CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000131874
(
Malus domestica
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
MDP0000131874
T050318_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000131874
bHLH
286
329
LYARKRREKINARLRVLQGLIPNGTKVDISTMLEEAVHYVKFLQ
Links
Other
bHLH
family TFs
Other
Malus domestica
TFs
195 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28152.m000914
Ricinus communis
28152.m000914
N
0.856
30170.m013749
Ricinus communis
30170.m013749
N
0.856
AMTR_s00164p00062120
Amborella trichopoda
AMTR_s00164p00062120
N
0.856
Aquca_017_00066
Aquilegia coerulea
Aquca_017_00066
N
0.856
Aquca_042_00162
Aquilegia coerulea
Aquca_042_00162
N
0.856
Aquca_042_00163
Aquilegia coerulea
Aquca_042_00163
N
0.856
BHLH54
Arabidopsis thaliana
AT1G27740
N
0.892
AT2G14760
Arabidopsis thaliana
AT2G14760
N
0.856
BHLH85
Arabidopsis thaliana
AT4G33880
N
0.856
BGIOSGA010239
Oryza indica
BGIOSGA010239
N
0.845
BGIOSGA011251
Oryza indica
BGIOSGA011251
N
0.859
BGIOSGA023988
Oryza indica
BGIOSGA023988
N
0.856
BGIOSGA035917
Oryza indica
BGIOSGA035917
N
0.856
Bo1g007780
Brassica oleracea
Bo1g007780
N
0.856
Bo3g142890
Brassica oleracea
Bo3g142890
N
0.892
Bo3g169400
Brassica oleracea
Bo3g169400
N
0.856
Bo5g052310
Brassica oleracea
Bo5g052310
N
0.892
Bo7g048630
Brassica oleracea
Bo7g048630
N
0.892
Bo7g116460
Brassica oleracea
Bo7g116460
N
0.856
Bostr.15697s0100
Boechera stricta
Bostr.15697s0100
N
0.892
Bostr.2199s0029
Boechera stricta
Bostr.2199s0029
N
0.856
Bostr.7867s1234
Boechera stricta
Bostr.7867s1234
N
0.856
Bra010921
Brassica rapa
Bra010921
N
0.892
Bra011476
Brassica rapa
Bra011476
N
0.856
Bra030063
Brassica rapa
Bra030063
N
0.892
Bra032846
Brassica rapa
Bra032846
N
0.892
Bra034587
Brassica rapa
Bra034587
N
0.856
Bra036969
Brassica rapa
Bra036969
N
0.856
BRADI1G14600
Brachypodium distachyon
BRADI1G14600
N
0.856
BRADI1G70860
Brachypodium distachyon
BRADI1G70860
N
0.860
BRADI4G03070
Brachypodium distachyon
BRADI4G03070
N
0.856
Cagra.1305s0010
Capsella grandiflora
Cagra.1305s0010
N
0.856
Cagra.1822s0081
Capsella grandiflora
Cagra.1822s0081
N
0.892
Cagra.9228s0001
Capsella grandiflora
Cagra.9228s0001
N
0.856
Carubv10006623m.g
Capsella rubella
Carubv10006623m.g
N
0.856
Carubv10011072m.g
Capsella rubella
Carubv10011072m.g
N
0.892
Carubv10015484m.g
Capsella rubella
Carubv10015484m.g
N
0.856
cassava14986.m1
Manihot esculenta
cassava14986.m1
N
0.856
cassava20440.m1
Manihot esculenta
cassava20440.m1
N
0.856
cassava25589.m1
Manihot esculenta
cassava25589.m1
N
0.856
cassava38950.m1
Manihot esculenta
cassava38950.m1
N
0.856
Ca_01588
Cicer arietinum
Ca_01588
N
0.856
Ca_05644
Cicer arietinum
Ca_05644
N
0.856
Ca_11909
Cicer arietinum
Ca_11909
N
0.856
Ca_18366
Cicer arietinum
Ca_18366
N
0.856
chr1.CM0088.610.nd
Lotus japonicus
chr1.CM0088.610.nd
N
0.856
chr5.CM0096.500.nd
Lotus japonicus
chr5.CM0096.500.nd
N
0.892
chr5.CM0200.480.nc
Lotus japonicus
chr5.CM0200.480.nc
N
0.892
Ciclev10003450m.g
Citrus clementina
Ciclev10003450m.g
N
0.856
Ciclev10030309m.g
Citrus clementina
Ciclev10030309m.g
N
0.856
Cla016346
Citrullus lanatus
Cla016346
N
0.856
Cla020918
Citrullus lanatus
Cla020918
N
0.856
Cla022968
Citrullus lanatus
Cla022968
N
0.856
Cucsa.097490
Cucumis sativus
Cucsa.097490
N
0.856
Cucsa.219180
Cucumis sativus
Cucsa.219180
N
0.856
Cucsa.352750
Cucumis sativus
Cucsa.352750
N
0.856
Eucgr.F02259
Eucalyptus grandis
Eucgr.F02259
N
0.859
Eucgr.G01234
Eucalyptus grandis
Eucgr.G01234
N
0.859
Eucgr.I01069
Eucalyptus grandis
Eucgr.I01069
N
0.856
evm.TU.supercontig_106.57
Carica papaya
evm.TU.supercontig_106.57
N
0.856
evm.TU.supercontig_142.14
Carica papaya
evm.TU.supercontig_142.14
N
0.856
F775_02177
Aegilops tauschii
F775_02177
N
0.846
F775_02178
Aegilops tauschii
F775_02178
N
0.846
F775_02582
Aegilops tauschii
F775_02582
N
0.856
F775_27628
Aegilops tauschii
F775_27628
N
0.892
RSL4
Arabidopsis lyrata
fgenesh2_kg.1__2933__AT1G27740.1
N
0.892
fgenesh2_kg.3__3067__AT2G14760.1
Arabidopsis lyrata
fgenesh2_kg.3__3067__AT2G14760.1
N
0.844
RSL2
Arabidopsis lyrata
fgenesh2_kg.7__724__AT4G33880.1
N
0.856
gene02560-v1.0-hybrid
Fragaria vesca
gene02560-v1.0-hybrid
N
0.856
gene25554-v1.0-hybrid
Fragaria vesca
gene25554-v1.0-hybrid
N
0.868
gene25555-v1.0-hybrid
Fragaria vesca
gene25555-v1.0-hybrid
N
0.892
GLYMA04G04801
Glycine max
GLYMA04G04801
N
0.856
GLYMA10G40350
Glycine max
GLYMA10G40350
N
0.856
GLYMA10G40360
Glycine max
GLYMA10G40360
N
0.856
GLYMA14G09781
Glycine max
GLYMA14G09781
N
0.856
GLYMA17G35423
Glycine max
GLYMA17G35423
N
0.856
GLYMA20G26980
Glycine max
GLYMA20G26980
N
0.856
GLYMA20G26991
Glycine max
GLYMA20G26991
N
0.856
Gorai.005G231900
Gossypium raimondii
Gorai.005G231900
N
0.856
Gorai.009G219100
Gossypium raimondii
Gorai.009G219100
N
0.856
Gorai.010G025400
Gossypium raimondii
Gorai.010G025400
N
0.856
GRMZM2G057260
Zea mays
GRMZM2G057260
N
0.845
GRMZM2G383841
Zea mays
GRMZM2G383841
N
0.845
GRMZM2G395549
Zea mays
GRMZM2G395549
N
0.856
GSMUA_Achr2G17130_001
Musa acuminata
GSMUA_Achr2G17130_001
N
0.853
GSMUA_Achr3G18870_001
Musa acuminata
GSMUA_Achr3G18870_001
N
0.856
GSMUA_Achr4G23240_001
Musa acuminata
GSMUA_Achr4G23240_001
N
0.856
GSMUA_Achr6G07760_001
Musa acuminata
GSMUA_Achr6G07760_001
N
0.856
GSMUA_Achr9G09600_001
Musa acuminata
GSMUA_Achr9G09600_001
N
0.877
LPERR03G21650
Leersia perrieri
LPERR03G21650
N
0.845
LPERR07G17840
Leersia perrieri
LPERR07G17840
N
0.856
LPERR11G16970
Leersia perrieri
LPERR11G16970
N
0.859
LPERR12G14550
Leersia perrieri
LPERR12G14550
N
0.856
Lus10001068.g
Linum usitatissimum
Lus10001068.g
N
0.856
Lus10004315.g
Linum usitatissimum
Lus10004315.g
N
0.856
MDP0000145825
Malus domestica
MDP0000145825
N
0.856
MDP0000198037
Malus domestica
MDP0000198037
N
0.856
MDP0000573178
Malus domestica
MDP0000573178
N
0.856
MDP0000946515
Malus domestica
MDP0000946515
N
0.891
mgf018282m
Mimulus guttatus
mgf018282m
N
0.856
mgf019332m
Mimulus guttatus
mgf019332m
N
0.892
mgf022238m
Mimulus guttatus
mgf022238m
N
0.856
mgf024863m
Mimulus guttatus
mgf024863m
N
0.856
MLOC_60270
Hordeum vulgare
MLOC_60270
N
0.856
MLOC_67369
Hordeum vulgare
MLOC_67369
N
0.862
MLOC_76486
Hordeum vulgare
MLOC_76486
N
0.856
MTR_1g018090
Medicago truncatula
MTR_1g018090
N
0.856
MTR_1g106460
Medicago truncatula
MTR_1g106460
N
0.856
MTR_1g106480
Medicago truncatula
MTR_1g106480
N
0.856
MTR_3g103030
Medicago truncatula
MTR_3g103030
N
0.859
MTR_5g005110
Medicago truncatula
MTR_5g005110
N
0.856
OB03G17860
Oryza brachyantha
OB03G17860
N
0.859
OB03G34210
Oryza brachyantha
OB03G34210
N
0.845
OB07G26210
Oryza brachyantha
OB07G26210
N
0.856
OB12G24200
Oryza brachyantha
OB12G24200
N
0.856
OBART03G07520
Oryza barthii
OBART03G07520
N
0.859
OBART03G26170
Oryza barthii
OBART03G26170
N
0.845
OBART12G17400
Oryza barthii
OBART12G17400
N
0.856
OGLUM03G07680
Oryza glumaepatula
OGLUM03G07680
N
0.859
OGLUM03G27050
Oryza glumaepatula
OGLUM03G27050
N
0.845
OGLUM07G20330
Oryza glumaepatula
OGLUM07G20330
N
0.856
OGLUM09G03740
Oryza glumaepatula
OGLUM09G03740
N
0.856
OLONG_006157
Oryza longistaminata
OLONG_006157
N
0.856
OLONG_008046
Oryza longistaminata
OLONG_008046
N
0.859
OLONG_010636
Oryza longistaminata
OLONG_010636
N
0.845
OLONG_014997
Oryza longistaminata
OLONG_014997
N
0.856
OMERI03G07360
Oryza meridionalis
OMERI03G07360
N
0.859
OMERI03G23570
Oryza meridionalis
OMERI03G23570
N
0.845
OMERI07G17220
Oryza meridionalis
OMERI07G17220
N
0.856
OMERI12G12030
Oryza meridionalis
OMERI12G12030
N
0.856
ONIVA03G07980
Oryza nivara
ONIVA03G07980
N
0.859
ONIVA03G27180
Oryza nivara
ONIVA03G27180
N
0.845
ONIVA07G18960
Oryza nivara
ONIVA07G18960
N
0.856
ONIVA12G15960
Oryza nivara
ONIVA12G15960
N
0.856
OPUNC03G07300
Oryza punctata
OPUNC03G07300
N
0.859
OPUNC03G23870
Oryza punctata
OPUNC03G23870
N
0.845
OPUNC07G19390
Oryza punctata
OPUNC07G19390
N
0.856
OPUNC12G15720
Oryza punctata
OPUNC12G15720
N
0.856
orange1.1g036928m.g
Citrus sinensis
orange1.1g036928m.g
N
0.856
orange1.1g047654m.g
Citrus sinensis
orange1.1g047654m.g
N
0.856
ORGLA03G0073500
Oryza glaberrima
ORGLA03G0073500
N
0.859
ORGLA03G0242600
Oryza glaberrima
ORGLA03G0242600
N
0.845
ORGLA12G0149000
Oryza glaberrima
ORGLA12G0149000
N
0.856
ORUFI03G07580
Oryza rufipogon
ORUFI03G07580
N
0.859
ORUFI03G27070
Oryza rufipogon
ORUFI03G27070
N
0.845
ORUFI07G21430
Oryza rufipogon
ORUFI07G21430
N
0.856
ORUFI12G19280
Oryza rufipogon
ORUFI12G19280
N
0.856
OS03G0205300
Oryza sativa
OS03G0205300
N
0.859
OS07G0588400
Oryza sativa
OS07G0588400
N
0.856
OS12G0589000
Oryza sativa
OS12G0589000
N
0.856
Pavir.Ba01059
Panicum virgatum
Pavir.Ba01059
N
0.845
Pavir.Bb01173
Panicum virgatum
Pavir.Bb01173
N
0.845
Pavir.Ia00352
Panicum virgatum
Pavir.Ia00352
N
0.856
Pavir.Ia04640
Panicum virgatum
Pavir.Ia04640
N
0.856
Pavir.Ib00696
Panicum virgatum
Pavir.Ib00696
N
0.856
Pavir.J00626
Panicum virgatum
Pavir.J00626
N
0.856
PGSC0003DMG400021526
Solanum tuberosum
PGSC0003DMG400021526
N
0.856
PGSC0003DMG400036714
Solanum tuberosum
PGSC0003DMG400036714
N
0.856
PGSC0003DMG400039299
Solanum tuberosum
PGSC0003DMG400039299
N
0.859
PK01802.1
Cannabis sativa
PK01802.1
N
0.856
Pm005392
Prunus mume
Pm005392
N
0.856
Pm021172
Prunus mume
Pm021172
N
0.892
POPTR_0001s30150
Populus trichocarpa
POPTR_0001s30150
N
0.856
POPTR_0002s12000
Populus trichocarpa
POPTR_0002s12000
N
0.856
POPTR_0009s09210
Populus trichocarpa
POPTR_0009s09210
N
0.856
POPTR_0014s01730
Populus trichocarpa
POPTR_0014s01730
N
0.856
PRUPE_ppa015160mg
Prunus persica
PRUPE_ppa015160mg
N
0.856
SapurV1A.0005s0400
Salix purpurea
SapurV1A.0005s0400
N
0.856
SapurV1A.0019s0320
Salix purpurea
SapurV1A.0019s0320
N
0.856
SapurV1A.0476s0200
Salix purpurea
SapurV1A.0476s0200
N
0.856
Sb01g007160
Sorghum bicolor
Sb01g007160
N
0.856
Sb02g037990
Sorghum bicolor
Sb02g037990
N
0.845
Sb05g025230
Sorghum bicolor
Sb05g025230
N
0.859
Si032445m.g
Setaria italica
Si032445m.g
N
0.845
Si039720m.g
Setaria italica
Si039720m.g
N
0.856
Solyc01g107140.1
Solanum lycopersicum
Solyc01g107140.1
N
0.856
Solyc04g077960.1
Solanum lycopersicum
Solyc04g077960.1
N
0.856
TCM_007220
Theobroma cacao
TCM_007220
N
0.856
TCM_034717
Theobroma cacao
TCM_034717
N
0.856
Thhalv10003393m.g
Eutrema salsugineum
Thhalv10003393m.g
N
0.856
Thhalv10009862m.g
Eutrema salsugineum
Thhalv10009862m.g
N
0.892
Thhalv10026786m.g
Eutrema salsugineum
Thhalv10026786m.g
N
0.856
Traes_4AL_6A6EC9A6A
Triticum aestivum
Traes_4AL_6A6EC9A6A
N
0.892
Traes_4AS_7530AAEB4
Triticum aestivum
Traes_4AS_7530AAEB4
N
0.862
Traes_4BL_4B8CA74B8
Triticum aestivum
Traes_4BL_4B8CA74B8
N
0.838
Traes_4BS_9BFCC52AD
Triticum aestivum
Traes_4BS_9BFCC52AD
N
0.892
Traes_4DL_61AE80723
Triticum aestivum
Traes_4DL_61AE80723
N
0.862
Traes_4DS_7488F4608
Triticum aestivum
Traes_4DS_7488F4608
N
0.892
Traes_5AS_5B9D5E067
Triticum aestivum
Traes_5AS_5B9D5E067
N
0.856
Traes_5DS_51467BEB4
Triticum aestivum
Traes_5DS_51467BEB4
N
0.856
TRIUR3_01454
Triticum urartu
TRIUR3_01454
N
0.862
TRIUR3_24341
Triticum urartu
TRIUR3_24341
N
0.856
TRIUR3_35464
Triticum urartu
TRIUR3_35464
N
0.846
VIT_03s0091g00730
Vitis vinifera
VIT_03s0091g00730
N
0.856
VIT_18s0001g09210
Vitis vinifera
VIT_18s0001g09210
N
0.856