ENSLACG00000016329 (Latimeria chalumnae)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSLACG00000016329 T186028_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Foxj1
M00161_2.00 		Mus musculus
NNHAAACAAANN
NNTTTGTTTDNN		 PBM
Badis et al.(2009)
Foxj1_3125 		0.847 0.860
FOXJ1
M10547_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HFH4_01 		0.847 0.860
FOXJ3
M03046_2.00 		Homo sapiens
RTAAAVAA
TTBTTTAY		 SELEX
Jolma et al.(2013)
FOXJ3_1 		0.674 0.616
FOXJ3
M03047_2.00 		Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_2 		0.674 0.616
FOXJ3
M03048_2.00 		Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_3 		0.674 0.616
FOXJ3
M02736_2.00 		Homo sapiens
AAACAATAAACA
TGTTTATTGTTT		 SELEX
Jolma et al.(2010)
FOXJ3_dimer 		0.674 0.616
FOXJ3
M02737_2.00 		Homo sapiens
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2010)
FOXJ3_monomer 		0.674 0.616
FOXJ3
M04859_2.00 		Homo sapiens
DYGTMAACAH
DTGTTKACRH		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX 		0.674 0.616
FOXJ3
M09098_2.00 		Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A 		0.674 0.616
FOXJ3
M04860_2.00 		Homo sapiens
RYGTMAACAH
DTGTTKACRY		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX 		0.674 0.616
Foxj3
M00160_2.00 		Mus musculus
NRTAAACAHN
NDTGTTTAYN		 PBM
Badis et al.(2009)
Foxj3_0982 		0.674 0.616
Foxj3
M01981_2.00 		Mus musculus
VNHHAYANN
NNTRTDDNB		 PBM
Weirauch et al.(2014)
pTH6591 		0.674 0.616
Foxj3
M03055_2.00 		Mus musculus
ACGGACACAAT
ATTGTGTCCGT		 SELEX
Jolma et al.(2013)
Foxj3_1 		0.674 0.616
Foxj3
M03056_2.00 		Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
Foxj3_2 		0.674 0.616
Foxj3
M03057_2.00 		Mus musculus
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_3 		0.674 0.616
Foxj3
M03058_2.00 		Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_4 		0.674 0.616
Foxj3
M09102_2.00 		Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A 		0.674 0.616
SPU_007644
M01987_2.00 		Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN		 PBM
Weirauch et al.(2014)
pTH6497 		0.671 0.651
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000018547 Forkhead 135 224

Links

Other Forkhead family TFs
Other Latimeria chalumnae TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A_05744 Schistosoma haematobium A_05744 N
BGLB013830 Biomphalaria glabrata BGLB013830 N
csin103376 Clonorchis sinensis csin103376 N
D915_15883 Fasciola hepatica D915_15883 N
D917_01243 Trichinella nativa D917_01243 N
D917_08464 Trichinella nativa D917_08464 N
DILT_0001977801 Diphyllobothrium latum DILT_0001977801 N
ECANG7_05376 Echinococcus canadensis ECANG7_05376 N
EmuJ_000113200 Echinococcus multilocularis EmuJ_000113200 N
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N
SMARCE1 Gasterosteus aculeatus ENSGACG00000018114 N
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I
GPLIN_000847800 Globodera pallida GPLIN_000847800 N
gw1.88.46.1 Fragilariopsis cylindrus gw1.88.46.1 N
HDID_0000207001 Hymenolepis diminuta HDID_0000207001 N
HelroG167700 Helobdella robusta HelroG167700 N
HmN_000301900 Hymenolepis microstoma HmN_000301900 N
LCUP018488 Lucilia cuprina LCUP018488 N
LotgiG111061 Lottia gigantea LotgiG111061 N
MCINX003696 Melitaea cinxia MCINX003696 N
MCOS_0000928101 Mesocestoides corti MCOS_0000928101 N
MDP0000242568 Malus domestica MDP0000242568 I
MLOC_68913 Hordeum vulgare MLOC_68913 N
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I
PDK_20s1781681g001 Phoenix dactylifera PDK_20s1781681g001 N
PXEA_0001727801 Protopolystoma xenopodis PXEA_0001727801 N
SBAD_0001127201 Soboliphyme baturini SBAD_0001127201 N
SCUD_0000923501 Schistosoma curassoni SCUD_0000923501 N
Sjc_0000110 Schistosoma japonicum Sjc_0000110 N
Smp_154640 Schistosoma mansoni Smp_154640 N
SMTD_0000014601 Schistosoma mattheei SMTD_0000014601 N
SMU15005679 Schmidtea mediterranea SMU15005679 N
SMU15025606 Schmidtea mediterranea SMU15025606 N
SROB_0000607501 Schistosoma rodhaini SROB_0000607501 N
SSLN_0001888901 Schistocephalus solidus SSLN_0001888901 N
SVUK_0000827101 Strongylus vulgaris SVUK_0000827101 N
T265_02983 Opisthorchis viverrini T265_02983 N
TASK_0000875901 Taenia asiatica TASK_0000875901 N
Traes_3DL_21C50DDF5 Triticum aestivum Traes_3DL_21C50DDF5 N
Traes_7AL_364A6E96F Triticum aestivum Traes_7AL_364A6E96F N
Traes_7BL_F45C15FA2 Triticum aestivum Traes_7BL_F45C15FA2 N
Traes_7DL_0CEFCB39D Triticum aestivum Traes_7DL_0CEFCB39D N
TsM_000047400 Taenia solium TsM_000047400 N