Bostr.13129s0423 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.13129s0423 T007564_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.779 0.959
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.779 0.959
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.701 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.13129s0423.1.p AP2 77 128

Links

Other AP2 family TFs
Other Boechera stricta TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29729.m002292 Ricinus communis 29729.m002292 I 0.700
29820.m001008 Ricinus communis 29820.m001008 I 0.689
DREB2B Arabidopsis thaliana AT3G11020 I 0.706
DREB2A Arabidopsis thaliana AT5G05410 D 0.779
Bo1g141310 Brassica oleracea Bo1g141310 I 0.753
Bo2g006960 Brassica oleracea Bo2g006960 I 0.757
Bo3g063910 Brassica oleracea Bo3g063910 I 0.727
Bo5g136930 Brassica oleracea Bo5g136930 I 0.729
Bo9g177130 Brassica oleracea Bo9g177130 I 0.677
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.747
Bra001386 Brassica rapa Bra001386 I 0.728
Bra005852 Brassica rapa Bra005852 I 0.752
Bra028759 Brassica rapa Bra028759 I 0.757
Bra029889 Brassica rapa Bra029889 I 0.729
Bra034159 Brassica rapa Bra034159 I 0.743
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.785
Cagra.1655s0066 Capsella grandiflora Cagra.1655s0066 I 0.765
Cagra.7053s0020 Capsella grandiflora Cagra.7053s0020 I 0.699
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.785
Carubv10013771m.g Capsella rubella Carubv10013771m.g I 0.765
Carubv10023556m.g Capsella rubella Carubv10023556m.g I 0.699
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.691
cassava46663.m1 Manihot esculenta cassava46663.m1 I 0.693
chr1.LjT01D01.90.nd Lotus japonicus chr1.LjT01D01.90.nd I 0.732
Cla006713 Citrullus lanatus Cla006713 I 0.688
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.689
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.696
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.719
DREB2B Arabidopsis lyrata fgenesh2_kg.3__1148__AT3G11020.1 I 0.746
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.785
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.677
GLYMA07G19221 Glycine max GLYMA07G19221 I 0.726
GLYMA18G43750 Glycine max GLYMA18G43750 I 0.716
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.682
MDP0000165880 Malus domestica MDP0000165880 I 0.677
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.679
MTR_7g070220 Medicago truncatula MTR_7g070220 I 0.708
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.698
PGSC0003DMG401023951 Solanum tuberosum PGSC0003DMG401023951 I 0.719
PK07402.1 Cannabis sativa PK07402.1 D 0.701
Pm018989 Prunus mume Pm018989 I 0.684
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.680
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.699
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.684
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.684
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.713
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.684
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.713
Solyc06g050520.1 Solanum lycopersicum Solyc06g050520.1 I 0.712
TCM_021596 Theobroma cacao TCM_021596 I 0.680
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.764
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.680