CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LOAG_04415
(
Loa loa
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00751 (DM)
IPR001275
LOAG_04415
T169344_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DMRTA2
M01930_2.00
Homo sapiens
NNHDTDDNNN
NNNHHAHDNN
PBM
Weirauch et al.(2014)
pTH9198
0.962
0.936
DMRTA2
M04692_2.00
Homo sapiens
VHTGTWDCVDHN
NDHBGHWACADB
SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX
0.962
0.936
DMRTA2
M10433_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT5_01
0.962
0.936
DMRTA2
M04693_2.00
Homo sapiens
HHTGTWDCVNHN
NDNBGHWACADD
SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX
0.962
0.936
dmrta2
M01937_2.00
Xenopus tropicalis
NNWDWDDN
NHHWHWNN
PBM
Weirauch et al.(2014)
pTH9300
0.962
0.915
dmrt99B
M01935_2.00
Drosophila melanogaster
WRTWDCNDNN
NNHNGHWAYW
PBM
Weirauch et al.(2014)
pTH9261
0.962
0.894
dmrt99B
M01211_2.00
Drosophila melanogaster
NNHDTDDNNN
NNNHHAHDNN
PBM
Lambert et al.(2019)
pTH9799
0.962
0.894
dmrt99B
M03720_2.00
Drosophila melanogaster
HNGHWACAATGTWDCND
HNGHWACATTGTWDCND
SELEX
Nitta et al.(2015)
dmrt99B_1
0.962
0.894
dmd-5
M00659_2.00
Caenorhabditis elegans
WNWRTWDHNN
NNDHWAYWNW
PBM
Narasimhan et al.(2015)
pTH10777
0.955
0.894
dmd-4
M00656_2.00
Caenorhabditis elegans
NWGTAWCNNN
NNNGWTACWN
PBM
Narasimhan et al.(2015)
pTH10640
0.935
0.809
Dmrt1
M09027_2.00
Mus musculus
HDGHWACAAWGTWDCHN
NDGHWACWTTGTWDCHD
Misc
Kulakovskiy et al.(2013)
DMRT1_MOUSE.H11MO.0.C
0.934
0.787
DMRT1
M01928_2.00
Homo sapiens
NDWGTWDCNN
NNGHWACWHN
PBM
Weirauch et al.(2014)
pTH9197
0.933
0.787
DMRT1
M01929_2.00
Homo sapiens
TGTATCAA
TTGATACA
PBM
Weirauch et al.(2014)
pTH9446
0.933
0.787
DMRT1
M04683_2.00
Homo sapiens
NWTGTWDCVWHN
NDWBGHWACAWN
SELEX
Yin et al.(2017)
DMRT1_FL_HT-SELEX
0.933
0.787
DMRT1
M10431_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT1_01
0.933
0.787
DMRT1
M04684_2.00
Homo sapiens
NDYGTWDCVNNN
NNNBGHWACRHN
SELEX
Yin et al.(2017)
DMRT1_FL_Methyl-HT-SELEX
0.933
0.787
DMRT2
M01931_2.00
Homo sapiens
NAATKTATHN
NDATAMATTN
PBM
Weirauch et al.(2014)
pTH9189
0.928
0.766
DMRT2
M10434_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT2_01
0.928
0.766
DMRT3
M01927_2.00
Homo sapiens
NWTGTAWCMNN
NNKGWTACAWN
PBM
Weirauch et al.(2014)
pTH9188
0.927
0.787
DMRT3
M04681_2.00
Homo sapiens
AWTGTAWCAAWWH
DWWTTGWTACAWT
SELEX
Yin et al.(2017)
DMRT3_eDBD_HT-SELEX
0.927
0.787
DMRT3
M10430_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT3_01
0.927
0.787
DMRT3
M04682_2.00
Homo sapiens
AATGTAWCRAWWY
RWWTYGWTACATT
SELEX
Yin et al.(2017)
DMRT3_eDBD_Methyl-HT-SELEX
0.927
0.787
dmrt93B
M03718_2.00
Drosophila melanogaster
NDTGTATCRWW
WWYGATACAHN
SELEX
Nitta et al.(2015)
dmrt93B_1
0.902
0.723
dmrt93B
M03719_2.00
Drosophila melanogaster
NNHGTAWCNNN
NNNGWTACDNN
SELEX
Nitta et al.(2015)
dmrt93B_2
0.902
0.723
ENSMODG00000010059
M01932_2.00
Monodelphis domestica
NDWGTWDHNN
NNDHWACWHN
PBM
Weirauch et al.(2014)
pTH9215
0.877
0.660
DMRTC2
M01926_2.00
Cavia porcellus
NNHDWNDN
NHNWHDNN
PBM
Weirauch et al.(2014)
pTH9250
0.874
0.681
Dmrtc2
M00789_2.00
Mus musculus
NNNATGTATHMNN
NNKDATACATNNN
PBM
Weirauch et al.(2013)
pTH3205
0.873
0.660
DMRTC2
M04685_2.00
Homo sapiens
TGTAWCRTTB
VAAYGWTACA
SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_1
0.873
0.660
DMRTC2
M04686_2.00
Homo sapiens
NWTGTADCAAWW
WWTTGHTACAWN
SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_2
0.873
0.660
DMRTC2
M04688_2.00
Homo sapiens
TGTATCGTTC
GAACGATACA
SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_1
0.873
0.660
DMRTC2
M04689_2.00
Homo sapiens
NDTGTRKCAAWH
DWTTGMYACAHN
SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_2
0.873
0.660
DMRTC2
M10432_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT7_01
0.873
0.660
DMRTC2
M04687_2.00
Homo sapiens
NATGTAKCRAWW
WWTYGMTACATN
SELEX
Yin et al.(2017)
DMRTC2_eDBD_Methyl-HT-SELEX
0.873
0.660
DMRTC2
M04690_2.00
Homo sapiens
YGTATCGTTY
RAACGATACR
SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_1
0.873
0.660
DMRTC2
M04691_2.00
Homo sapiens
NRTGTRKCRAWW
WWTYGMYACAYN
SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_2
0.873
0.660
dsx
M06183_2.00
Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA
B1H
Zhu et al.(2011)
dsx-F_FlyReg_FBgn0000504
0.869
0.660
dsx
M06184_2.00
Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA
B1H
Zhu et al.(2011)
dsx-M_FlyReg_FBgn0000504
0.869
0.660
Dmrtb1
M09028_2.00
Mus musculus
DGHWACAMWGTWDCHV
BDGHWACWKTGTWDCH
Misc
Kulakovskiy et al.(2013)
DMRTB_MOUSE.H11MO.0.C
0.869
0.617
ENSOANG00000013938
M01933_2.00
Ornithorhynchus anatinus
NNWGTWDNNN
NNNHWACWNN
PBM
Weirauch et al.(2014)
pTH9271
0.862
0.638
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFO24068.1
DM
31
77
RIPKCARCRNHGIVSALKGHKRYCKWKDCLCAKCTLIAERQRVMAAQ
Links
Other
DM
family TFs
Other
Loa loa
TFs
650 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL007190
Aedes aegypti
AAEL007190
I
AALB001133
Anopheles albimanus
AALB001133
I
Aan_R004022
Calypte anna
Aan_R004022
I
AARA003887
Anopheles arabiensis
AARA003887
I
AATE003142
Anopheles atroparvus
AATE003142
I
ACOM026748
Anopheles coluzzii
ACOM026748
I
ACYPI007601
Acyrthosiphon pisum
ACYPI007601
I
ADAC006988
Anopheles darlingi
ADAC006988
I
ADIR004737
Anopheles dirus
ADIR004737
I
AEPI011067
Anopheles epiroticus
AEPI011067
I
AFAF011447
Anopheles farauti
AFAF011447
I
Afo_R007066
Aptenodytes forsteri
Afo_R007066
I
ALUE_0000009401
Ascaris lumbricoides
ALUE_0000009401
I
AMEM000983
Anopheles merus
AMEM000983
I
AMIN006845
Anopheles minimus
AMIN006845
I
ANCCAN_05510
Ancylostoma caninum
ANCCAN_05510
I
ANCCEY_01724
Ancylostoma ceylanicum
ANCCEY_01724
I
AQUA005692
Anopheles quadriannulatus
AQUA005692
I
ASTEI11644
Anopheles stephensi
ASTEI11644
I
ASTEI11696
Anopheles stephensi
ASTEI11696
I
ASU_07884
Ascaris suum
ASU_07884
I
BGIBMGA002000
Bombyx mori
BGIBMGA002000
I
BGLB004019
Biomphalaria glabrata
BGLB004019
I
Bm4485
Brugia malayi
Bm4485
I
BTMF_0001091401
Brugia timori
BTMF_0001091401
I
BXY_0039800
Bursaphelenchus xylophilus
BXY_0039800
I
BXY_0327700
Bursaphelenchus xylophilus
BXY_0327700
I
CapteG171557
Capitella teleta
CapteG171557
I
CBG14155
Caenorhabditis briggsae
CBG14155
I
CBN22518
Caenorhabditis brenneri
CBN22518
I
CGI_10007932
Crassostrea gigas
CGI_10007932
I
CGI_10028920
Crassostrea gigas
CGI_10028920
I
CGOC_0000187501
Cylicostephanus goldi
CGOC_0000187501
I
CJA07370
Caenorhabditis japonica
CJA07370
I
CLEC025263
Cimex lectularius
CLEC025263
I
Cmyd_10012017
Chelonia mydas
Cmyd_10012017
I
CPIJ017334
Culex quinquefasciatus
CPIJ017334
I
CpipJ_CPIJ017334
Culex pipiens
CpipJ_CPIJ017334
I
CRE00427
Caenorhabditis remanei
CRE00427
I
csin100859
Clonorchis sinensis
csin100859
I
D917_05007
Trichinella nativa
D917_05007
I
D917_09121
Trichinella nativa
D917_09121
I
D918_07443
Trichuris suis
D918_07443
I
DAPPUDRAFT_106791
Daphnia pulex
DAPPUDRAFT_106791
I
DAPPUDRAFT_299738
Daphnia pulex
DAPPUDRAFT_299738
I
DICVIV_11193
Dictyocaulus viviparus
DICVIV_11193
I
ECPE_0000243601
Echinostoma caproni
ECPE_0000243601
I
EFV56045
Trichinella spiralis
EFV56045
I
EFV59616
Trichinella spiralis
EFV59616
I
NR2E3
Anolis carolinensis
ENSACAG00000011910
I
ENSAMEG00000008835
Ailuropoda melanoleuca
ENSAMEG00000008835
I
ENSAMXG00000017872
Astyanax mexicanus
ENSAMXG00000017872
I
NR2E3
Bos taurus
ENSBTAG00000014236
I
ENSBTAP00000048604-D1
Bos grunniens
ENSBTAP00000048604-D1
I
NR2E3
Callithrix jacchus
ENSCJAG00000018552
I
NR2E3
Cavia porcellus
ENSCPOG00000008974
I
ENSCSAG00000013721
Chlorocebus sabaeus
ENSCSAG00000013721
I
nr2e3
Danio rerio
ENSDARG00000045904
I
NR2E3
Equus caballus
ENSECAG00000015192
I
ENSFALG00000009699
Ficedula albicollis
ENSFALG00000009699
I
NR2E3
Felis catus
ENSFCAG00000031082
I
NR2E3
Homo sapiens
ENSG00000278570
D
nr2e3
Gasterosteus aculeatus
ENSGACG00000004739
I
NR2E3
Gasterosteus aculeatus
ENSGACG00000017060
I
NR2E3
Gallus gallus
ENSGALG00000002093
I
NR2E3
Gorilla gorilla
ENSGGOG00000004383
I
ENSGMOG00000008342
Gadus morhua
ENSGMOG00000008342
I
ENSGMOG00000019194
Gadus morhua
ENSGMOG00000019194
I
ENSLACG00000022378
Latimeria chalumnae
ENSLACG00000022378
I
NR2E3
Loxodonta africana
ENSLAFG00000021987
I
ENSLOCG00000014973
Lepisosteus oculatus
ENSLOCG00000014973
I
ENSMEUG00000016597
Macropus eugenii
ENSMEUG00000016597
I
NR2E3
Meleagris gallopavo
ENSMGAG00000001449
I
NR2E3
Myotis lucifugus
ENSMLUG00000008408
I
NR2E3
Macaca mulatta
ENSMMUG00000019276
I
NR2E3
Monodelphis domestica
ENSMODG00000001949
I
ENSMPUG00000017103
Mustela putorius furo
ENSMPUG00000017103
I
Nr2e3
Mus musculus
ENSMUSG00000032292
D
ENSNLEG00000013807
Nomascus leucogenys
ENSNLEG00000013807
I
ENSOARG00000018808
Ovis aries
ENSOARG00000018808
I
NR2E3
Otolemur garnettii
ENSOGAG00000006128
I
ENSONIG00000007109
Oreochromis niloticus
ENSONIG00000007109
I
ENSONIG00000015396
Oreochromis niloticus
ENSONIG00000015396
I
NR2E3
Ochotona princeps
ENSOPRG00000006427
I
NR2E3
Oryzias latipes
ENSORLG00000000011
I
nr2e3
Oryzias latipes
ENSORLG00000007175
I
ENSPANG00000016257
Papio anubis
ENSPANG00000016257
I
NR2E3
Procavia capensis
ENSPCAG00000014733
I
ENSPFOG00000006106
Poecilia formosa
ENSPFOG00000006106
I
ENSPFOG00000006516
Poecilia formosa
ENSPFOG00000006516
I
ENSPMAG00000009792
Petromyzon marinus
ENSPMAG00000009792
I
NR2E3
Pan troglodytes
ENSPTRG00000007242
I
NR2E3
Pteropus vampyrus
ENSPVAG00000009088
I
Nr2e3
Rattus norvegicus
ENSRNOG00000050690
I
NR2E3
Sus scrofa
ENSSSCG00000004978
I
ENSSTOG00000012080
Ictidomys tridecemlineatus
ENSSTOG00000012080
I
NR2E3
Tupaia belangeri
ENSTBEG00000011672
I
ENSTGUG00000004498
Taeniopygia guttata
ENSTGUG00000004498
I
NR2E3
Tetraodon nigroviridis
ENSTNIG00000005150
I
NR2E3
Takifugu rubripes
ENSTRUG00000015582
I
NR2E3
Tursiops truncatus
ENSTTRG00000009410
I
ENSXMAG00000010311
Xiphophorus maculatus
ENSXMAG00000010311
I
ENSXMAG00000015842
Xiphophorus maculatus
ENSXMAG00000015842
I
EVEC_0000564801
Enterobius vermicularis
EVEC_0000564801
I
e_gw.107.44.1
Branchiostoma floridae
e_gw.107.44.1
I
e_gw.324.28.1
Branchiostoma floridae
e_gw.324.28.1
I
Hr51
Drosophila melanogaster
FBgn0034012
D
GF13031
Drosophila ananassae
FBgn0090064
I
GH20426
Drosophila grimshawi
FBgn0127889
I
GI19610
Drosophila mojavensis
FBgn0142347
I
GL17752
Drosophila persimilis
FBgn0155355
I
GD11109
Drosophila simulans
FBgn0182865
I
GJ14974
Drosophila virilis
FBgn0202177
I
GK20892
Drosophila willistoni
FBgn0222886
I
GE13645
Drosophila yakuba
FBgn0231304
I
GA30480
Drosophila pseudoobscura
FBgn0264774
D
GB49738
Apis mellifera
GB49738
I
genemark-nMf.1.1.scaf00188-processed-gene-0.4
Meloidogyne floridensis
genemark-nMf.1.1.scaf00188-processed-gene-0.4
I
Gfo_R008863
Geospiza fortis
Gfo_R008863
I
GPLIN_000669800
Globodera pallida
GPLIN_000669800
I
Hba_15323
Heterorhabditis bacteriophora
Hba_15323
I
HCOI01781300
Haemonchus contortus
HCOI01781300
I
HelroG139475
Helobdella robusta
HelroG139475
I
HHAL007294-PA
Halyomorpha halys
HHAL007294-PA
I
HMEL012854
Heliconius melpomene
HMEL012854
I
Hsal_07902--XP_396999.3_APIME
Harpegnathos saltator
Hsal_07902--XP_396999.3_APIME
I
ISCW010891
Ixodes scapularis
ISCW010891
I
ISCW019467
Ixodes scapularis
ISCW019467
I
KGM_05606
Danaus plexippus
KGM_05606
I
KGM_21528
Danaus plexippus
KGM_21528
I
L596_g2163
Steinernema carpocapsae
L596_g2163
I
L798_02234
Zootermopsis nevadensis
L798_02234
I
L889_g11978
Steinernema feltiae
L889_g11978
I
L892_g9366
Steinernema scapterisci
L892_g9366
I
L893_g28297
Steinernema glaseri
L893_g28297
I
L898_g15355
Steinernema monticolum
L898_g15355
I
LCUP008516
Lucilia cuprina
LCUP008516
I
LDEC022044
Leptinotarsa decemlineata
LDEC022044
I
LLOJ002531
Lutzomyia longipalpis
LLOJ002531
I
LOAG_06205
Loa loa
LOAG_06205
I
LotgiG130367
Lottia gigantea
LotgiG130367
I
LotgiG137595
Lottia gigantea
LotgiG137595
I
MDOA010244
Musca domestica
MDOA010244
I
MhA1_Contig1792.frz3.gene6
Meloidogyne hapla
MhA1_Contig1792.frz3.gene6
I
Myotis_brandtii_NR2E3_10027281
Myotis brandtii
Myotis_brandtii_NR2E3_10027281
I
nAv.1.0.1.g01891
Acanthocheilonema viteae
nAv.1.0.1.g01891
I
nDi.2.2.2.g10236
Dirofilaria immitis
nDi.2.2.2.g10236
I
nLs.2.1.2.g01701
Litomosoides sigmodontis
nLs.2.1.2.g01701
I
nOo.2.0.1.g01040
Onchocerca ochengi
nOo.2.0.1.g01040
I
nOo.2.0.1.g10097
Onchocerca ochengi
nOo.2.0.1.g10097
I
nOo.2.0.1.g11611
Onchocerca ochengi
nOo.2.0.1.g11611
I
NV14480
Nasonia vitripennis
NV14480
I
OESDEN_00114
Oesophagostomum dentatum
OESDEN_00114
I
OFLC_0000991001
Onchocerca flexuosa
OFLC_0000991001
I
Ogr12843
Ophisaurus gracilis
Ogr12843
I
PHUM039420
Pediculus humanus
PHUM039420
I
PHUM331460
Pediculus humanus
PHUM331460
I
Ppa-fax-1
Pristionchus pacificus
PPA00264
I
Ppa-nhr-3
Pristionchus pacificus
PPA28597
I
PTRK_0000446300
Parastrongyloides trichosuri
PTRK_0000446300
I
Pvit_13689
Pogona vitticeps
Pvit_13689
I
RPRC002557
Rhodnius prolixus
RPRC002557
I
RPRC007025
Rhodnius prolixus
RPRC007025
I
RSKR_0000698500
Rhabditophanes kr3021
RSKR_0000698500
I
Sakowv30007027m.g
Saccoglossus kowalevskii
Sakowv30007027m.g
I
SBAD_0000006401
Soboliphyme baturini
SBAD_0000006401
I
scaffold296-EXSNAP2012.8
Pristionchus exspectatus
scaffold296-EXSNAP2012.8
I
scaffold395-EXSNAP2012.23
Pristionchus exspectatus
scaffold395-EXSNAP2012.23
I
SINV22628
Solenopsis invicta
SINV22628
I
SMAR005628
Strigamia maritima
SMAR005628
I
SMAR006008
Strigamia maritima
SMAR006008
I
Smp_167770
Schistosoma mansoni
Smp_167770
I
SMRZ_0000841101
Schistosoma margrebowiei
SMRZ_0000841101
I
SMTD_0001566201
Schistosoma mattheei
SMTD_0001566201
I
SMU15015045
Schmidtea mediterranea
SMU15015045
I
SMU15029049
Schmidtea mediterranea
SMU15029049
I
SMU15038222
Schmidtea mediterranea
SMU15038222
I
SMUV_0000230901
Syphacia muris
SMUV_0000230901
I
SMUV_0000245701
Syphacia muris
SMUV_0000245701
I
snap_masked-nMf.1.1.scaf29070-processed-gene-0.1
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf29070-processed-gene-0.1
I
SPAL_0001117000
Strongyloides papillosus
SPAL_0001117000
I
SPU_014405
Strongylocentrotus purpuratus
SPU_014405
I
SSTP_0000090600
Strongyloides stercoralis
SSTP_0000090600
I
SVE_0933400
Strongyloides venezuelensis
SVE_0933400
I
TC009378
Tribolium castaneum
TC009378
I
TCLT_0000456401
Thelazia callipaeda
TCLT_0000456401
I
TCNE_0001716001
Toxocara canis
TCNE_0001716001
I
TELCIR_21617
Teladorsagia circumcincta
TELCIR_21617
I
tetur01g11040
Tetranychus urticae
tetur01g11040
I
tetur08g01210
Tetranychus urticae
tetur08g01210
I
TRE_0000223201
Trichobilharzia regenti
TRE_0000223201
I
TTRE_0000600201
Trichuris trichiura
TTRE_0000600201
I
fax-1
Caenorhabditis elegans
WBGene00001400
I
WBGene00240517
Onchocerca volvulus
WBGene00240517
I
WUBG_05086
Wuchereria bancrofti
WUBG_05086
I
nr2e3
Xenopus tropicalis
XB-GENE-485801
I