orange1.1g022806m.g (Citrus sinensis)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 orange1.1g022806m.g T024881_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g022801m BBR 1 292
orange1.1g022806m BBR 1 292

Links

Other BBR family TFs
Other Citrus sinensis TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29780.m001393 Ricinus communis 29780.m001393 N 0.784
cassava18077.valid.m1 Manihot esculenta cassava18077.valid.m1 N 0.824
cassava18078.valid.m1 Manihot esculenta cassava18078.valid.m1 N 0.824
cassava39873.m1 Manihot esculenta cassava39873.m1 N 0.802
chr4.CM0387.290.nc Lotus japonicus chr4.CM0387.290.nc N 0.731
Ciclev10015354m.g Citrus clementina Ciclev10015354m.g N 0.993
Cla005911 Citrullus lanatus Cla005911 N 0.757
Cucsa.026600 Cucumis sativus Cucsa.026600 N 0.761
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 1.000
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 1.000
Eucgr.G02067 Eucalyptus grandis Eucgr.G02067 N 0.762
evm.TU.supercontig_2.121 Carica papaya evm.TU.supercontig_2.121 N 0.792
gene00620-v1.0-hybrid Fragaria vesca gene00620-v1.0-hybrid N 0.717
GLYMA05G26790 Glycine max GLYMA05G26790 N 0.710
GLYMA08G09780 Glycine max GLYMA08G09780 N 0.745
Gorai.002G171200 Gossypium raimondii Gorai.002G171200 N 0.749
Gorai.012G183100 Gossypium raimondii Gorai.012G183100 N 0.707
Lus10023543.g Linum usitatissimum Lus10023543.g N 0.703
Lus10040427.g Linum usitatissimum Lus10040427.g N 0.731
MDP0000320521 Malus domestica MDP0000320521 N 0.753
MDP0000826219 Malus domestica MDP0000826219 N 0.770
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.833
PGSC0003DMG402029444 Solanum tuberosum PGSC0003DMG402029444 N 0.714
PK28293.1 Cannabis sativa PK28293.1 N 0.749
Pm005924 Prunus mume Pm005924 N 0.815
POPTR_0008s13960 Populus trichocarpa POPTR_0008s13960 N 0.739
POPTR_0010s11180 Populus trichocarpa POPTR_0010s11180 N 0.775
PRUPE_ppa009765mg Prunus persica PRUPE_ppa009765mg N 0.777
SapurV1A.0015s0840 Salix purpurea SapurV1A.0015s0840 N 0.728
SapurV1A.0055s0040 Salix purpurea SapurV1A.0055s0040 N 0.760
TCM_011212 Theobroma cacao TCM_011212 N 0.774
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I 0.859
VIT_01s0011g06380 Vitis vinifera VIT_01s0011g06380 N 0.706