CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_03730
(
Pogona vitticeps
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
Pvit_03730
T341141_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbx4
M00831_2.00
Mus musculus
AGGTGTBA
TVACACCT
PBM
Weirauch et al.(2013)
pTH3973
0.749
0.626
TBX4
M03558_2.00
Homo sapiens
AGGTGTBA
TVACACCT
SELEX
Jolma et al.(2013)
TBX4_1
0.749
0.626
TBX4
M03559_2.00
Homo sapiens
AGGTGTBANWWNTVACACBT
AVGTGTBANWWNTVACACCT
SELEX
Jolma et al.(2013)
TBX4_2
0.749
0.626
Tbx5
M00833_2.00
Mus musculus
AGGTGTBA
TVACACCT
PBM
Weirauch et al.(2013)
pTH3775
0.737
0.643
TBX5
M03552_2.00
Homo sapiens
AGGTGTBA
TVACACCT
SELEX
Jolma et al.(2013)
TBX5_1
0.737
0.643
TBX5
M03553_2.00
Homo sapiens
AGGTGTKANWWNTVACACCT
AGGTGTBANWWNTMACACCT
SELEX
Jolma et al.(2013)
TBX5_2
0.737
0.643
Tbx5
M09649_2.00
Mus musculus
AGGTGHBA
TVDCACCT
Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529
0.737
0.643
TBX5
M11374_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_01
0.737
0.643
TBX5
M11375_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_02
0.737
0.643
Tbx5
M11387_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_05
0.737
0.643
TBX5
M11376_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q2
0.737
0.643
TBX5
M11377_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q5
0.737
0.643
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_03730
T-box
24
206
VTLEDRELWAKFHQVGTEMIITKSGRWMFPQCKIKVTGLLPGAKYLLLVDFVPLDNFRYKWNKDKWEIAGKAEPRPPCRTYVHPDSPAPGSHWMKETVSFQKLKLTNNTLDQQGHVILHSMHRYKPRFHILQAEELFGPAGGWSAFHTFSFPETAFTSVTAYQNKEVTKLKIYNNPFAKGFRE
Links
Other
T-box
family TFs
Other
Pogona vitticeps
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSACAG00000008612
Anolis carolinensis
ENSACAG00000008612
N
0.858
Tal_R011807
Tyto alba
Tal_R011807
I
0.827
Gfo_R008747
Geospiza fortis
Gfo_R008747
I
0.827
Afo_R009018
Aptenodytes forsteri
Afo_R009018
I
0.827
Brh_R011905
Buceros rhinoceros
Brh_R011905
I
0.827
Aan_R008261
Calypte anna
Aan_R008261
I
0.827
ENSAPLG00000006398
Anas platyrhynchos
ENSAPLG00000006398
I
0.827
TBX6
Gallus gallus
ENSGALG00000006374
I
0.827
TBX6
Meleagris gallopavo
ENSMGAG00000007663
I
0.827
ENSFALG00000007252
Ficedula albicollis
ENSFALG00000007252
I
0.827
TBX6
Taeniopygia guttata
ENSTGUG00000010188
I
0.827
Cmyd_10005826
Chelonia mydas
Cmyd_10005826
I
0.779
Alligator_sinensis_CCG014169.1
Alligator sinensis
Alligator_sinensis_CCG014169.1
N
0.774
vegt.L
Xenopus laevis
XB-GENE-6252142
N
0.766
Cmyd_10016208
Chelonia mydas
Cmyd_10016208
I
0.759
ENSPSIG00000017594
Pelodiscus sinensis
ENSPSIG00000017594
I
0.759
ENSAMXG00000001195
Astyanax mexicanus
ENSAMXG00000001195
I
0.758
tbx16
Danio rerio
ENSDARG00000007329
I
0.752
ENSLACG00000012884
Latimeria chalumnae
ENSLACG00000012884
I
0.752
vegt
Xenopus tropicalis
XB-GENE-1033829
I
0.750
BAH04512
Xenopus tropicalis
BAH04512
I
0.750
BAH04511
Xenopus tropicalis
BAH04511
I
0.750
TBX4
Otolemur garnettii
ENSOGAG00000007474
I
0.749
TBX4
Ochotona princeps
ENSOPRG00000012257
I
0.749
TBX4
Myotis lucifugus
ENSMLUG00000011682
I
0.749
TBX4
Oryctolagus cuniculus
ENSOCUG00000010834
I
0.749
TBX4
Macaca mulatta
ENSMMUG00000022580
I
0.749
ENSMPUG00000015166
Mustela putorius furo
ENSMPUG00000015166
I
0.749
TBX4
Microcebus murinus
ENSMICG00000016673
I
0.749
ENSNLEG00000000427
Nomascus leucogenys
ENSNLEG00000000427
I
0.749
TBX4
Ornithorhynchus anatinus
ENSOANG00000011525
I
0.749
ENSSTOG00000009394
Ictidomys tridecemlineatus
ENSSTOG00000009394
I
0.749
Alligator_sinensis_CCG002049.1
Alligator sinensis
Alligator_sinensis_CCG002049.1
I
0.749
TBX4
Tursiops truncatus
ENSTTRG00000004552
I
0.749
ENSP00000377435-D1
Bos grunniens
ENSP00000377435-D1
I
0.749
ENSP00000377435
Macaca fascicularis
ENSP00000377435
I
0.749
vegt.S
Xenopus laevis
XB-GENE-1033836
N
0.749
TBX4
Meleagris gallopavo
ENSMGAG00000007617
I
0.749
TBX4
Sus scrofa
ENSSSCG00000022980
I
0.749
TBX4
Pan troglodytes
ENSPTRG00000009491
I
0.749
ENSPPYG00000008800
Pongo abelii
ENSPPYG00000008800
I
0.749
TBX4
Pteropus vampyrus
ENSPVAG00000016866
I
0.749
Tbx4
Rattus norvegicus
ENSRNOG00000003544
I
0.749
ENSSHAG00000012638
Sarcophilus harrisii
ENSSHAG00000012638
I
0.749
ENSPANG00000022155
Papio anubis
ENSPANG00000022155
I
0.749
Tbx4
Mus musculus
ENSMUSG00000000094
D
0.749
TBX4
Dasypus novemcinctus
ENSDNOG00000035197
I
0.749
tbx4
Danio rerio
ENSDARG00000030058
I
0.749
TBX4
Equus caballus
ENSECAG00000024414
I
0.749
TBX4
Erinaceus europaeus
ENSEEUG00000009722
I
0.749
TBX4
Felis catus
ENSFCAG00000026664
I
0.749
ENSCPOG00000001044
Cavia porcellus
ENSCPOG00000001044
I
0.749
TBX4
Callithrix jacchus
ENSCJAG00000001281
I
0.749
ENSAMEG00000008802
Ailuropoda melanoleuca
ENSAMEG00000008802
I
0.749
ENSAPLG00000008848
Anas platyrhynchos
ENSAPLG00000008848
I
0.749
TBX4
Bos taurus
ENSBTAG00000009968
I
0.749
TBX4
Canis familiaris
ENSCAFG00000017740
I
0.749
TBX4
Homo sapiens
ENSG00000121075
D
0.749
ENSFALG00000005474
Ficedula albicollis
ENSFALG00000005474
I
0.749
TBX4
Gorilla gorilla
ENSGGOG00000013904
I
0.749
ENSLACG00000014713
Latimeria chalumnae
ENSLACG00000014713
I
0.749
TBX4
Loxodonta africana
ENSLAFG00000006608
I
0.749
ENSGMOG00000002867
Gadus morhua
ENSGMOG00000002867
I
0.744
ENSLOCG00000005064
Lepisosteus oculatus
ENSLOCG00000005064
I
0.744
tbx4
Gasterosteus aculeatus
ENSGACG00000013565
I
0.744
tbx4
Tetraodon nigroviridis
ENSTNIG00000014394
I
0.742
tbx16
Gasterosteus aculeatus
ENSGACG00000012454
I
0.742
tbx4
Takifugu rubripes
ENSTRUG00000008071
I
0.742
ENSONIG00000010459
Oreochromis niloticus
ENSONIG00000010459
I
0.742
tbx4
Xenopus tropicalis
XB-GENE-951382
I
0.741
Cmyd_10018097
Chelonia mydas
Cmyd_10018097
I
0.737
ENSBTAP00000015125-D1
Bos grunniens
ENSBTAP00000015125-D1
I
0.737
TBX5
Macaca mulatta
ENSMMUG00000016202
I
0.737
TBX5
Myotis lucifugus
ENSMLUG00000016530
I
0.737
TBX5
Callithrix jacchus
ENSCJAG00000009744
I
0.737
TBX5
Oryctolagus cuniculus
ENSOCUG00000012715
I
0.737
Alligator_sinensis_CCG008096.1
Alligator sinensis
Alligator_sinensis_CCG008096.1
I
0.737
ENSCSAG00000002347
Chlorocebus sabaeus
ENSCSAG00000002347
I
0.737
TBX5
Cavia porcellus
ENSCPOG00000014558
I
0.737
ENSP00000384152
Macaca fascicularis
ENSP00000384152
I
0.737
Myotis_brandtii_TBX5_10028219
Myotis brandtii
Myotis_brandtii_TBX5_10028219
I
0.737
ENSAMXG00000007100
Astyanax mexicanus
ENSAMXG00000007100
I
0.737
TBX5
Meleagris gallopavo
ENSMGAG00000010075
I
0.737
ENSAMEG00000001112
Ailuropoda melanoleuca
ENSAMEG00000001112
I
0.737
TBX5
Loxodonta africana
ENSLAFG00000010125
I
0.737
TBX5
Gorilla gorilla
ENSGGOG00000013775
I
0.737
tbx5a
Danio rerio
ENSDARG00000024894
I
0.737
Ogr05323
Ophisaurus gracilis
Ogr05323
I
0.737
TBX5
Bos taurus
ENSBTAG00000011384
I
0.737
TBX5
Canis familiaris
ENSCAFG00000009189
I
0.737
ENSMPUG00000002715
Mustela putorius furo
ENSMPUG00000002715
I
0.737
TBX5
Felis catus
ENSFCAG00000005574
I
0.737
Tbx5
Rattus norvegicus
ENSRNOG00000001399
I
0.737
ENSFALG00000007778
Ficedula albicollis
ENSFALG00000007778
I
0.737
TBX5
Otolemur garnettii
ENSOGAG00000016204
I
0.737
TBX5
Pan troglodytes
ENSPTRG00000005496
I
0.737
TBX5
Homo sapiens
ENSG00000089225
D
0.737
ENSPFOG00000019824
Poecilia formosa
ENSPFOG00000019824
I
0.737
ENSPPYG00000004994
Pongo abelii
ENSPPYG00000004994
I
0.737
tbx5a
Oryzias latipes
ENSORLG00000007339
I
0.737
TBX5
Sus scrofa
ENSSSCG00000009867
I
0.737
Tbx5
Mus musculus
ENSMUSG00000018263
D
0.737
ENSLACG00000002339
Latimeria chalumnae
ENSLACG00000002339
I
0.737
ENSXMAG00000005348
Xiphophorus maculatus
ENSXMAG00000005348
I
0.737
TBX5
Dasypus novemcinctus
ENSDNOG00000025303
I
0.737
TBX5
Tursiops truncatus
ENSTTRG00000000980
I
0.737
ENSOARG00000006614
Ovis aries
ENSOARG00000006614
I
0.737
ENSGMOG00000011740
Gadus morhua
ENSGMOG00000011740
I
0.737
TBX5
Equus caballus
ENSECAG00000017114
I
0.737
TBX5
Gallus gallus
ENSGALG00000008253
I
0.737
ENSPANG00000016891
Papio anubis
ENSPANG00000016891
I
0.737