gene00620-v1.0-hybrid (Fragaria vesca)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 gene00620-v1.0-hybrid T024853_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna00620.1-v1.0-hybrid BBR 1 280

Links

Other BBR family TFs
Other Fragaria vesca TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29780.m001393 Ricinus communis 29780.m001393 N 0.756
cassava18077.valid.m1 Manihot esculenta cassava18077.valid.m1 N 0.768
cassava18078.valid.m1 Manihot esculenta cassava18078.valid.m1 N 0.768
cassava39873.m1 Manihot esculenta cassava39873.m1 N 0.782
chr4.CM0387.290.nc Lotus japonicus chr4.CM0387.290.nc N 0.734
Ciclev10015354m.g Citrus clementina Ciclev10015354m.g N 0.717
Cla005911 Citrullus lanatus Cla005911 N 0.721
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 1.000
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 1.000
evm.TU.supercontig_2.121 Carica papaya evm.TU.supercontig_2.121 N 0.745
GLYMA05G26790 Glycine max GLYMA05G26790 N 0.720
GLYMA08G09780 Glycine max GLYMA08G09780 N 0.734
Gorai.002G171200 Gossypium raimondii Gorai.002G171200 N 0.745
Gorai.005G154200 Gossypium raimondii Gorai.005G154200 N 0.708
MDP0000320521 Malus domestica MDP0000320521 N 0.793
MDP0000826219 Malus domestica MDP0000826219 N 0.816
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.833
orange1.1g022806m.g Citrus sinensis orange1.1g022806m.g N 0.717
PK28293.1 Cannabis sativa PK28293.1 N 0.768
Pm005924 Prunus mume Pm005924 N 0.819
POPTR_0008s13960 Populus trichocarpa POPTR_0008s13960 N 0.723
POPTR_0010s11180 Populus trichocarpa POPTR_0010s11180 N 0.734
PRUPE_ppa009765mg Prunus persica PRUPE_ppa009765mg N 0.816
SapurV1A.0015s0840 Salix purpurea SapurV1A.0015s0840 N 0.716
SapurV1A.0055s0040 Salix purpurea SapurV1A.0055s0040 N 0.708
TCM_011212 Theobroma cacao TCM_011212 N 0.756
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I 0.838