325 N 0.482
pbrm1l Takifugu rubripes ENSTRUG00000005335 N 0.481
pbrm1l Tetraodon nigroviridis ENSTNIG00000014731 N 0.481
CBN15844 Caenorhabditis brenneri CBN15844 N 0.481
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.479
fgenesh2_pg.scaffold_1690000001 Branchiostoma floridae fgenesh2_pg.scaffold_1690000001 N 0.478
BXY_0575000 Bursaphelenchus xylophilus BXY_0575000 N 0.477
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.473
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.473
MhA1_Contig1224.frz3.gene1 Meloidogyne hapla MhA1_Contig1224.frz3.gene1 N 0.472
ASU_00939 Ascaris suum ASU_00939 N 0.468
ASIM_0001613301 Anisakis simplex ASIM_0001613301 N 0.468
TCLT_0000189901 Thelazia callipaeda TCLT_0000189901 N 0.468
WBGene00238178 Onchocerca volvulus WBGene00238178 N 0.468
SMUV_0000135001 Syphacia muris SMUV_0000135001 N 0.468
nOo.2.0.1.g07918 Onchocerca ochengi nOo.2.0.1.g07918 N 0.468
nDi.2.2.2.g06671 Dirofilaria immitis nDi.2.2.2.g06671 N 0.468
Bm2393 Brugia malayi Bm2393 N 0.468
nLs.2.1.2.g08566 Litomosoides sigmodontis nLs.2.1.2.g08566 N 0.468
GPUH_0001659301 Gongylonema pulchrum GPUH_0001659301 N 0.468
nDi.2.2.2.g10298 Dirofilaria immitis nDi.2.2.2.g10298 N 0.468
WUBG_00348 Wuchereria bancrofti WUBG_00348 N 0.468
CJA17191 Caenorhabditis japonica CJA17191 N 0.468
LOAG_15875 Loa loa LOAG_15875 N 0.468
EFV56095 Trichinella spiralis EFV56095 N 0.464
D917_05046 Trichinella nativa D917_05046 N 0.464
D917_05048 Trichinella nativa D917_05048 N 0.464
D918_06015 Trichuris suis D918_06015 N 0.464
EFV56090 Trichinella spiralis EFV56090 N 0.464
ISCW005293 Ixodes scapularis ISCW005293 N 0.464
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N 0.464
TMUE_s0089001400 Trichuris muris TMUE_s0089001400 N 0.461
D918_05288 Trichuris suis D918_05288 N 0.461
SVUK_0000686401 Strongylus vulgaris SVUK_0000686401 N 0.459
mgf006762m Mimulus guttatus mgf006762m N 0.457
nDi.2.2.2.g01867 Dirofilaria immitis nDi.2.2.2.g01867 N 0.453
ENSORLG00000001101 Oryzias latipes ENSORLG00000001101 N 0.453
ENSORLG00000019807 Oryzias latipes ENSORLG00000019807 N 0.453
TCM_014800 Theobroma cacao TCM_014800 N 0.451
NECAME_06830 Necator americanus NECAME_06830 N 0.451
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.449
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.444
L892_g13433 Steinernema scapterisci L892_g13433 I 0.444
EFV52201 Trichinella spiralis EFV52201 N 0.443
genemark-nMf.1.1.scaf03789-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf03789-processed-gene-0.2 N 0.441
Minc18174 Meloidogyne incognita Minc18174 N 0.441
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.440
TELCIR_19210 Teladorsagia circumcincta TELCIR_19210 N 0.439
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.439
ENSONIG00000004158 Oreochromis niloticus ENSONIG00000004158 N 0.436
ENSORLG00000018988 Oryzias latipes ENSORLG00000018988 N 0.436
CapteG221993 Capitella teleta CapteG221993 N 0.429
LotgiG176647 Lottia gigantea LotgiG176647 N 0.429
nLs.2.1.2.g07200 Litomosoides sigmodontis nLs.2.1.2.g07200 N 0.426
nAv.1.0.1.g05839 Acanthocheilonema viteae nAv.1.0.1.g05839 N 0.426
Bm9369 Brugia malayi Bm9369 N 0.426
WUBG_03167 Wuchereria bancrofti WUBG_03167 N 0.426
WBGene00239172 Onchocerca volvulus WBGene00239172 N 0.426
LOAG_11340 Loa loa LOAG_11340 N 0.426
EEL_0000724001 Elaeophora elaphi EEL_0000724001 N 0.426
OFLC_0000194401 Onchocerca flexuosa OFLC_0000194401 N 0.426
BTMF_0001523401 Brugia timori BTMF_0001523401 N 0.426
Bm7765 Brugia malayi Bm7765 N 0.426
nOo.2.0.1.g03638 Onchocerca ochengi nOo.2.0.1.g03638 N 0.426
AFUN005717 Anopheles funestus AFUN005717 N 0.423
D918_03887 Trichuris suis D918_03887 N 0.422
CBG18873 Caenorhabditis briggsae CBG18873 N 0.422
BTMF_0001006201 Brugia timori BTMF_0001006201 I 0.422
hmg-6 Caenorhabditis elegans WBGene00009827 N 0.422
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.418
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.417
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.417
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.417
PHUM393920 Pediculus humanus PHUM393920 N 0.416
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.416
AMIN005634 Anopheles minimus AMIN005634 N 0.416
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.416
AMAM014030 Anopheles maculatus AMAM014030 N 0.416
AEPI010254 Anopheles epiroticus AEPI010254 N 0.416
L798_00437 Zootermopsis nevadensis L798_00437 N 0.416