CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMGAG00000007210
(
Meleagris gallopavo
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSMGAG00000007210
T035190_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYOD1
M04116_2.00
Homo sapiens
BAACASSTGNYV
BRNCASSTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_1
0.884
0.962
MYOD1
M04117_2.00
Homo sapiens
BRVCASMTGDCG
CGHCAKSTGBYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_2
0.884
0.962
MYOD1
M04120_2.00
Homo sapiens
NAACASSTGNYV
BRNCASSTGTTN
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_1
0.884
0.962
MYOD1
M04121_2.00
Homo sapiens
BRMCASCTGDCR
YGHCAGSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_2
0.884
0.962
Myod1
M08060_2.00
Mus musculus
NVNRRCAGSTGBN
NVCASCTGYYNBN
ChIP-seq
Mathelier et al.(2014)
MA0499.1
0.884
0.962
MYOD1
M08724_2.00
Homo sapiens
NVNNRNRRCAGCTGN
NCAGCTGYYNYNNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_HUMAN.H11MO.0.A
0.884
0.962
Myod1
M08745_2.00
Mus musculus
NVNRRNRRCAGSTGB
VCASCTGYYNYYNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_MOUSE.H11MO.0.A
0.884
0.962
MYOD1
M09838_2.00
Homo sapiens
HRVCACCTGHBB
VVDCAGGTGBYD
Transfac
Matys et al.(2006)
V$MYOD_01
0.884
0.962
MYOD1
M09839_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOD_Q6_02
0.884
0.962
MYOD1
M09840_2.00
Homo sapiens
NVCABCTGNY
RNCAGVTGBN
Transfac
Matys et al.(2006)
V$MYOD_Q6
0.884
0.962
MYOD1
M04118_2.00
Homo sapiens
BAACANVTGTYV
BRACABNTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_1
0.884
0.962
MYOD1
M04119_2.00
Homo sapiens
BRRCASSTGDCR
YGHCASSTGYYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_2
0.884
0.962
MYOD1
M04122_2.00
Homo sapiens
NAMCASSTGBYV
BRVCASSTGKTN
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_1
0.884
0.962
MYOD1
M04123_2.00
Homo sapiens
BRMCASVTGNCR
YGNCABSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_2
0.884
0.962
Myf5
M09463_2.00
Mus musculus
NRRCAGCTGY
RCAGCTGYYN
Misc
Heinz et al.(2010)
GM-Myf5_GSE24852
0.870
0.942
MYF5
M09821_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYF5_Q6
0.870
0.942
MYOG
M04098_2.00
Homo sapiens
BRACAGCTGWCR
YGWCAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_1
0.839
0.788
MYOG
M04099_2.00
Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_2
0.839
0.788
MYOG
M04102_2.00
Homo sapiens
NRACARCTGWCR
YGWCAGYTGTYN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_1
0.839
0.788
MYOG
M04103_2.00
Homo sapiens
NAACARYTGTYN
NRACARYTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_2
0.839
0.788
Myog
M08061_2.00
Mus musculus
RRCAGCTGVNN
NNBCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0500.1
0.839
0.788
MYOG
M08721_2.00
Homo sapiens
BHVCAGCTGYYNB
VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_HUMAN.H11MO.0.B
0.839
0.788
Myog
M08755_2.00
Mus musculus
BHVCAGCTGYYNB
VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_MOUSE.H11MO.0.A
0.839
0.788
Myog
M09469_2.00
Mus musculus
RACAGCTG
CAGCTGTY
Misc
Heinz et al.(2010)
C2C12-MyoG_GSE36024
0.839
0.788
MYOG
M09829_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6_01
0.839
0.788
MYOG
M09830_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6
0.839
0.788
MYOG
M04100_2.00
Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_1
0.839
0.788
MYOG
M04101_2.00
Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_2
0.839
0.788
MYOG
M04104_2.00
Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_1
0.839
0.788
MYOG
M04105_2.00
Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_2
0.839
0.788
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000007306
bHLH
30
81
RRKAATMRERRRLSKVNEAFETLKRCTSTNPNQRLPKVEILRNAIRYIESLQ
Links
Other
bHLH
family TFs
Other
Meleagris gallopavo
TFs
220 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28152.m000914
Ricinus communis
28152.m000914
N
30170.m013749
Ricinus communis
30170.m013749
N
AMTR_s00164p00062120
Amborella trichopoda
AMTR_s00164p00062120
N
Aquca_017_00066
Aquilegia coerulea
Aquca_017_00066
N
Aquca_042_00162
Aquilegia coerulea
Aquca_042_00162
N
Aquca_042_00163
Aquilegia coerulea
Aquca_042_00163
N
BHLH54
Arabidopsis thaliana
AT1G27740
N
AT2G14760
Arabidopsis thaliana
AT2G14760
N
BHLH85
Arabidopsis thaliana
AT4G33880
N
BGIOSGA010239
Oryza indica
BGIOSGA010239
N
BGIOSGA011251
Oryza indica
BGIOSGA011251
N
BGIOSGA023988
Oryza indica
BGIOSGA023988
N
BGIOSGA035917
Oryza indica
BGIOSGA035917
N
Bo1g007780
Brassica oleracea
Bo1g007780
N
Bo3g142890
Brassica oleracea
Bo3g142890
N
Bo3g169400
Brassica oleracea
Bo3g169400
N
Bo5g052310
Brassica oleracea
Bo5g052310
N
Bo7g048630
Brassica oleracea
Bo7g048630
N
Bo7g116460
Brassica oleracea
Bo7g116460
N
Bostr.15697s0100
Boechera stricta
Bostr.15697s0100
N
Bostr.2199s0029
Boechera stricta
Bostr.2199s0029
N
Bostr.7867s1234
Boechera stricta
Bostr.7867s1234
N
Bra010921
Brassica rapa
Bra010921
N
Bra011476
Brassica rapa
Bra011476
N
Bra030063
Brassica rapa
Bra030063
N
Bra032846
Brassica rapa
Bra032846
N
Bra034587
Brassica rapa
Bra034587
N
Bra036969
Brassica rapa
Bra036969
N
BRADI1G14600
Brachypodium distachyon
BRADI1G14600
N
BRADI1G22960
Brachypodium distachyon
BRADI1G22960
N
BRADI1G70860
Brachypodium distachyon
BRADI1G70860
N
BRADI4G03070
Brachypodium distachyon
BRADI4G03070
N
Cagra.1305s0010
Capsella grandiflora
Cagra.1305s0010
N
Cagra.1822s0081
Capsella grandiflora
Cagra.1822s0081
N
Cagra.9228s0001
Capsella grandiflora
Cagra.9228s0001
N
Carubv10006623m.g
Capsella rubella
Carubv10006623m.g
N
Carubv10011072m.g
Capsella rubella
Carubv10011072m.g
N
Carubv10015484m.g
Capsella rubella
Carubv10015484m.g
N
cassava14986.m1
Manihot esculenta
cassava14986.m1
N
cassava20440.m1
Manihot esculenta
cassava20440.m1
N
cassava25589.m1
Manihot esculenta
cassava25589.m1
N
cassava38950.m1
Manihot esculenta
cassava38950.m1
N
Ca_01588
Cicer arietinum
Ca_01588
N
Ca_05644
Cicer arietinum
Ca_05644
N
Ca_11909
Cicer arietinum
Ca_11909
N
Ca_18366
Cicer arietinum
Ca_18366
N
chr1.CM0088.610.nd
Lotus japonicus
chr1.CM0088.610.nd
N
chr5.CM0096.500.nd
Lotus japonicus
chr5.CM0096.500.nd
N
chr5.CM0200.480.nc
Lotus japonicus
chr5.CM0200.480.nc
N
Ciclev10003450m.g
Citrus clementina
Ciclev10003450m.g
N
Ciclev10030309m.g
Citrus clementina
Ciclev10030309m.g
N
Cla016346
Citrullus lanatus
Cla016346
N
Cla020918
Citrullus lanatus
Cla020918
N
Cla022968
Citrullus lanatus
Cla022968
N
Cucsa.097490
Cucumis sativus
Cucsa.097490
N
Cucsa.219180
Cucumis sativus
Cucsa.219180
N
Cucsa.352750
Cucumis sativus
Cucsa.352750
N
estExt_fgenesh1_pg.C_600113
Physcomitrella patens
estExt_fgenesh1_pg.C_600113
N
Eucgr.F02259
Eucalyptus grandis
Eucgr.F02259
N
Eucgr.G01234
Eucalyptus grandis
Eucgr.G01234
N
Eucgr.I01069
Eucalyptus grandis
Eucgr.I01069
N
evm.TU.supercontig_106.57
Carica papaya
evm.TU.supercontig_106.57
N
evm.TU.supercontig_142.14
Carica papaya
evm.TU.supercontig_142.14
N
F775_02177
Aegilops tauschii
F775_02177
N
F775_02178
Aegilops tauschii
F775_02178
N
F775_02582
Aegilops tauschii
F775_02582
N
F775_02706
Aegilops tauschii
F775_02706
N
F775_27628
Aegilops tauschii
F775_27628
N
fgenesh1_pg.scaffold_164000047
Physcomitrella patens
fgenesh1_pg.scaffold_164000047
N
RSL4
Arabidopsis lyrata
fgenesh2_kg.1__2933__AT1G27740.1
N
fgenesh2_kg.3__3067__AT2G14760.1
Arabidopsis lyrata
fgenesh2_kg.3__3067__AT2G14760.1
N
RSL2
Arabidopsis lyrata
fgenesh2_kg.7__724__AT4G33880.1
N
gene02560-v1.0-hybrid
Fragaria vesca
gene02560-v1.0-hybrid
N
gene25554-v1.0-hybrid
Fragaria vesca
gene25554-v1.0-hybrid
N
gene25555-v1.0-hybrid
Fragaria vesca
gene25555-v1.0-hybrid
N
GLYMA04G04801
Glycine max
GLYMA04G04801
N
GLYMA10G40350
Glycine max
GLYMA10G40350
N
GLYMA10G40360
Glycine max
GLYMA10G40360
N
GLYMA14G09781
Glycine max
GLYMA14G09781
N
GLYMA17G35423
Glycine max
GLYMA17G35423
N
GLYMA20G26980
Glycine max
GLYMA20G26980
N
GLYMA20G26991
Glycine max
GLYMA20G26991
N
Gorai.005G231900
Gossypium raimondii
Gorai.005G231900
N
Gorai.009G219100
Gossypium raimondii
Gorai.009G219100
N
Gorai.010G025400
Gossypium raimondii
Gorai.010G025400
N
GRMZM2G057260
Zea mays
GRMZM2G057260
N
GRMZM2G383841
Zea mays
GRMZM2G383841
N
GRMZM2G395549
Zea mays
GRMZM2G395549
N
GSMUA_Achr2G17130_001
Musa acuminata
GSMUA_Achr2G17130_001
N
GSMUA_Achr3G18870_001
Musa acuminata
GSMUA_Achr3G18870_001
N
GSMUA_Achr4G23240_001
Musa acuminata
GSMUA_Achr4G23240_001
N
GSMUA_Achr6G07760_001
Musa acuminata
GSMUA_Achr6G07760_001
N
GSMUA_Achr6G16890_001
Musa acuminata
GSMUA_Achr6G16890_001
N
GSMUA_Achr9G09600_001
Musa acuminata
GSMUA_Achr9G09600_001
N
GSMUA_AchrUn_randomG07080_001
Musa acuminata
GSMUA_AchrUn_randomG07080_001
N
LPERR03G21650
Leersia perrieri
LPERR03G21650
N
LPERR07G17840
Leersia perrieri
LPERR07G17840
N
LPERR11G16970
Leersia perrieri
LPERR11G16970
N
LPERR12G14550
Leersia perrieri
LPERR12G14550
N
Lus10001068.g
Linum usitatissimum
Lus10001068.g
N
Lus10004315.g
Linum usitatissimum
Lus10004315.g
N
MDP0000131874
Malus domestica
MDP0000131874
N
MDP0000145825
Malus domestica
MDP0000145825
N
MDP0000198037
Malus domestica
MDP0000198037
N
MDP0000573178
Malus domestica
MDP0000573178
N
MDP0000946515
Malus domestica
MDP0000946515
N
mgf018282m
Mimulus guttatus
mgf018282m
N
mgf019332m
Mimulus guttatus
mgf019332m
N
mgf022238m
Mimulus guttatus
mgf022238m
N
mgf024863m
Mimulus guttatus
mgf024863m
N
MLOC_60270
Hordeum vulgare
MLOC_60270
N
MLOC_67369
Hordeum vulgare
MLOC_67369
N
MLOC_74022
Hordeum vulgare
MLOC_74022
N
MLOC_76486
Hordeum vulgare
MLOC_76486
N
MTR_1g018090
Medicago truncatula
MTR_1g018090
N
MTR_1g106460
Medicago truncatula
MTR_1g106460
N
MTR_1g106480
Medicago truncatula
MTR_1g106480
N
MTR_3g103030
Medicago truncatula
MTR_3g103030
N
MTR_5g005110
Medicago truncatula
MTR_5g005110
N
OB03G17860
Oryza brachyantha
OB03G17860
N
OB03G34210
Oryza brachyantha
OB03G34210
N
OB07G26210
Oryza brachyantha
OB07G26210
N
OB12G24200
Oryza brachyantha
OB12G24200
N
OBART03G07520
Oryza barthii
OBART03G07520
N
OBART03G26170
Oryza barthii
OBART03G26170
N
OBART12G17400
Oryza barthii
OBART12G17400
N
OGLUM03G07680
Oryza glumaepatula
OGLUM03G07680
N
OGLUM03G27050
Oryza glumaepatula
OGLUM03G27050
N
OGLUM07G20330
Oryza glumaepatula
OGLUM07G20330
N
OGLUM09G03740
Oryza glumaepatula
OGLUM09G03740
N
OLONG_006157
Oryza longistaminata
OLONG_006157
N
OLONG_008046
Oryza longistaminata
OLONG_008046
N
OLONG_010636
Oryza longistaminata
OLONG_010636
N
OLONG_014997
Oryza longistaminata
OLONG_014997
N
OMERI03G07360
Oryza meridionalis
OMERI03G07360
N
OMERI03G23570
Oryza meridionalis
OMERI03G23570
N
OMERI07G17220
Oryza meridionalis
OMERI07G17220
N
OMERI12G12030
Oryza meridionalis
OMERI12G12030
N
ONIVA03G07980
Oryza nivara
ONIVA03G07980
N
ONIVA03G27180
Oryza nivara
ONIVA03G27180
N
ONIVA07G18960
Oryza nivara
ONIVA07G18960
N
ONIVA12G15960
Oryza nivara
ONIVA12G15960
N
OPUNC03G07300
Oryza punctata
OPUNC03G07300
N
OPUNC03G23870
Oryza punctata
OPUNC03G23870
N
OPUNC07G19390
Oryza punctata
OPUNC07G19390
N
OPUNC12G15720
Oryza punctata
OPUNC12G15720
N
orange1.1g036928m.g
Citrus sinensis
orange1.1g036928m.g
N
orange1.1g047654m.g
Citrus sinensis
orange1.1g047654m.g
N
ORGLA03G0073500
Oryza glaberrima
ORGLA03G0073500
N
ORGLA03G0242600
Oryza glaberrima
ORGLA03G0242600
N
ORGLA12G0149000
Oryza glaberrima
ORGLA12G0149000
N
ORUFI03G07580
Oryza rufipogon
ORUFI03G07580
N
ORUFI03G27070
Oryza rufipogon
ORUFI03G27070
N
ORUFI07G21430
Oryza rufipogon
ORUFI07G21430
N
ORUFI12G19280
Oryza rufipogon
ORUFI12G19280
N
OS03G0205300
Oryza sativa
OS03G0205300
N
OS07G0588400
Oryza sativa
OS07G0588400
N
OS12G0589000
Oryza sativa
OS12G0589000
N
Pavir.Ba01059
Panicum virgatum
Pavir.Ba01059
N
Pavir.Bb01173
Panicum virgatum
Pavir.Bb01173
N
Pavir.Ia00352
Panicum virgatum
Pavir.Ia00352
N
Pavir.Ia04640
Panicum virgatum
Pavir.Ia04640
N
Pavir.Ib00696
Panicum virgatum
Pavir.Ib00696
N
Pavir.J00626
Panicum virgatum
Pavir.J00626
N
PGSC0003DMG400021526
Solanum tuberosum
PGSC0003DMG400021526
N
PGSC0003DMG400036714
Solanum tuberosum
PGSC0003DMG400036714
N
PGSC0003DMG400039299
Solanum tuberosum
PGSC0003DMG400039299
N
PK01802.1
Cannabis sativa
PK01802.1
N
Pm005392
Prunus mume
Pm005392
N
Pm021172
Prunus mume
Pm021172
N
POPTR_0001s30150
Populus trichocarpa
POPTR_0001s30150
N
POPTR_0002s12000
Populus trichocarpa
POPTR_0002s12000
N
POPTR_0009s09210
Populus trichocarpa
POPTR_0009s09210
N
POPTR_0014s01730
Populus trichocarpa
POPTR_0014s01730
N
PRUPE_ppa015160mg
Prunus persica
PRUPE_ppa015160mg
N
SapurV1A.0005s0400
Salix purpurea
SapurV1A.0005s0400
N
SapurV1A.0019s0320
Salix purpurea
SapurV1A.0019s0320
N
SapurV1A.0476s0200
Salix purpurea
SapurV1A.0476s0200
N
Sb01g007160
Sorghum bicolor
Sb01g007160
N
Sb02g037990
Sorghum bicolor
Sb02g037990
N
Sb05g025230
Sorghum bicolor
Sb05g025230
N
Si032445m.g
Setaria italica
Si032445m.g
N
Si039720m.g
Setaria italica
Si039720m.g
N
Solyc01g107140.1
Solanum lycopersicum
Solyc01g107140.1
N
Solyc04g077960.1
Solanum lycopersicum
Solyc04g077960.1
N
TCM_007220
Theobroma cacao
TCM_007220
N
TCM_034717
Theobroma cacao
TCM_034717
N
Thhalv10003393m.g
Eutrema salsugineum
Thhalv10003393m.g
N
Thhalv10009862m.g
Eutrema salsugineum
Thhalv10009862m.g
N
Thhalv10026786m.g
Eutrema salsugineum
Thhalv10026786m.g
N
Traes_2AS_9A3F73BE3
Triticum aestivum
Traes_2AS_9A3F73BE3
N
Traes_2BS_659F9ABB9
Triticum aestivum
Traes_2BS_659F9ABB9
N
Traes_2DS_7C9C33E09
Triticum aestivum
Traes_2DS_7C9C33E09
N
Traes_4AS_7530AAEB4
Triticum aestivum
Traes_4AS_7530AAEB4
N
Traes_4BL_4B8CA74B8
Triticum aestivum
Traes_4BL_4B8CA74B8
N
Traes_4BS_9BFCC52AD
Triticum aestivum
Traes_4BS_9BFCC52AD
N
Traes_4DL_61AE80723
Triticum aestivum
Traes_4DL_61AE80723
N
Traes_4DS_7488F4608
Triticum aestivum
Traes_4DS_7488F4608
N
Traes_5AL_ED57961C7
Triticum aestivum
Traes_5AL_ED57961C7
N
Traes_5AS_5B9D5E067
Triticum aestivum
Traes_5AS_5B9D5E067
N
Traes_5BS_0F8DBB33D
Triticum aestivum
Traes_5BS_0F8DBB33D
N
Traes_5DL_3BA7EE3F0
Triticum aestivum
Traes_5DL_3BA7EE3F0
N
Traes_5DS_51467BEB4
Triticum aestivum
Traes_5DS_51467BEB4
N
TRIUR3_01454
Triticum urartu
TRIUR3_01454
N
TRIUR3_17670
Triticum urartu
TRIUR3_17670
N
TRIUR3_24341
Triticum urartu
TRIUR3_24341
N
TRIUR3_35464
Triticum urartu
TRIUR3_35464
N
VIT_03s0091g00730
Vitis vinifera
VIT_03s0091g00730
N
VIT_18s0001g09210
Vitis vinifera
VIT_18s0001g09210
N