Ocbimv22006454m.g (Octopus bimaculoides)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Ocbimv22006454m.g T334309_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22006454m.p Sox 574 640

Links

Other Sox family TFs
Other Octopus bimaculoides TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I 0.531
BGLB002303 Biomphalaria glabrata BGLB002303 N 0.511
LotgiG207546 Lottia gigantea LotgiG207546 N 0.495
ISCW020032 Ixodes scapularis ISCW020032 N 0.487
CGI_10024258 Crassostrea gigas CGI_10024258 N 0.485
ssrp1a Danio rerio ENSDARG00000037397 I 0.484
ENSCSAVG00000011755 Ciona savignyi ENSCSAVG00000011755 N 0.467
ENSAMXG00000014826 Astyanax mexicanus ENSAMXG00000014826 N 0.459
TTHERM_00257230 Tetrahymena thermophila TTHERM_00257230 N 0.455
tetur01g10640 Tetranychus urticae tetur01g10640 N 0.453
ASU_05752 Ascaris suum ASU_05752 N 0.449
ALUE_0000448701 Ascaris lumbricoides ALUE_0000448701 N 0.449
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.446
ASU_07820 Ascaris suum ASU_07820 N 0.443
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N 0.443
SPU_023988 Strongylocentrotus purpuratus SPU_023988 N 0.442
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.439
CLEC003860 Cimex lectularius CLEC003860 I 0.439
SMAR015352 Strigamia maritima SMAR015352 N 0.438
CapteG172235 Capitella teleta CapteG172235 I 0.434
Minc03634 Meloidogyne incognita Minc03634 N 0.430
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.430
Minc04648 Meloidogyne incognita Minc04648 N 0.430
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.430
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.429
ENSCING00000000505 Ciona intestinalis ENSCING00000000505 I 0.421
ASIM_0000156001 Anisakis simplex ASIM_0000156001 N 0.421
RPRC006380 Rhodnius prolixus RPRC006380 I 0.419
EV44_g2383 Erysiphe necator EV44_g2383 I 0.417
RSKR_0000269500 Rhabditophanes kr3021 RSKR_0000269500 N 0.415