CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSXMAG00000008530
(
Xiphophorus maculatus
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSXMAG00000008530
T340616_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbx5
M00833_2.00
Mus musculus
AGGTGTBA
TVACACCT
PBM
Weirauch et al.(2013)
pTH3775
0.750
0.613
TBX5
M03552_2.00
Homo sapiens
AGGTGTBA
TVACACCT
SELEX
Jolma et al.(2013)
TBX5_1
0.750
0.613
TBX5
M03553_2.00
Homo sapiens
AGGTGTKANWWNTVACACCT
AGGTGTBANWWNTMACACCT
SELEX
Jolma et al.(2013)
TBX5_2
0.750
0.613
Tbx5
M09649_2.00
Mus musculus
AGGTGHBA
TVDCACCT
Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529
0.750
0.613
TBX5
M11374_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_01
0.750
0.613
TBX5
M11375_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_02
0.750
0.613
Tbx5
M11387_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_05
0.750
0.613
TBX5
M11376_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q2
0.750
0.613
TBX5
M11377_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q5
0.750
0.613
estExt_fgenesh2_pg.C_1570024
M01030_2.00
Branchiostoma floridae
NHNDCACNHN
NDNGTGHNDN
PBM
SebePedros et al.(2013)
pTH9244
0.739
0.669
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000008557
T-box
33
213
MTLEDLELWKTFHEIGTEMIITKPGRRMFPHCKVNLSGLIQCAKYILLVDMVPEDGFRYKWNKEKWEVAGKAEPQPPCRTYLHPDSPALGSHWMKQSISFLKLKLTNNTLDQHGHIILHSMHRYHPRFHVVQADDLFSVRWSVFQTFTFPETSFTAVTAYQNTKITKLKINHNPFAKGFRD
Links
Other
T-box
family TFs
Other
Xiphophorus maculatus
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPFOG00000017869
Poecilia formosa
ENSPFOG00000017869
I
0.909
tbx16
Oryzias latipes
ENSORLG00000014344
I
0.886
tbx16
Gasterosteus aculeatus
ENSGACG00000012454
I
0.869
ENSONIG00000011030
Oreochromis niloticus
ENSONIG00000011030
I
0.862
tbx16
Danio rerio
ENSDARG00000007329
I
0.848
ENSLOCG00000006550
Lepisosteus oculatus
ENSLOCG00000006550
I
0.844
ENSAMXG00000001195
Astyanax mexicanus
ENSAMXG00000001195
I
0.841
tbx16
Tetraodon nigroviridis
ENSTNIG00000011487
N
0.840
tbx16
Takifugu rubripes
ENSTRUG00000016468
I
0.838
BAH04511
Xenopus tropicalis
BAH04511
I
0.808
BAH04512
Xenopus tropicalis
BAH04512
I
0.808
vegt
Xenopus tropicalis
XB-GENE-1033829
I
0.808
vegt.S
Xenopus laevis
XB-GENE-1033836
N
0.808
vegt.L
Xenopus laevis
XB-GENE-6252142
N
0.792
ENSONIG00000003732
Oreochromis niloticus
ENSONIG00000003732
I
0.779
ENSLACG00000012884
Latimeria chalumnae
ENSLACG00000012884
I
0.775
D917_09589
Trichinella nativa
D917_09589
I
0.755
EFV62265
Trichinella spiralis
EFV62265
I
0.755
HelroG71638
Helobdella robusta
HelroG71638
I
0.753
ENSGMOG00000009107
Gadus morhua
ENSGMOG00000009107
I
0.752
Tbx5
Mus musculus
ENSMUSG00000018263
D
0.750
TBX5
Myotis lucifugus
ENSMLUG00000016530
I
0.750
TBX5
Meleagris gallopavo
ENSMGAG00000010075
I
0.750
ENSBTAP00000015125-D1
Bos grunniens
ENSBTAP00000015125-D1
I
0.750
TBX5
Macaca mulatta
ENSMMUG00000016202
I
0.750
ENSMPUG00000002715
Mustela putorius furo
ENSMPUG00000002715
I
0.750
Cmyd_10018097
Chelonia mydas
Cmyd_10018097
I
0.750
ENSPFOG00000019824
Poecilia formosa
ENSPFOG00000019824
I
0.750
ENSPANG00000016891
Papio anubis
ENSPANG00000016891
I
0.750
ENSPPYG00000004994
Pongo abelii
ENSPPYG00000004994
I
0.750
TBX5
Pan troglodytes
ENSPTRG00000005496
I
0.750
TBX5
Sus scrofa
ENSSSCG00000009867
I
0.750
Tbx5
Rattus norvegicus
ENSRNOG00000001399
I
0.750
TBX5
Tursiops truncatus
ENSTTRG00000000980
I
0.750
tbx5a
Oryzias latipes
ENSORLG00000007339
I
0.750
TBX5
Otolemur garnettii
ENSOGAG00000016204
I
0.750
TBX5
Oryctolagus cuniculus
ENSOCUG00000012715
I
0.750
ENSXMAG00000005348
Xiphophorus maculatus
ENSXMAG00000005348
I
0.750
ENSP00000384152
Macaca fascicularis
ENSP00000384152
I
0.750
Alligator_sinensis_CCG008096.1
Alligator sinensis
Alligator_sinensis_CCG008096.1
I
0.750
ENSOARG00000006614
Ovis aries
ENSOARG00000006614
I
0.750
ENSLACG00000002339
Latimeria chalumnae
ENSLACG00000002339
I
0.750
ENSCSAG00000002347
Chlorocebus sabaeus
ENSCSAG00000002347
I
0.750
Myotis_brandtii_TBX5_10028219
Myotis brandtii
Myotis_brandtii_TBX5_10028219
I
0.750
TBX5
Dasypus novemcinctus
ENSDNOG00000025303
I
0.750
TBX5
Equus caballus
ENSECAG00000017114
I
0.750
TBX5
Cavia porcellus
ENSCPOG00000014558
I
0.750
TBX5
Callithrix jacchus
ENSCJAG00000009744
I
0.750
ENSAMEG00000001112
Ailuropoda melanoleuca
ENSAMEG00000001112
I
0.750
TBX5
Bos taurus
ENSBTAG00000011384
I
0.750
TBX5
Canis familiaris
ENSCAFG00000009189
I
0.750
ENSFALG00000007778
Ficedula albicollis
ENSFALG00000007778
I
0.750
tbx5a
Danio rerio
ENSDARG00000024894
I
0.750
TBX5
Gorilla gorilla
ENSGGOG00000013775
I
0.750
Ogr05323
Ophisaurus gracilis
Ogr05323
I
0.750
ENSGMOG00000011740
Gadus morhua
ENSGMOG00000011740
I
0.750
TBX5
Gallus gallus
ENSGALG00000008253
I
0.750
TBX5
Loxodonta africana
ENSLAFG00000010125
I
0.750
TBX5
Homo sapiens
ENSG00000089225
D
0.750
TBX5
Felis catus
ENSFCAG00000005574
I
0.750
LotgiG117236
Lottia gigantea
LotgiG117236
I
0.749
ML45844a
Mnemiopsis leidyi
ML45844a
I
0.749
Cmyd_10005826
Chelonia mydas
Cmyd_10005826
I
0.746
D918_00588
Trichuris suis
D918_00588
I
0.746
TMUE_s0121001900
Trichuris muris
TMUE_s0121001900
I
0.746
csin107221
Clonorchis sinensis
csin107221
I
0.746
TBX3
Monodelphis domestica
ENSMODG00000012059
I
0.746
TTRE_0000604401
Trichuris trichiura
TTRE_0000604401
I
0.746
T265_05725
Opisthorchis viverrini
T265_05725
I
0.746
TBX5
Monodelphis domestica
ENSMODG00000012045
I
0.745
ENSGMOG00000012645
Gadus morhua
ENSGMOG00000012645
I
0.744
CapteG110717
Capitella teleta
CapteG110717
I
0.744
CGI_10016324
Crassostrea gigas
CGI_10016324
I
0.743
tbx5.L
Xenopus laevis
XB-GENE-865653
I
0.742
tbx5
Xenopus tropicalis
XB-GENE-486855
I
0.742
tbx5
Oryzias latipes
ENSORLG00000008185
I
0.742
ENSPFOG00000016001
Poecilia formosa
ENSPFOG00000016001
I
0.742
ENSLOCG00000007616
Lepisosteus oculatus
ENSLOCG00000007616
I
0.742
ENSACAG00000008612
Anolis carolinensis
ENSACAG00000008612
N
0.742
ENSAMXG00000009196
Astyanax mexicanus
ENSAMXG00000009196
I
0.742
ENSONIG00000013614
Oreochromis niloticus
ENSONIG00000013614
I
0.742
ENSGMOG00000011095
Gadus morhua
ENSGMOG00000011095
N
0.741
TBX2
Taeniopygia guttata
ENSTGUG00000007813
I
0.740
tbx2.S
Xenopus laevis
XB-GENE-6255176
I
0.739
tbx3a
Gasterosteus aculeatus
ENSGACG00000016783
I
0.739
tbx3a
Danio rerio
ENSDARG00000002216
I
0.739
Ocbimv22029974m.g
Octopus bimaculoides
Ocbimv22029974m.g
I
0.739
estExt_fgenesh2_pg.C_1570024
Branchiostoma floridae
estExt_fgenesh2_pg.C_1570024
D
0.739
estExt_fgenesh2_pg.C_1570035
Branchiostoma floridae
estExt_fgenesh2_pg.C_1570035
I
0.739
ENSGMOG00000011728
Gadus morhua
ENSGMOG00000011728
I
0.739
ENSONIG00000000187
Oreochromis niloticus
ENSONIG00000000187
I
0.739
CGI_10005914
Crassostrea gigas
CGI_10005914
I
0.739
tbx3a
Tetraodon nigroviridis
ENSTNIG00000009035
I
0.739
tbx3a
Takifugu rubripes
ENSTRUG00000015097
I
0.739
ENSPFOG00000024759
Poecilia formosa
ENSPFOG00000024759
I
0.739
ENSXMAG00000005372
Xiphophorus maculatus
ENSXMAG00000005372
I
0.739
ENSAMXG00000009197
Astyanax mexicanus
ENSAMXG00000009197
I
0.739
tbx3a
Oryzias latipes
ENSORLG00000007316
I
0.739
AAI69776
Xenopus laevis
AAI69776
I
0.738
BAC20262
Xenopus laevis
BAC20262
I
0.738
tbx6
Xenopus tropicalis
XB-GENE-6257419
I
0.738
ABC75836
Xenopus laevis
ABC75836
I
0.738
tbx2.L
Xenopus laevis
XB-GENE-1018122
I
0.738
tbx5a
Gasterosteus aculeatus
ENSGACG00000016787
I
0.737
tbx5a
Takifugu rubripes
ENSTRUG00000015054
I
0.737
Alligator_sinensis_CCG014169.1
Alligator sinensis
Alligator_sinensis_CCG014169.1
N
0.737
tbx5a
Tetraodon nigroviridis
ENSTNIG00000009036
I
0.737
ENSAPLG00000006398
Anas platyrhynchos
ENSAPLG00000006398
I
0.736
ENSFALG00000007252
Ficedula albicollis
ENSFALG00000007252
I
0.736
Tal_R011807
Tyto alba
Tal_R011807
I
0.736
ENSMICG00000008299
Microcebus murinus
ENSMICG00000008299
I
0.736
Brh_R011905
Buceros rhinoceros
Brh_R011905
I
0.736
Afo_R009018
Aptenodytes forsteri
Afo_R009018
I
0.736
TBX6
Gallus gallus
ENSGALG00000006374
I
0.736
TBX6
Taeniopygia guttata
ENSTGUG00000010188
I
0.736
Gfo_R010838
Geospiza fortis
Gfo_R010838
I
0.736
Gfo_R008747
Geospiza fortis
Gfo_R008747
I
0.736
TBX6
Meleagris gallopavo
ENSMGAG00000007663
I
0.736
Aan_R008261
Calypte anna
Aan_R008261
I
0.736
ENSCING00000008678
Ciona intestinalis
ENSCING00000008678
I
0.735
ENSCSAVG00000009650
Ciona savignyi
ENSCSAVG00000009650
I
0.735