29780.m001393 (Ricinus communis)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 29780.m001393 T024788_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29780.m001393 BBR 1 283

Links

Other BBR family TFs
Other Ricinus communis TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava18077.valid.m1 Manihot esculenta cassava18077.valid.m1 N 0.901
cassava18078.valid.m1 Manihot esculenta cassava18078.valid.m1 N 0.901
cassava39873.m1 Manihot esculenta cassava39873.m1 N 0.919
chr4.CM0387.290.nc Lotus japonicus chr4.CM0387.290.nc N 0.806
Ciclev10015354m.g Citrus clementina Ciclev10015354m.g N 0.792
Cla005911 Citrullus lanatus Cla005911 N 0.750
Cucsa.026600 Cucumis sativus Cucsa.026600 N 0.732
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 1.000
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 1.000
Eucgr.G02067 Eucalyptus grandis Eucgr.G02067 N 0.773
evm.TU.supercontig_2.121 Carica papaya evm.TU.supercontig_2.121 N 0.792
gene00620-v1.0-hybrid Fragaria vesca gene00620-v1.0-hybrid N 0.756
GLYMA05G26790 Glycine max GLYMA05G26790 N 0.749
GLYMA08G09780 Glycine max GLYMA08G09780 N 0.760
Gorai.002G171200 Gossypium raimondii Gorai.002G171200 N 0.799
Gorai.005G154200 Gossypium raimondii Gorai.005G154200 N 0.730
Gorai.012G183100 Gossypium raimondii Gorai.012G183100 N 0.729
Lus10023543.g Linum usitatissimum Lus10023543.g N 0.707
Lus10040427.g Linum usitatissimum Lus10040427.g N 0.729
MDP0000320521 Malus domestica MDP0000320521 N 0.802
MDP0000826219 Malus domestica MDP0000826219 N 0.813
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.857
orange1.1g022806m.g Citrus sinensis orange1.1g022806m.g N 0.784
PK28293.1 Cannabis sativa PK28293.1 N 0.810
Pm005924 Prunus mume Pm005924 N 0.830
POPTR_0008s13960 Populus trichocarpa POPTR_0008s13960 N 0.819
POPTR_0010s11180 Populus trichocarpa POPTR_0010s11180 N 0.816
PRUPE_ppa009765mg Prunus persica PRUPE_ppa009765mg N 0.826
SapurV1A.0015s0840 Salix purpurea SapurV1A.0015s0840 N 0.799
SapurV1A.0055s0040 Salix purpurea SapurV1A.0055s0040 N 0.786
TCM_011212 Theobroma cacao TCM_011212 N 0.814
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I 0.859
VIT_01s0011g06380 Vitis vinifera VIT_01s0011g06380 N 0.717
VIT_17s0000g01860 Vitis vinifera VIT_17s0000g01860 N 0.717