nRc.2.0.1.g42996 (Romanomermis culicivorax)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 nRc.2.0.1.g42996 T336766_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
nRc.2.0.1.t42996-RA Sox 261 329

Links

Other Sox family TFs
Other Romanomermis culicivorax TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g02116 Acanthocheilonema viteae nAv.1.0.1.g02116 N 0.720
Bm4188 Brugia malayi Bm4188 N 0.716
nDi.2.2.2.g11099 Dirofilaria immitis nDi.2.2.2.g11099 N 0.716
WUBG_03914 Wuchereria bancrofti WUBG_03914 N 0.716
EEL_0000223401 Elaeophora elaphi EEL_0000223401 N 0.716
LOAG_18151 Loa loa LOAG_18151 N 0.716
GPUH_0000021901 Gongylonema pulchrum GPUH_0000021901 N 0.710
ACYPI005775 Acyrthosiphon pisum ACYPI005775 I 0.700
WBGene00236865 Onchocerca volvulus WBGene00236865 N 0.697
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N 0.697
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N 0.697
CLEC001918 Cimex lectularius CLEC001918 I 0.696
HHAL000823-PA Halyomorpha halys HHAL000823-PA I 0.696
RPRC000650 Rhodnius prolixus RPRC000650 I 0.696
TTRE_0000401801 Trichuris trichiura TTRE_0000401801 I 0.691
nLs.2.1.2.g04689 Litomosoides sigmodontis nLs.2.1.2.g04689 N 0.691
TMUE_s0011001600 Trichuris muris TMUE_s0011001600 I 0.691
AATE016215 Anopheles atroparvus AATE016215 I 0.689
AALB006415 Anopheles albimanus AALB006415 I 0.689
ACUA004409 Anopheles culicifacies ACUA004409 I 0.689
AARA010616 Anopheles arabiensis AARA010616 I 0.689
AMEC012857 Anopheles melas AMEC012857 I 0.689
AGAP000281 Anopheles gambiae AGAP000281 I 0.689
ADAC003252 Anopheles darlingi ADAC003252 I 0.689
AFAF011136 Anopheles farauti AFAF011136 I 0.689
ASTEI07799 Anopheles stephensi ASTEI07799 I 0.689
ASIS016667 Anopheles sinensis ASIS016667 I 0.689
ISCW018867 Ixodes scapularis ISCW018867 I 0.689
AMEM006878 Anopheles merus AMEM006878 I 0.689
TTRE_0000108401 Trichuris trichiura TTRE_0000108401 N 0.676
TMUE_s0009009400 Trichuris muris TMUE_s0009009400 N 0.676
D918_09264 Trichuris suis D918_09264 N 0.676
LotgiG109021 Lottia gigantea LotgiG109021 I 0.671
CGI_10017717 Crassostrea gigas CGI_10017717 I 0.671
HMEL005034 Heliconius melpomene HMEL005034 I 0.669
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I 0.669
MCINX005468 Melitaea cinxia MCINX005468 I 0.669
TC012723 Tribolium castaneum TC012723 I 0.669
BGIBMGA006848 Bombyx mori BGIBMGA006848 I 0.669
KGM_14572 Danaus plexippus KGM_14572 I 0.669
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N 0.667
tox4a Gasterosteus aculeatus ENSGACG00000014107 I 0.662
NV10488 Nasonia vitripennis NV10488 I 0.662
GB43084 Apis mellifera GB43084 I 0.660
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.656
tox4b Tetraodon nigroviridis ENSTNIG00000003691 N 0.655
tox4b Takifugu rubripes ENSTRUG00000002594 N 0.655
tox4b Oryzias latipes ENSORLG00000008779 N 0.655
ENSONIG00000000284 Oreochromis niloticus ENSONIG00000000284 N 0.655
BTMF_0001006201 Brugia timori BTMF_0001006201 I 0.653
ISCW015985 Ixodes scapularis ISCW015985 N 0.649
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N 0.649
D917_02150 Trichinella nativa D917_02150 N 0.648
EFV61455 Trichinella spiralis EFV61455 N 0.648
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I 0.644
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.639
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.639
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I 0.638
XP_002936155 Xenopus tropicalis XP_002936155 N 0.630
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N 0.630
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N 0.630
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N 0.630
tox2 Gasterosteus aculeatus ENSGACG00000006914 N 0.628
ENSGMOG00000008081 Gadus morhua ENSGMOG00000008081 N 0.628
tox2 Tetraodon nigroviridis ENSTNIG00000005683 N 0.628
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.628
tox2 Oryzias latipes ENSORLG00000004818 N 0.628
ENSXMAG00000016763 Xiphophorus maculatus ENSXMAG00000016763 N 0.628
ENSTGUG00000003811 Taeniopygia guttata ENSTGUG00000003811 N 0.628
ENSPFOG00000008402 Poecilia formosa ENSPFOG00000008402 N 0.628
ENSSSCG00000023554 Sus scrofa ENSSSCG00000023554 N 0.628
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I 0.623
SMU15029818 Schmidtea mediterranea SMU15029818 I 0.622
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N 0.618
ACEP19638 Atta cephalotes ACEP19638 I 0.611
ENSPFOG00000002336 Poecilia formosa ENSPFOG00000002336 N 0.600
TCLT_0000844001 Thelazia callipaeda TCLT_0000844001 N 0.600
HelroG145107 Helobdella robusta HelroG145107 N 0.596
tox4.S Xenopus laevis XB-GENE-993810 I 0.594
tox4b Danio rerio ENSDARG00000100163 I 0.594
ENSGGOG00000025016 Gorilla gorilla ENSGGOG00000025016 I 0.594
ASIM_0001958001 Anisakis simplex ASIM_0001958001 N 0.572
ENSMMUG00000014077 Macaca mulatta ENSMMUG00000014077 N 0.567
LCUP006200 Lucilia cuprina LCUP006200 N 0.566
MDOA008605 Musca domestica MDOA008605 N 0.556
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N 0.505
L798_00437 Zootermopsis nevadensis L798_00437 N 0.502
AEPI010254 Anopheles epiroticus AEPI010254 N 0.495
D918_03887 Trichuris suis D918_03887 N 0.495
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.495
AMIN005634 Anopheles minimus AMIN005634 N 0.495
AMAM014030 Anopheles maculatus AMAM014030 N 0.495
EFV52201 Trichinella spiralis EFV52201 N 0.495
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.495
AFUN005717 Anopheles funestus AFUN005717 N 0.493
TTHERM_00216040 Tetrahymena thermophila TTHERM_00216040 N 0.492
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.488
RO3G_05222 Rhizopus oryzae RO3G_05222 N 0.476
ALUE_0000699101 Ascaris lumbricoides ALUE_0000699101 N 0.474
ASU_00726 Ascaris suum ASU_00726 N 0.474
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.473
TCNE_0000652201 Toxocara canis TCNE_0000652201 N 0.468
ENSMMUP00000034886 Macaca fascicularis ENSMMUP00000034886 N 0.468
RO3G_07013 Rhizopus oryzae RO3G_07013 I 0.466
ENSTGUG00000014902 Taeniopygia guttata ENSTGUG00000014902 N 0.461
TOX2 Sorex araneus ENSSARG00000001080 N 0.461
Hsal_06265--XP_624018.2_APIME Harpegnathos saltator Hsal_06265--XP_624018.2_APIME N 0.461
ENSAPLG00000003986 Anas platyrhynchos ENSAPLG00000003986 N 0.458
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.458
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.458
estExt_fgeneshMC_pg.C_20910 Mucor circinelloides estExt_fgeneshMC_pg.C_20910 I 0.453
Hmgb1 Rattus norvegicus ENSRNOG00000029813 N 0.449
fgeneshMC_pg.3_#_1190 Mucor circinelloides fgeneshMC_pg.3_#_1190 I 0.446
MESCA003479 Megaselia scalaris MESCA003479 N 0.443
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.442
SNAPOd2T00025636001 Oikopleura dioica SNAPOd2T00025636001 N 0.441
PHUM393920 Pediculus humanus PHUM393920 N 0.440
EDI_340970 Entamoeba dispar EDI_340970 N 0.438
nRc.2.0.1.g36724 Romanomermis culicivorax nRc.2.0.1.g36724 N 0.436
RO3G_16060 Rhizopus oryzae RO3G_16060 I 0.431
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N 0.428
L892_g13433 Steinernema scapterisci L892_g13433 I 0.426
NECAME_01599 Necator americanus NECAME_01599 N 0.424
ANCDUO_06783 Ancylostoma duodenale ANCDUO_06783 N 0.424
TELCIR_16246 Teladorsagia circumcincta TELCIR_16246 N 0.424
OESDEN_01314 Oesophagostomum dentatum OESDEN_01314 N 0.424
SVUK_0000363901 Strongylus vulgaris SVUK_0000363901 N 0.424
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N 0.424
ACAC_0000973801 Angiostrongylus cantonensis ACAC_0000973801 N 0.424
ANCCEY_15064 Ancylostoma ceylanicum ANCCEY_15064 N 0.424
ANCCEY_15918 Ancylostoma ceylanicum ANCCEY_15918 N 0.424
DICVIV_00270 Dictyocaulus viviparus DICVIV_00270 N 0.424
HCOI00076900 Haemonchus contortus HCOI00076900 N 0.424
ANCCAN_09463 Ancylostoma caninum ANCCAN_09463 N 0.424
HCOI01215700 Haemonchus contortus HCOI01215700 N 0.424
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.423
CJA03316 Caenorhabditis japonica CJA03316 N 0.422
CBN31697 Caenorhabditis brenneri CBN31697 N 0.422
CBG11867 Caenorhabditis briggsae CBG11867 N 0.422
CBN07735 Caenorhabditis brenneri CBN07735 N 0.422
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.422
CRE14258 Caenorhabditis remanei CRE14258 N 0.422
CJA30740 Caenorhabditis japonica CJA30740 N 0.422
Myotis_brandtii_DAP3_10031965 Myotis brandtii Myotis_brandtii_DAP3_10031965 N 0.421
fgeneshMC_pg.1_#_1771 Mucor circinelloides fgeneshMC_pg.1_#_1771 I 0.419
RO3G_15755 Rhizopus oryzae RO3G_15755 I 0.418
nRc.2.0.1.g21669 Romanomermis culicivorax nRc.2.0.1.g21669 N 0.416
L889_g13125 Steinernema feltiae L889_g13125 N 0.415