BHLHE40 (Felis catus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSFCAG00000002966 T034168_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.914 1.000
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.914 1.000
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.914 1.000
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.914 1.000
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.914 1.000
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.914 1.000
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.914 1.000
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.914 1.000
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.914 1.000
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.914 1.000
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.914 1.000
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.914 1.000
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.914 1.000
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.914 1.000
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.914 1.000
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.914 0.981
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.914 0.981
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.914 0.981
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.914 0.981
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.914 0.981
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.914 0.981
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFCAP00000002736 bHLH 54 108

Links

Other bHLH family TFs
Other Felis catus TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30076.m004659 Ricinus communis 30076.m004659 I 0.000
30131.m007078 Ricinus communis 30131.m007078 I 0.000
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I 0.000
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.000
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I 0.000
BZIP53 Arabidopsis thaliana AT3G62420 D 0.000
BGIOSGA019118 Oryza indica BGIOSGA019118 I 0.000
Bo6g079450 Brassica oleracea Bo6g079450 I 0.000
Bo8g097830 Brassica oleracea Bo8g097830 I 0.000
Bra003500 Brassica rapa Bra003500 I 0.000
Bra007679 Brassica rapa Bra007679 I 0.000
Bra039631 Brassica rapa Bra039631 I 0.000
Carubv10018852m.g Capsella rubella Carubv10018852m.g I 0.000
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I 0.000
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.000
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.000
cassava36049.valid.m1 Manihot esculenta cassava36049.valid.m1 I 0.000
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.000
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.000
Ca_01004 Cicer arietinum Ca_01004 I 0.000
Ca_03512 Cicer arietinum Ca_03512 I 0.000
Ciclev10022730m.g Citrus clementina Ciclev10022730m.g I 0.000
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.000
Cla016841 Citrullus lanatus Cla016841 I 0.000
Cla020641 Citrullus lanatus Cla020641 I 0.000
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.000
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.000
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.000
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I 0.000
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.000
ATBZIP53 Arabidopsis lyrata fgenesh2_kg.5__2740__AT3G62420.1 I 0.000
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.000
GLYMA03G37790 Glycine max GLYMA03G37790 I 0.000
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.000
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.000
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.000
GLYMA19G40390 Glycine max GLYMA19G40390 I 0.000
Gorai.001G144200 Gossypium raimondii Gorai.001G144200 I 0.000
Gorai.002G126500 Gossypium raimondii Gorai.002G126500 I 0.000
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.000
Gorai.007G122800 Gossypium raimondii Gorai.007G122800 I 0.000
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I 0.000
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.000
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.000
GSMUA_Achr11G20700_001 Musa acuminata GSMUA_Achr11G20700_001 I 0.000
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.000
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I 0.000
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.000
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I 0.000
Lus10010005.g Linum usitatissimum Lus10010005.g I 0.000
Lus10025024.g Linum usitatissimum Lus10025024.g I 0.000
Lus10040428.g Linum usitatissimum Lus10040428.g I 0.000
MDP0000205823 Malus domestica MDP0000205823 I 0.000
MDP0000234798 Malus domestica MDP0000234798 I 0.000
MDP0000239026 Malus domestica MDP0000239026 I 0.000
MDP0000437680 Malus domestica MDP0000437680 I 0.000
MDP0000949327 Malus domestica MDP0000949327 I 0.000
mgf003466m Mimulus guttatus mgf003466m I 0.000
mgf018581m Mimulus guttatus mgf018581m I 0.000
MTR_1g087040 Medicago truncatula MTR_1g087040 I 0.000
ONIVA05G02010 Oryza nivara ONIVA05G02010 I 0.000
orange1.1g032187m.g Citrus sinensis orange1.1g032187m.g I 0.000
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.000
PGSC0003DMG400003529 Solanum tuberosum PGSC0003DMG400003529 I 0.000
PGSC0003DMG400003701 Solanum tuberosum PGSC0003DMG400003701 I 0.000
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I 0.000
PGSC0003DMG400022589 Solanum tuberosum PGSC0003DMG400022589 I 0.000
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.000
PK03779.1 Cannabis sativa PK03779.1 I 0.000
PK07533.1 Cannabis sativa PK07533.1 I 0.000
Pm002353 Prunus mume Pm002353 I 0.000
POPTR_0002s19720 Populus trichocarpa POPTR_0002s19720 I 0.000
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.000
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.000
POPTR_0014s11590 Populus trichocarpa POPTR_0014s11590 I 0.000
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.000
PRUPE_ppa013046mg Prunus persica PRUPE_ppa013046mg I 0.000
SapurV1A.0158s0220 Salix purpurea SapurV1A.0158s0220 I 0.000
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I 0.000
SapurV1A.3521s0020 Salix purpurea SapurV1A.3521s0020 I 0.000
Solyc02g084860.1 Solanum lycopersicum Solyc02g084860.1 I 0.000
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I 0.000
Solyc03g033730.1 Solanum lycopersicum Solyc03g033730.1 I 0.000
TCM_004807 Theobroma cacao TCM_004807 I 0.000
Thhalv10006418m.g Eutrema salsugineum Thhalv10006418m.g I 0.000
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.000