OBART02G32460 (Oryza barthii)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 OBART02G32460 T344067_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.876 0.520
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.868 0.507
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.855 0.467
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.855 0.467
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.842 0.520
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.835 0.520
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART02G32460.1 TCP 31 123

Links

Other TCP family TFs
Other Oryza barthii TFs

243 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI02G31110 Oryza meridionalis OMERI02G31110 I 0.905
mgf021685m Mimulus guttatus mgf021685m I 0.901
Sb08g021690 Sorghum bicolor Sb08g021690 I 0.898
ONIVA12G17870 Oryza nivara ONIVA12G17870 I 0.897
OMERI12G13760 Oryza meridionalis OMERI12G13760 I 0.897
PCF8 Oryza indica BGIOSGA037799 I 0.897
ORGLA12G0161900 Oryza glaberrima ORGLA12G0161900 I 0.897
OGLUM12G20570 Oryza glumaepatula OGLUM12G20570 I 0.897
ONIVA06G04550 Oryza nivara ONIVA06G04550 N 0.893
OBART12G00580 Oryza barthii OBART12G00580 I 0.892
Sb03g035350 Sorghum bicolor Sb03g035350 I 0.892
OPUNC12G17090 Oryza punctata OPUNC12G17090 I 0.891
Pavir.Ea02793 Panicum virgatum Pavir.Ea02793 I 0.891
LPERR12G15920 Leersia perrieri LPERR12G15920 I 0.891
SELMODRAFT_7330 Selaginella moellendorffii SELMODRAFT_7330 I 0.890
BGIOSGA009051 Oryza indica BGIOSGA009051 N 0.889
BRADI4G01547 Brachypodium distachyon BRADI4G01547 I 0.883
GRMZM2G180568 Zea mays GRMZM2G180568 I 0.882
Thhalv10014467m.g Eutrema salsugineum Thhalv10014467m.g I 0.882
OGLUM12G00790 Oryza glumaepatula OGLUM12G00790 I 0.880
GSMUA_Achr10G01020_001 Musa acuminata GSMUA_Achr10G01020_001 I 0.880
Pavir.J37910 Panicum virgatum Pavir.J37910 I 0.879
BRADI2G20060 Brachypodium distachyon BRADI2G20060 I 0.878
Si022833m.g Setaria italica Si022833m.g I 0.877
Pavir.J15913 Panicum virgatum Pavir.J15913 I 0.877
MLOC_72581 Hordeum vulgare MLOC_72581 I 0.876
Traes_5BS_77558D2A3 Triticum aestivum Traes_5BS_77558D2A3 I 0.876
LjT20A21.20.nc Lotus japonicus LjT20A21.20.nc D 0.876
Traes_5DS_643EDFE5B Triticum aestivum Traes_5DS_643EDFE5B I 0.876
Pavir.Cb00038 Panicum virgatum Pavir.Cb00038 I 0.876
Si022811m.g Setaria italica Si022811m.g I 0.874
SELMODRAFT_104521 Selaginella moellendorffii SELMODRAFT_104521 I 0.874
OMERI01G07200 Oryza meridionalis OMERI01G07200 I 0.874
SELMODRAFT_89227 Selaginella moellendorffii SELMODRAFT_89227 I 0.874
Pavir.Ca02949 Panicum virgatum Pavir.Ca02949 I 0.874
SELMODRAFT_29162 Selaginella moellendorffii SELMODRAFT_29162 I 0.874
Si002496m.g Setaria italica Si002496m.g I 0.874
SELMODRAFT_28794 Selaginella moellendorffii SELMODRAFT_28794 I 0.873
MDP0000199422 Malus domestica MDP0000199422 I 0.873
ORUFI12G21090 Oryza rufipogon ORUFI12G21090 I 0.873
MDP0000130524 Malus domestica MDP0000130524 I 0.873
MDP0000253526 Malus domestica MDP0000253526 I 0.873
MDP0000373350 Malus domestica MDP0000373350 I 0.873
MDP0000617746 Malus domestica MDP0000617746 I 0.873
OGLUM01G36040 Oryza glumaepatula OGLUM01G36040 I 0.871
SELMODRAFT_29160 Selaginella moellendorffii SELMODRAFT_29160 I 0.871
TRAES3BF002700090CFD_g Triticum aestivum TRAES3BF002700090CFD_g I 0.870
ORUFI12G00880 Oryza rufipogon ORUFI12G00880 I 0.869
PK10344.1 Cannabis sativa PK10344.1 D 0.868
GRMZM2G035944 Zea mays GRMZM2G035944 I 0.866
GSMUA_Achr7G01160_001 Musa acuminata GSMUA_Achr7G01160_001 I 0.866
GRMZM2G120151 Zea mays GRMZM2G120151 I 0.866
LPERR03G30870 Leersia perrieri LPERR03G30870 I 0.865
GRMZM2G020805 Zea mays GRMZM2G020805 I 0.865
BRADI2G06890 Brachypodium distachyon BRADI2G06890 I 0.864
ONIVA11G00470 Oryza nivara ONIVA11G00470 I 0.864
GLYMA13G34690 Glycine max GLYMA13G34690 I 0.864
Aquca_057_00119 Aquilegia coerulea Aquca_057_00119 I 0.864
BGIOSGA034630 Oryza indica BGIOSGA034630 I 0.864
GSMUA_Achr4G32850_001 Musa acuminata GSMUA_Achr4G32850_001 I 0.864
Gorai.009G153900 Gossypium raimondii Gorai.009G153900 I 0.863
MDP0000202241 Malus domestica MDP0000202241 I 0.861
Pavir.Ba03864 Panicum virgatum Pavir.Ba03864 I 0.860
OMERI07G02020 Oryza meridionalis OMERI07G02020 I 0.860
Si004564m.g Setaria italica Si004564m.g I 0.860
Bostr.13129s0160 Boechera stricta Bostr.13129s0160 I 0.860
Bo1g019520 Brassica oleracea Bo1g019520 I 0.858
Bostr.24513s0122 Boechera stricta Bostr.24513s0122 I 0.858
TCP10 Arabidopsis thaliana AT2G31070 I 0.858
F775_07590 Aegilops tauschii F775_07590 I 0.857
GSMUA_Achr5G02530_001 Musa acuminata GSMUA_Achr5G02530_001 I 0.856
GSMUA_Achr2G12990_001 Musa acuminata GSMUA_Achr2G12990_001 I 0.856
mgf024988m Mimulus guttatus mgf024988m I 0.856
TCP2 Arabidopsis lyrata fgenesh2_kg.7__2455__AT4G18390.1 D 0.855
Thhalv10025465m.g Eutrema salsugineum Thhalv10025465m.g I 0.855
TCP2 Arabidopsis thaliana AT4G18390 D 0.855
Bostr.30275s0311 Boechera stricta Bostr.30275s0311 I 0.855
e_gw1.207.98.1 Physcomitrella patens e_gw1.207.98.1 I 0.855
GLYMA12G35720 Glycine max GLYMA12G35720 I 0.855
AMTR_s00357p00009370 Amborella trichopoda AMTR_s00357p00009370 I 0.854
TCP10 Arabidopsis lyrata scaffold_401627.1 I 0.854
orange1.1g009938m.g Citrus sinensis orange1.1g009938m.g I 0.854
Ciclev10014986m.g Citrus clementina Ciclev10014986m.g I 0.854
F775_18470 Aegilops tauschii F775_18470 I 0.852
MLOC_12004 Hordeum vulgare MLOC_12004 I 0.852
Solyc08g048370.2 Solanum lycopersicum Solyc08g048370.2 I 0.851
Sb02g003070 Sorghum bicolor Sb02g003070 I 0.851
Pavir.J35609 Panicum virgatum Pavir.J35609 I 0.851
Cucsa.047860 Cucumis sativus Cucsa.047860 I 0.850
Gorai.006G009800 Gossypium raimondii Gorai.006G009800 I 0.849
GRMZM2G015037 Zea mays GRMZM2G015037 I 0.849
Pavir.Ca01337 Panicum virgatum Pavir.Ca01337 I 0.849
MTR_4g109660 Medicago truncatula MTR_4g109660 I 0.849
AMTR_s00029p00245970 Amborella trichopoda AMTR_s00029p00245970 I 0.848
MDP0000149841 Malus domestica MDP0000149841 I 0.848
Gorai.008G199700 Gossypium raimondii Gorai.008G199700 I 0.848
ORGLA03G0335700 Oryza glaberrima ORGLA03G0335700 I 0.848
TCP2 Vitis vinifera VIT_10s0003g03910 I 0.847
PGSC0003DMG400001362 Solanum tuberosum PGSC0003DMG400001362 I 0.847
orange1.1g019898m.g Citrus sinensis orange1.1g019898m.g I 0.847
evm.TU.supercontig_94.62 Carica papaya evm.TU.supercontig_94.62 I 0.847
Ciclev10015871m.g Citrus clementina Ciclev10015871m.g I 0.847
VIT_10s0003g00870 Vitis vinifera VIT_10s0003g00870 I 0.847
gene26101-v1.0-hybrid Fragaria vesca gene26101-v1.0-hybrid I 0.846
GSMUA_Achr4G31520_001 Musa acuminata GSMUA_Achr4G31520_001 I 0.846
evm.TU.supercontig_17.1 Carica papaya evm.TU.supercontig_17.1 I 0.846
OBART05G22490 Oryza barthii OBART05G22490 I 0.846
Solyc02g089020.1 Solanum lycopersicum Solyc02g089020.1 I 0.845
Cla023702 Citrullus lanatus Cla023702 I 0.844
GLYMA08G10350 Glycine max GLYMA08G10350 I 0.844
MDP0000155433 Malus domestica MDP0000155433 I 0.844
OS01G0755500 Oryza sativa OS01G0755500 I 0.844
Bra021586 Brassica rapa Bra021586 I 0.844
Solyc08g048390.1 Solanum lycopersicum Solyc08g048390.1 I 0.844
LjSGA_022391.1 Lotus japonicus LjSGA_022391.1 I 0.844
BRADI2G50687 Brachypodium distachyon BRADI2G50687 I 0.844
PCF6 Oryza indica BGIOSGA013684 I 0.843
GRMZM2G166946 Zea mays GRMZM2G166946 I 0.843
Gorai.011G046000 Gossypium raimondii Gorai.011G046000 I 0.843
OGLUM03G36280 Oryza glumaepatula OGLUM03G36280 I 0.843
MLOC_63989 Hordeum vulgare MLOC_63989 I 0.843
ONIVA03G37780 Oryza nivara ONIVA03G37780 I 0.843
LPERR07G02820 Leersia perrieri LPERR07G02820 I 0.842
Bo3g147760 Brassica oleracea Bo3g147760 I 0.842
Bra010789 Brassica rapa Bra010789 I 0.842
30138.m003959 Ricinus communis 30138.m003959 I 0.842
TCP5 Arabidopsis lyrata fgenesh2_kg.8__2066__AT5G60970.1 D 0.842
GSMUA_Achr4G22960_001 Musa acuminata GSMUA_Achr4G22960_001 I 0.841
PGSC0003DMG400019904 Solanum tuberosum PGSC0003DMG400019904 I 0.841
Lus10034679.g Linum usitatissimum Lus10034679.g I 0.841
Cucsa.384890 Cucumis sativus Cucsa.384890 I 0.841
OMERI03G33790 Oryza meridionalis OMERI03G33790 I 0.840
GLYMA19G03786 Glycine max GLYMA19G03786 I 0.840
PCF6 Oryza sativa OS03G0785800 I 0.840
Bra012600 Brassica rapa Bra012600 I 0.840
ORUFI03G38070 Oryza rufipogon ORUFI03G38070 I 0.840
Bo7g105960 Brassica oleracea Bo7g105960 I 0.840
Cucsa.122730 Cucumis sativus Cucsa.122730 I 0.839
MDP0000388684 Malus domestica MDP0000388684 I 0.839
POPTR_0004s06440 Populus trichocarpa POPTR_0004s06440 I 0.839
Bo1g129830 Brassica oleracea Bo1g129830 I 0.839
LPERR05G18480 Leersia perrieri LPERR05G18480 I 0.839
GLYMA04G32324 Glycine max GLYMA04G32324 I 0.839
POPTR_0015s06980 Populus trichocarpa POPTR_0015s06980 I 0.839
mgf006703m Mimulus guttatus mgf006703m I 0.839
Lus10000463.g Linum usitatissimum Lus10000463.g I 0.839
SapurV1A.1394s0060 Salix purpurea SapurV1A.1394s0060 I 0.839
SapurV1A.0971s0180 Salix purpurea SapurV1A.0971s0180 I 0.839
Carubv10011113m.g Capsella rubella Carubv10011113m.g I 0.838
Cagra.3678s0010 Capsella grandiflora Cagra.3678s0010 I 0.838
Gorai.001G076700 Gossypium raimondii Gorai.001G076700 I 0.838
Lus10023297.g Linum usitatissimum Lus10023297.g I 0.838
ORGLA02G0280100 Oryza glaberrima ORGLA02G0280100 N 0.838
TCP17 Arabidopsis lyrata fgenesh2_kg.6__773__AT5G08070.1 I 0.837
AMTR_s00133p00053750 Amborella trichopoda AMTR_s00133p00053750 I 0.837
Traes_2AL_EA60A06AC Triticum aestivum Traes_2AL_EA60A06AC I 0.837
Traes_2BL_36A3AB3A2 Triticum aestivum Traes_2BL_36A3AB3A2 I 0.837
Pavir.J36433 Panicum virgatum Pavir.J36433 I 0.836
Carubv10026656m.g Capsella rubella Carubv10026656m.g I 0.836
Cagra.0083s0006 Capsella grandiflora Cagra.0083s0006 I 0.836
Si036075m.g Setaria italica Si036075m.g I 0.836
POPTR_0011s02350 Populus trichocarpa POPTR_0011s02350 I 0.835
TCP5 Arabidopsis thaliana AT5G60970 D 0.835
Cucsa.111880 Cucumis sativus Cucsa.111880 I 0.835
PK16724.1 Cannabis sativa PK16724.1 I 0.835
Pm010440 Prunus mume Pm010440 I 0.835
Cla019865 Citrullus lanatus Cla019865 I 0.835
TCM_029442 Theobroma cacao TCM_029442 I 0.835
GLYMA15G09910 Glycine max GLYMA15G09910 I 0.835
SapurV1A.0232s0150 Salix purpurea SapurV1A.0232s0150 I 0.835
Thhalv10004440m.g Eutrema salsugineum Thhalv10004440m.g I 0.835
Bra029344 Brassica rapa Bra029344 I 0.835
Bo2g161240 Brassica oleracea Bo2g161240 I 0.835
GLYMA13G29160 Glycine max GLYMA13G29160 I 0.835
PRUPE_ppa004612mg Prunus persica PRUPE_ppa004612mg I 0.835
PTF1 Vitis vinifera VIT_14s0068g00330 I 0.835
cassava2420.valid.m1 Manihot esculenta cassava2420.valid.m1 I 0.835
Bostr.26833s0140 Boechera stricta Bostr.26833s0140 I 0.835
29693.m001968 Ricinus communis 29693.m001968 I 0.835
PDK_20s1781021g001 Phoenix dactylifera PDK_20s1781021g001 I 0.835
cassava7638.valid.m1 Manihot esculenta cassava7638.valid.m1 I 0.835
AC205574.3_FG006 Zea mays AC205574.3_FG006 I 0.834
chr4.CM0500.330.nd Lotus japonicus chr4.CM0500.330.nd I 0.834
Ca_00482 Cicer arietinum Ca_00482 I 0.834
GRMZM2G089361 Zea mays GRMZM2G089361 I 0.834
Sb01g006020 Sorghum bicolor Sb01g006020 I 0.834
Pavir.J24681 Panicum virgatum Pavir.J24681 I 0.833
MDP0000287069 Malus domestica MDP0000287069 I 0.832
ONIVA01G36230 Oryza nivara ONIVA01G36230 I 0.831
OBART01G31910 Oryza barthii OBART01G31910 I 0.831
ORUFI01G35100 Oryza rufipogon ORUFI01G35100 I 0.831
OS01G0763200 Oryza sativa OS01G0763200 I 0.831
ORGLA01G0259400 Oryza glaberrima ORGLA01G0259400 I 0.831
Traes_5BL_2DDBAA0C2 Triticum aestivum Traes_5BL_2DDBAA0C2 I 0.831
BGIOSGA000770 Oryza indica BGIOSGA000770 I 0.831
LPERR01G06830 Leersia perrieri LPERR01G06830 I 0.831
Carubv10005003m.g Capsella rubella Carubv10005003m.g I 0.831
Cagra.2935s0020 Capsella grandiflora Cagra.2935s0020 I 0.831
MDP0000249507 Malus domestica MDP0000249507 I 0.830
mgf007729m Mimulus guttatus mgf007729m I 0.830
OPUNC07G03260 Oryza punctata OPUNC07G03260 I 0.830
AMTR_s00092p00113360 Amborella trichopoda AMTR_s00092p00113360 I 0.830
OMERI01G28950 Oryza meridionalis OMERI01G28950 I 0.830
mgf016959m Mimulus guttatus mgf016959m I 0.830
Sb03g001940 Sorghum bicolor Sb03g001940 I 0.830
Ca_24948 Cicer arietinum Ca_24948 I 0.829
MLOC_14785 Hordeum vulgare MLOC_14785 I 0.829
MLOC_10214 Hordeum vulgare MLOC_10214 I 0.829
GRMZM2G115516 Zea mays GRMZM2G115516 I 0.829
Solyc05g012840.1 Solanum lycopersicum Solyc05g012840.1 I 0.828
orange1.1g017725m.g Citrus sinensis orange1.1g017725m.g I 0.828
Ciclev10020626m.g Citrus clementina Ciclev10020626m.g I 0.828
gene30370-v1.0-hybrid Fragaria vesca gene30370-v1.0-hybrid I 0.827
MDP0000120671 Malus domestica MDP0000120671 I 0.827
Pm024946 Prunus mume Pm024946 I 0.827
GLYMA05G27367 Glycine max GLYMA05G27367 I 0.827
PRUPE_ppa014630mg Prunus persica PRUPE_ppa014630mg I 0.827
Ca_05033 Cicer arietinum Ca_05033 I 0.826
MDP0000693146 Malus domestica MDP0000693146 I 0.826
Carubv10023502m.g Capsella rubella Carubv10023502m.g I 0.826
OGLUM05G23780 Oryza glumaepatula OGLUM05G23780 I 0.825
TRAES3BF014900010CFD_g Triticum aestivum TRAES3BF014900010CFD_g I 0.824
MLOC_68285 Hordeum vulgare MLOC_68285 I 0.824
Pavir.Ia00505 Panicum virgatum Pavir.Ia00505 I 0.824
Cagra.2527s0006 Capsella grandiflora Cagra.2527s0006 I 0.824
Pavir.J03475 Panicum virgatum Pavir.J03475 I 0.824
Cla016530 Citrullus lanatus Cla016530 I 0.823
POPTR_0004s11510 Populus trichocarpa POPTR_0004s11510 I 0.823
Cucsa.215290 Cucumis sativus Cucsa.215290 I 0.823
Bra012990 Brassica rapa Bra012990 I 0.823
Bo7g098260 Brassica oleracea Bo7g098260 I 0.823
PDK_20s1781021g002 Phoenix dactylifera PDK_20s1781021g002 I 0.822
GRMZM2G148022 Zea mays GRMZM2G148022 I 0.822
evm.TU.supercontig_14.188 Carica papaya evm.TU.supercontig_14.188 I 0.822
POPTR_0017s13050 Populus trichocarpa POPTR_0017s13050 I 0.822
cassava29094.valid.m1 Manihot esculenta cassava29094.valid.m1 I 0.822
cassava30483.valid.m1 Manihot esculenta cassava30483.valid.m1 I 0.822
Cla010936 Citrullus lanatus Cla010936 I 0.822
gene04255-v1.0-hybrid Fragaria vesca gene04255-v1.0-hybrid I 0.822
SapurV1A.0323s0010 Salix purpurea SapurV1A.0323s0010 I 0.822
BRADI2G50190 Brachypodium distachyon BRADI2G50190 I 0.822
TCM_018809 Theobroma cacao TCM_018809 I 0.822
SapurV1A.0901s0090 Salix purpurea SapurV1A.0901s0090 I 0.822